Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02634 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.8e-156 555.8 277 100.0
Aqoxy5G03390 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.6e-134 482.3 250 96.0
Aqoxy3G03726 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 1.4e-132 476.5 250 94.8
Aqoxy4G00762 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 2.6e-118 429.1 250 88.0
arahy.Tifrunner.gnm1.ann1.VWCB5J Arachis hypogaea HOM05D004937 ORTHO05D006414 1.8e-39 167.2 152 55.3
arahy.Tifrunner.gnm1.ann1.L1792D Arachis hypogaea HOM05D004937 ORTHO05D006414 9.1e-39 164.9 152 54.6
Manes.16G005800 Manihot esculenta HOM05D004937 ORTHO05D006414 1.2e-38 164.5 152 54.6
VMungo1215G2760 Vigna mungo HOM05D004937 ORTHO05D006414 5.9e-38 162.2 161 51.6
Nn1g07169 Nelumbo nucifera HOM05D004937 ORTHO05D006414 2.2e-37 160.2 167 50.9
Gohir.A06G207300 Gossypium hirsutum HOM05D004937 ORTHO05D006414 6.5e-37 158.7 168 50.6
Phvul.003G080000 Phaseolus vulgaris HOM05D004937 ORTHO05D006414 8.5e-37 158.3 153 51.6
Gohir.D06G214000 Gossypium hirsutum HOM05D004937 ORTHO05D006414 1.1e-36 157.9 168 50.6
Gorai.010G252100 Gossypium raimondii HOM05D004937 ORTHO05D006414 1.1e-36 157.9 168 50.6
Glyma.17G012400 Glycine max HOM05D004937 ORTHO05D006414 1.9e-36 157.1 166 48.8
Eucgr.D01342 Eucalyptus grandis HOM05D004937 ORTHO05D006414 4.2e-36 156.0 201 42.3
vmacro15793 Vaccinium macrocarpon HOM05D004937 ORTHO05D006414 4.2e-36 156.0 166 51.8
Thecc.06G222700 Theobroma cacao HOM05D004937 ORTHO05D006414 5.5e-36 155.6 153 52.9
Ca_21076_v3 Cicer arietinum L. HOM05D004937 ORTHO05D006414 9.4e-36 154.8 194 44.8
Lalb_Chr12g0196051 Lupinus albus HOM05D004937 ORTHO05D006414 9.4e-36 154.8 200 43.5
Psat4g006200 Pisum sativum HOM05D004937 ORTHO05D006414 9.4e-36 154.8 152 53.9
QL05p072835 Quercus lobata HOM05D004937 ORTHO05D006414 9.4e-36 154.8 152 53.9
Haze_06813 Corylus avellana HOM05D004937 ORTHO05D006414 2.1e-35 153.7 154 52.6
TWI63G0901 Tripterygium wilfordii HOM05D004937 ORTHO05D006414 2.1e-35 153.7 203 45.8
Lj1A1232T94 Lonicera japonica HOM05D004937 ORTHO05D006414 3.6e-35 152.9 151 53.0
Rhsim02G0106300 Rhododendron simsii HOM05D004937 ORTHO05D006414 3.6e-35 152.9 202 45.0
CSS0033735 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 4.7e-35 152.5 160 52.5
Prupe.4G019000 Prunus persica HOM05D004937 ORTHO05D006414 4.7e-35 152.5 153 53.6
TPR.G22185 Trifolium pratense HOM05D004937 ORTHO05D006414 6.1e-35 152.1 156 51.9
Aqoxy1G02086 Aquilegia oxysepala HOM05D004937 ORTHO05D006414 8.0e-35 151.8 146 52.1
GSVIVG01012711001 Vitis vinifera HOM05D004937 ORTHO05D000904 5.2e-34 149.1 153 51.6
Ciclev10014440m.g Citrus clementina HOM05D004937 ORTHO05D006414 8.8e-34 148.3 160 49.4
