Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 5.9e-294 1013.4 506 100.0
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 5.6e-196 688.0 514 69.3
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 1.3e-189 666.8 512 66.8
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.3e-187 660.2 509 65.6
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 3.8e-184 648.7 512 65.2
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 1.4e-183 646.7 512 65.4
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 9.3e-183 644.0 507 65.1
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 4.6e-182 641.7 431 72.4
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 6.1e-182 641.3 470 67.2
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 1.0e-181 640.6 470 67.2
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 6.7e-181 637.9 435 71.3
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.1e-180 637.1 431 71.0
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 2.5e-180 636.0 431 71.0
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 1.4e-178 630.2 451 67.4
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.8e-178 629.8 532 61.7
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 6.9e-178 627.9 434 70.5
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 1.7e-176 623.2 431 70.5
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 6.5e-176 621.3 522 63.4
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 8.5e-176 620.9 485 64.1
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 3.2e-175 619.0 496 64.3
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 7.2e-175 617.8 511 62.0
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 3.6e-174 615.5 523 61.4
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 6.1e-174 614.8 517 62.3
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 3.0e-173 612.5 514 62.5
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 3.0e-173 612.5 519 63.2
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 3.9e-173 612.1 480 63.8
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 6.7e-173 611.3 487 63.4
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 8.8e-173 610.9 478 63.8
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 1.1e-172 610.5 511 61.4
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 1.5e-172 610.1 385 76.6
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 2.0e-172 609.8 472 65.0
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 3.3e-172 609.0 511 63.4
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 1.4e-170 603.6 465 65.4
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 5.3e-170 601.7 466 63.9
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 1.2e-169 600.5 440 68.9
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 1.5e-169 600.1 460 65.0
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 4.5e-169 598.6 512 61.7
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 1.1e-167 594.0 501 61.5
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.1e-167 594.0 496 63.3
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 1.1e-167 594.0 390 73.3
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.4e-167 593.6 531 59.3
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.2e-166 590.5 481 62.8
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.7e-166 589.3 517 61.5
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 2.7e-166 589.3 494 63.0
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 3.6e-166 589.0 517 61.5
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 3.6e-166 589.0 505 61.6
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 4.7e-166 588.6 510 59.8
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 6.1e-166 588.2 442 67.0
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 7.9e-166 587.8 512 61.1
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.0e-165 587.4 517 61.1
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 2.3e-165 586.3 517 61.3
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 2.3e-165 586.3 552 57.2
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.1e-165 585.1 517 61.3
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 1.1e-164 583.9 438 67.1
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 1.5e-164 583.6 517 61.1
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 3.3e-164 582.4 509 59.5
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 4.4e-164 582.0 516 60.1
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 7.4e-164 581.3 510 60.0
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 2.2e-163 579.7 514 59.3
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 2.2e-163 579.7 488 61.3
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 2.8e-163 579.3 493 60.4
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 2.8e-163 579.3 488 61.9
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 4.8e-163 578.6 483 61.9
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 1.8e-162 576.6 456 64.7
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 4.1e-162 575.5 440 65.0
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 4.1e-162 575.5 521 57.2
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.3e-162 575.1 509 61.1
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 9.1e-162 574.3 445 64.0
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 5.9e-161 571.6 438 66.0
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.3e-160 570.5 433 65.6
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 4.2e-159 565.5 527 58.4
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.5e-159 565.1 560 56.4
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 9.4e-159 564.3 497 60.0
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 2.1e-158 563.1 445 63.6
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 2.7e-158 562.8 432 64.1
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 2.7e-158 562.8 432 64.1
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 4.0e-157 558.9 438 64.6
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 5.2e-157 558.5 434 64.3
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 9.7e-156 554.3 488 60.0
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 8.2e-155 551.2 462 61.5
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 1.6e-153 547.0 451 60.8
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 3.8e-152 542.3 436 61.5
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 8.5e-152 541.2 373 69.2
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 1.1e-151 540.8 530 56.8
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.2e-150 537.3 450 60.0
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 1.6e-150 537.0 462 60.4
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 2.1e-150 536.6 416 63.9
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 8.0e-150 534.6 549 53.9
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 4.5e-145 518.8 521 55.3
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 7.7e-145 518.1 470 58.3
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 3.8e-144 515.8 465 58.7
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 3.2e-143 512.7 510 55.5
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 1.8e-141 506.9 385 65.7
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 5.7e-140 501.9 705 43.3
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.3e-139 500.7 440 58.9
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 3.6e-118 429.5 335 62.4
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 2.0e-116 423.7 255 76.1
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 1.9e-98 364.0 239 72.8
Peaxi162Scf00103g00911 Petunia axillaris HOM05D006344 ORTHO05D007744 2.1e-89 334.0 192 79.2
Solyc10g037890.3 Solanum lycopersicum HOM05D006344 ORTHO05D007744 1.6e-81 307.8 183 78.1
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 5.1e-80 302.8 317 51.7
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 4.3e-79 299.7 314 52.9
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 1.8e-77 294.3 485 36.5
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.8e-76 289.3 317 50.5
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 2.9e-75 287.0 312 51.9
SEGI_37248 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 3.3e-71 273.5 222 54.5
PGSC0003DMG400003447 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.3e-70 271.6 163 76.1
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.3e-63 246.9 576 30.6
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 2.8e-62 243.8 622 31.0
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 3.1e-53 213.8 453 30.9
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 5.3e-45 186.4 254 45.7
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 3.3e-39 167.2 368 30.4
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 2.8e-38 164.1 118 72.9
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.2e-36 158.7 218 44.0
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 2.9e-27 127.5 108 56.5
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 5.5e-26 123.2 108 55.6
Actinidia26517 Actinidia chinensis HOM05D006344 ORTHO05D007744 3.4e-23 114.0 60 80.0
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 6.6e-19 99.8 149 41.6
CDE06G0422 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 2.1e-17 94.7 58 70.7
CBR_g48168 Chara braunii HOM05D006344 ORTHO05D007744 3.0e-16 90.9 156 34.6
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 3.7e-14 84.0 79 59.5
Cre16.g684900 Chlamydomonas reinhardtii HOM05D006344 ORTHO05D007744 2.4e-13 81.3 275 25.8
BcaB08g35012 Brassica carinata HOM05D006344 ORTHO05D007744 4.7e-09 67.0 39 71.8
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 1.4e-08 65.5 94 37.2
HanXRQChr01g0015371 Helianthus annuus HOM05D000263 ORTHO05D000213 6.8e-08 63.2 41 68.3
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 9.8e-07 59.3 79 45.6


User provided reference genes

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