Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.0e-190 669.8 332 100.0
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 6.0e-114 414.8 345 60.6
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 3.0e-113 412.5 333 61.9
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 9.7e-112 407.5 334 61.4
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.3e-111 407.1 334 61.4
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 1.3e-111 407.1 332 62.7
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.8e-110 403.3 334 61.4
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 1.8e-110 403.3 334 61.4
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 5.9e-109 398.3 332 59.3
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 1.0e-108 397.5 333 59.5
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 1.0e-108 397.5 333 59.8
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.3e-108 397.1 338 59.2
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 1.2e-106 390.6 333 59.2
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 6.1e-106 388.3 333 58.3
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 6.1e-106 388.3 333 58.6
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.0e-105 387.5 334 59.3
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 5.1e-105 385.2 332 56.6
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 5.1e-105 385.2 332 56.9
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.9e-104 383.3 332 56.3
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 4.3e-104 382.1 333 58.6
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 5.7e-104 381.7 333 57.1
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.8e-103 379.4 334 57.2
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.8e-103 379.4 332 57.8
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 3.7e-103 379.0 334 57.5
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 1.1e-102 377.5 332 59.3
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.1e-102 377.5 332 59.3
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 1.1e-102 377.5 332 56.3
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 1.8e-102 376.7 333 57.1
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 2.4e-102 376.3 337 58.2
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 2.4e-102 376.3 337 57.9
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 3.1e-102 375.9 330 57.0
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 6.9e-102 374.8 334 58.1
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 2.0e-101 373.2 330 55.8
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 3.4e-101 372.5 330 54.8
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 5.9e-101 371.7 337 57.6
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 7.7e-101 371.3 332 59.0
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 1.3e-100 370.5 332 56.3
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.9e-100 369.4 301 59.5
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 2.9e-100 369.4 333 55.9
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.5e-100 367.9 340 58.2
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.5e-99 366.3 340 57.9
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 2.5e-99 366.3 337 56.7
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 3.2e-99 365.9 342 54.1
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 4.2e-99 365.5 330 55.2
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 4.2e-99 365.5 330 56.1
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.2e-98 364.0 332 55.1
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 2.7e-98 362.8 333 57.4
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 4.7e-98 362.1 330 55.5
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 6.1e-98 361.7 334 56.3
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 7.9e-98 361.3 334 53.9
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 1.0e-97 360.9 324 57.4
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.8e-97 360.1 332 54.2
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.9e-97 359.0 340 56.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 5.1e-97 358.6 332 54.2
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 6.7e-97 358.2 333 55.0
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 2.0e-96 356.7 334 54.8
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 2.0e-96 356.7 333 53.5
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 4.4e-96 355.5 336 54.5
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 4.4e-96 355.5 331 57.1
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 5.7e-96 355.1 329 54.1
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 2.2e-95 353.2 334 53.0
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 3.7e-95 352.4 332 53.0
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 1.1e-94 350.9 332 54.8
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 3.1e-94 349.4 333 52.0
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.5e-93 347.1 333 54.7
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.6e-93 346.3 348 50.9
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 5.9e-93 345.1 332 54.2
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 5.9e-93 345.1 333 56.2
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 7.7e-93 344.7 330 56.1
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 2.2e-92 343.2 338 55.3
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.2e-92 343.2 335 55.8
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 4.2e-91 339.0 336 53.0
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 5.5e-91 338.6 305 57.4
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.6e-90 337.0 335 54.6
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 6.1e-90 335.1 336 49.7
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 5.2e-89 332.0 300 56.0
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 8.8e-89 331.3 337 50.4
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 2.8e-87 326.2 336 49.7
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 8.2e-87 324.7 337 49.9
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 3.5e-85 319.3 274 58.0
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 4.5e-85 318.9 382 47.4
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.0e-84 317.8 296 53.0
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.0e-84 317.8 321 51.7
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 2.5e-83 313.2 334 50.3
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.7e-82 308.9 337 49.9
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 8.0e-82 308.1 332 47.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.3e-81 306.6 332 47.9
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 3.0e-81 306.2 334 48.2
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 3.0e-81 306.2 334 48.2
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.0e-80 303.5 334 47.6
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 1.3e-79 300.8 333 47.4
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.7e-79 299.3 296 51.4
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 3.7e-79 299.3 335 49.9
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 7.7e-77 291.6 330 49.4
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 5.5e-75 285.4 336 49.1
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 3.6e-74 282.7 351 45.3
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 4.4e-72 275.8 268 54.5
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 6.3e-71 271.9 336 43.2
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 6.3e-71 271.9 342 44.7
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 1.2e-69 267.7 338 46.2
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 7.2e-67 258.5 387 37.7
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.6e-66 257.3 219 61.6
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 6.1e-66 255.4 262 53.1
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.4e-65 254.2 386 38.1
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.0e-57 228.0 183 62.3
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.6e-42 177.6 136 65.4
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 3.6e-42 176.4 171 53.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 3.1e-41 173.3 137 62.0
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 1.4e-38 164.5 101 77.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 1.9e-38 164.1 327 33.3
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 4.3e-35 152.9 138 55.8
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 6.8e-33 145.6 200 42.5
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 3.9e-28 129.8 117 53.8
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 5.6e-27 125.9 106 61.3
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 2.2e-23 114.0 139 46.0
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 2.7e-21 107.1 104 48.1
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 4.6e-21 106.3 90 57.8
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 4.8e-18 96.3 321 26.8
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 1.1e-17 95.1 146 42.5
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 8.4e-15 85.5 64 65.6
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 3.9e-12 76.6 104 44.2
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.9e-11 74.3 125 32.8
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 6.2e-10 69.3 70 51.4
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 5.3e-09 66.2 47 59.6
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 7.6e-08 62.4 49 61.2


User provided reference genes

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