COL.COLO4_31792 Corchorus olitorius HOM05D004937 ORTHO05D006414 8.8e-34 148.3 167 49.1
Sabra04G0005400 Salix brachista HOM05D004937 ORTHO05D006414 8.8e-34 148.3 151 51.7
Potri.004G010400 Populus trichocarpa HOM05D004937 ORTHO05D006414 1.2e-33 147.9 151 51.7
CiPaw.09G093200 Carya illinoinensis HOM05D004937 ORTHO05D006414 1.5e-33 147.5 152 50.7
Glyma.07G261700 Glycine max HOM05D004937 ORTHO05D006414 2.0e-33 147.1 166 46.4
MD10G1323300 Malus domestica HOM05D004937 ORTHO05D006414 2.0e-33 147.1 152 50.7
Cc09_g01540 Coffea canephora HOM05D004937 ORTHO05D000904 2.6e-33 146.7 184 42.9
PSO541G5924 Papaver somniferum HOM05D004937 ORTHO05D006414 2.6e-33 146.7 155 51.0
TAR624G0274 Trochodendron aralioides HOM05D004937 ORTHO05D006414 2.6e-33 146.7 161 49.1
CANSAT56G3877 Cannabis sativa HOM05D004937 ORTHO05D006414 3.3e-33 146.4 153 50.3
Medtr4g132300 Medicago truncatula HOM05D004937 ORTHO05D006414 3.3e-33 146.4 153 51.6
PGR042G1615 Punica granatum HOM05D004937 ORTHO05D006414 3.3e-33 146.4 153 51.0
DCAR_028195 Daucus carota HOM05D004937 ORTHO05D006414 4.4e-33 146.0 157 49.7
Aa31LG1G2970 Aethionema arabicum HOM05D004937 ORTHO05D006414 5.7e-33 145.6 161 48.4
PSO541G2704 Papaver somniferum HOM05D004937 ORTHO05D006414 5.7e-33 145.6 155 51.0
Lj4g0022599 Lotus japonicus HOM05D004937 ORTHO05D006414 7.5e-33 145.2 185 45.4
PSO675G1521 Papaver somniferum HOM05D004937 ORTHO05D006414 9.7e-33 144.8 155 50.3
Sc24g0000210 Simmondsia chinensis HOM05D004937 ORTHO05D006414 9.7e-33 144.8 158 47.5
THA.LOC104809500 Tarenaya hassleriana HOM05D004937 ORTHO05D006414 1.7e-32 144.1 157 48.4
Hund23457 Selenicereus undatus HOM05D004937 ORTHO05D006414 2.2e-32 143.7 171 43.9
SEGI_33731 Sequoiadendron giganteum HOM05D004937 ORTHO05D006414 2.2e-32 143.7 163 44.2
EL10Ac8g20076 Beta vulgaris HOM05D004937 ORTHO05D006414 6.3e-32 142.1 184 44.6
Cpa.g.sc152.26 Carica papaya HOM05D004937 ORTHO05D006414 8.2e-32 141.7 166 46.4
AL1G22990 Arabidopsis lyrata HOM05D004937 ORTHO05D006414 1.1e-31 141.4 150 48.7
AT1G11800 Arabidopsis thaliana HOM05D004937 ORTHO05D006414 1.1e-31 141.4 150 48.7
Carub.0001s1147 Capsella rubella HOM05D004937 ORTHO05D006414 1.1e-31 141.4 152 47.4
Potri.004G010900 Populus trichocarpa HOM05D004937 ORTHO05D006414 1.1e-31 141.4 167 48.5
RcHm_v2.0_Chr5g0002731 Rosa chinensis HOM05D004937 ORTHO05D006414 1.1e-31 141.4 166 47.6
PSO675G7903 Papaver somniferum HOM05D004937 ORTHO05D006414 1.8e-31 140.6 155 50.3
DCAR_024931 Daucus carota HOM05D004937 ORTHO05D006414 2.4e-31 140.2 163 47.2
FvH4_3g01860 Fragaria vesca HOM05D004937 ORTHO05D006414 3.1e-31 139.8 162 48.1
FAN21G0664 Fragaria x ananassa HOM05D004937 ORTHO05D006414 3.1e-31 139.8 162 48.1
Migut.M01330 Erythranthe guttata HOM05D004937 ORTHO05D000904 4.1e-31 139.4 247 36.8
