Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.6e-43 179.1 93 100.0
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 4.1e-36 154.5 89 86.5
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 7.0e-36 153.7 92 83.7
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 9.2e-36 153.3 91 84.6
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 9.2e-36 153.3 89 86.5
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 1.6e-35 152.5 92 82.6
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 2.0e-35 152.1 92 82.6
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 2.0e-35 152.1 92 82.6
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 2.7e-35 151.8 92 82.6
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 3.5e-35 151.4 89 85.4
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.6e-35 151.0 87 87.4
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 4.6e-35 151.0 87 87.4
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 6.0e-35 150.6 85 88.2
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 7.8e-35 150.2 92 81.5
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 7.8e-35 150.2 92 82.6
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 7.8e-35 150.2 92 82.6
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 7.8e-35 150.2 92 82.6
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 7.8e-35 150.2 92 82.6
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 1.0e-34 149.8 86 87.2
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.3e-34 149.4 92 81.5
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.7e-34 149.1 92 81.5
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.7e-34 149.1 92 81.5
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 1.7e-34 149.1 92 78.3
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 3.0e-34 148.3 87 83.9
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 3.0e-34 148.3 92 80.4
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 3.0e-34 148.3 92 79.3
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 3.0e-34 148.3 88 85.2
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 3.9e-34 147.9 90 85.6
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 3.9e-34 147.9 92 78.3
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 5.0e-34 147.5 89 83.1
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 5.0e-34 147.5 90 81.1
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 5.0e-34 147.5 90 81.1
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 5.0e-34 147.5 90 81.1
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 5.0e-34 147.5 92 80.4
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 6.6e-34 147.1 86 83.7
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 6.6e-34 147.1 92 77.2
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 6.6e-34 147.1 92 78.3
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 8.6e-34 146.7 91 81.3
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 8.6e-34 146.7 92 79.3
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 8.6e-34 146.7 87 81.6
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 8.6e-34 146.7 90 80.0
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 8.6e-34 146.7 92 78.3
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.1e-33 146.4 89 84.3
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 1.1e-33 146.4 88 83.0
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 1.5e-33 146.0 90 84.4
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 1.5e-33 146.0 92 79.3
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 1.5e-33 146.0 87 81.6
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 1.9e-33 145.6 91 78.0
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 2.5e-33 145.2 90 84.4
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 2.5e-33 145.2 92 79.3
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 2.5e-33 145.2 90 82.2
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 3.3e-33 144.8 91 78.0
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 3.3e-33 144.8 92 77.2
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 3.3e-33 144.8 91 79.1
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 4.3e-33 144.4 87 81.6
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 5.6e-33 144.1 90 82.2
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 9.5e-33 143.3 92 76.1
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 9.5e-33 143.3 92 76.1
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 9.5e-33 143.3 88 80.7
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 1.2e-32 142.9 92 79.3
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 1.2e-32 142.9 93 79.6
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 1.6e-32 142.5 92 78.3
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.1e-32 142.1 88 80.7
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.1e-32 142.1 91 78.0
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 2.1e-32 142.1 91 76.9
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 2.8e-32 141.7 91 76.9
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 2.8e-32 141.7 90 77.8
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 1.8e-31 139.0 86 81.4
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.8e-31 139.0 89 79.8
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 2.3e-31 138.7 91 75.8
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 3.1e-31 138.3 90 80.0
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 80.2
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 80.2
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 3.1e-31 138.3 86 80.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 3.1e-31 138.3 89 78.7
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 4.0e-31 137.9 87 82.8
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 5.2e-31 137.5 99 75.8
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 6.8e-31 137.1 91 76.9
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 8.9e-31 136.7 86 79.1
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 8.9e-31 136.7 86 79.1
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 1.2e-30 136.3 87 80.5
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 1.5e-30 136.0 91 75.8
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 2.6e-30 135.2 91 74.7
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 3.4e-30 134.8 93 75.3
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 5.8e-30 134.0 83 79.5
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 7.5e-30 133.7 88 76.1
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 7.5e-30 133.7 88 76.1
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.3e-29 132.9 91 71.4
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 6.4e-29 130.6 91 72.5
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.4e-28 129.4 83 75.9
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 1.2e-27 126.3 93 68.8
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 2.7e-27 125.2 81 75.3
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 1.0e-26 123.2 75 84.0
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.3e-26 122.9 92 69.6
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 5.1e-26 120.9 150 49.3
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 8.6e-26 120.2 93 71.0
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 1.1e-25 119.8 65 90.8
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 1.5e-25 119.4 74 82.4
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 1.9e-25 119.0 83 72.3
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 3.3e-25 118.2 64 90.6
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 4.3e-25 117.9 70 85.7
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 4.3e-25 117.9 70 84.3
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 5.6e-25 117.5 71 81.7
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 7.3e-25 117.1 78 76.9
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 2.8e-24 115.2 71 81.7
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 4.7e-24 114.4 71 78.9
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 1.4e-23 112.8 71 81.7
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 4.0e-23 111.3 77 72.7
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 4.4e-22 107.8 71 77.5
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 5.8e-22 107.5 73 74.0
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 6.4e-21 104.0 62 82.3
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 2.4e-20 102.1 86 62.8
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 1.6e-19 99.4 80 63.8
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 5.1e-18 94.4 79 58.2
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 1.5e-17 92.8 69 68.1
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 2.5e-17 92.0 108 52.8
SalBow3G3879 Salvia bowleyana HOM05D002854 ORTHO05D003051 2.6e-06 55.5 95 40.0


User provided reference genes

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