BcaB08g37429 Brassica carinata HOM05D004937 ORTHO05D006414 5.3e-31 139.0 153 47.7
Peaxi162Scf00394g00019 Petunia axillaris HOM05D004937 ORTHO05D006414 5.3e-31 139.0 160 47.5
Thhalv10006713m.g Eutrema salsugineum HOM05D004937 ORTHO05D000904 7.0e-31 138.7 153 49.7
MSTRG.15996 Avicennia marina HOM05D004937 ORTHO05D006414 1.2e-30 137.9 150 46.7
A09p64340 Brassica napus HOM05D004937 ORTHO05D007797 2.0e-30 137.1 150 46.7
BraA09t41776Z Brassica rapa HOM05D004937 ORTHO05D006414 2.0e-30 137.1 150 46.7
Sed0026378 Sechium edule HOM05D004937 ORTHO05D006414 2.0e-30 137.1 160 45.0
QL05p072858 Quercus lobata HOM05D004937 ORTHO05D006414 2.7e-30 136.7 172 45.3
AUR62012723 Chenopodium quinoa HOM05D004937 ORTHO05D006414 4.5e-30 136.0 147 48.3
BcaC07g41758 Brassica carinata HOM05D004937 ORTHO05D006414 7.7e-30 135.2 153 45.1
AUR62021933 Chenopodium quinoa HOM05D004937 ORTHO05D006414 7.7e-30 135.2 147 48.3
Peaxi162Scf00307g01425 Petunia axillaris HOM05D004937 ORTHO05D006414 7.7e-30 135.2 159 46.5
SalBow8G2768 Salvia bowleyana HOM05D004937 ORTHO05D006414 7.7e-30 135.2 206 39.3
C08p47960 Brassica napus HOM05D004937 ORTHO05D006414 1.3e-29 134.4 150 45.3
BolC8t52333H Brassica oleracea HOM05D004937 ORTHO05D006414 1.3e-29 134.4 150 45.3
ECA236G0630 Erigeron canadensis HOM05D004937 ORTHO05D006414 1.3e-29 134.4 151 47.0
HanXRQChr15g0470651 Helianthus annuus HOM05D004937 ORTHO05D006414 1.3e-29 134.4 152 46.7
Sp1g10430 Schrenkiella parvula HOM05D004937 ORTHO05D006414 1.3e-29 134.4 153 47.7
CARHR012140 Cardamine hirsuta HOM05D004937 ORTHO05D006414 1.7e-29 134.0 153 47.7
Sopen02g011270 Solanum pennellii HOM05D004937 ORTHO05D006414 1.7e-29 134.0 165 43.0
Lsat_1_v5_gn_7_16360 Lactuca sativa HOM05D004937 ORTHO05D006414 3.8e-29 132.9 152 46.7
Nitab4.5_0000005g0300 Nicotiana tabacum HOM05D004937 ORTHO05D006414 3.8e-29 132.9 167 45.5
Haze_06812 Corylus avellana HOM05D004937 ORTHO05D006414 5.0e-29 132.5 154 50.6
SMO361G0593 Selaginella moellendorffii HOM05D004937 ORTHO05D006414 5.0e-29 132.5 151 44.4
Solyc02g032870.4 Solanum lycopersicum HOM05D004937 ORTHO05D006414 5.0e-29 132.5 165 43.0
PGSC0003DMG400019871 Solanum tuberosum HOM05D004937 ORTHO05D006414 5.0e-29 132.5 165 43.0
HPP92_001597 Vanilla planifolia HOM05D004937 ORTHO05D006414 5.0e-29 132.5 184 40.2
HPP92_014181 Vanilla planifolia HOM05D004937 ORTHO05D006414 5.0e-29 132.5 260 37.3
Nitab4.5_0011734g0010 Nicotiana tabacum HOM05D004937 ORTHO05D006414 6.5e-29 132.1 167 44.9
PSO017G1772 Papaver somniferum HOM05D004937 ORTHO05D006414 6.5e-29 132.1 154 46.1
MELO3C002448.2 Cucumis melo HOM05D004937 ORTHO05D006414 8.5e-29 131.7 159 45.3
Os12g0414900 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 2.5e-28 130.2 153 43.8
Pp3c20_16850 Physcomitrium patens HOM05D004937 ORTHO05D006414 3.2e-28 129.8 150 43.3
Dinv20060 Davidia involucrata HOM05D004937 ORTHO05D006414 4.2e-28 129.4 166 45.2
CsaV3_1G010670 Cucumis sativus L. HOM05D004937 ORTHO05D006414 5.5e-28 129.0 160 43.8
HanXRQChr05g0129391 Helianthus annuus HOM05D004937 ORTHO05D006414 5.5e-28 129.0 155 46.5
HPP92_001591 Vanilla planifolia HOM05D004937 ORTHO05D006414 7.2e-28 128.6 184 39.1
ATR0794G089 Amborella trichopoda HOM05D004937 ORTHO05D006414 1.2e-27 127.9 157 41.4
Mapoly0028s0073 Marchantia polymorpha HOM05D004937 ORTHO05D006414 1.6e-27 127.5 164 41.5
Dinv13907 Davidia involucrata HOM05D004937 ORTHO05D006414 4.7e-27 125.9 150 42.7
unitig_748.g7590 Utricularia gibba HOM05D004937 ORTHO05D006414 6.1e-27 125.6 199 37.7
Zm00001eb043220 Zea mays HOM05D004937 ORTHO05D006414 6.1e-27 125.6 147 42.9
QL05p072840 Quercus lobata HOM05D004937 ORTHO05D006414 3.4e-25 119.8 154 45.5
AagrBONN_evm.TU.Sc2ySwM_368.2060 Anthoceros agrestis HOM05D004937 ORTHO05D006414 5.7e-25 119.0 138 42.8
Psat6g178560 Pisum sativum HOM05D004937 ORTHO05D006414 9.8e-25 118.2 131 48.9
Hma1.2p1_3370F.1_g335650 Hydrangea macrophylla HOM05D004937 ORTHO05D006414 1.7e-21 107.5 141 44.0
CBR_g38366 Chara braunii HOM05D004937 ORTHO05D006414 3.8e-21 106.3 170 36.5
Ah.14g087960 Amaranthus hybridus HOM05D004937 ORTHO05D006414 1.5e-20 104.4 149 42.3
Migut.M01331 Erythranthe guttata HOM05D004937 ORTHO05D006414 9.5e-20 101.7 152 40.8
Sed0013617 Sechium edule HOM05D004937 ORTHO05D006414 5.2e-18 95.9 119 44.5
BcaB08g37428 Brassica carinata HOM05D004937 ORTHO05D006414 2.6e-17 93.6 71 57.7
Dinv13904 Davidia involucrata HOM05D004937 ORTHO05D006414 4.4e-17 92.8 65 64.6
ClCG03G004650 Citrullus lanatus HOM05D000020 ORTHO05D000904 4.9e-16 89.4 91 47.3
CDE02G2441 Ceratophyllum demersum HOM05D004937 ORTHO05D006414 3.8e-13 79.7 150 34.7
SHI02217 Sapria himalayana HOM05D004937 ORTHO05D006414 6.6e-13 79.0 206 30.1
Os10g0401100 Oryza sativa ssp. japonica HOM05D004937 ORTHO05D006414 5.7e-09 65.9 54 53.7
Cre06.g305050 Chlamydomonas reinhardtii HOM05D004937 ORTHO05D006414 1.4e-07 61.2 166 31.9
Dinv13906 Davidia involucrata HOM05D004937 ORTHO05D006414 2.4e-07 60.5 53 54.7
PSO832G4260 Papaver somniferum HOM05D004937 ORTHO05D002819 7.0e-07 58.9 61 44.3
Dinv30719 Davidia involucrata HOM05D004937 ORTHO05D006414 1.2e-06 58.2 97 38.1
CSS0048087 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 2.7e-06 57.0 225 27.6
MCO11G820 Micromonas commoda HOM05D004937 ORTHO05D006414 3.5e-06 56.6 164 28.0
CSS0029720 Camellia sinensis var. sinensis HOM05D004937 ORTHO05D006414 5.9e-06 55.8 225 28.0


User provided reference genes

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