Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02600 Aquilegia oxysepala HOM05D006103 ORTHO05D007468 2.4e-157 558.9 309 100.0
TAR375G0262 Trochodendron aralioides HOM05D006103 ORTHO05D007468 2.0e-103 379.8 311 70.7
CSS0016826 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.5e-98 362.8 315 68.9
CiPaw.11G084400 Carya illinoinensis HOM05D006103 ORTHO05D007468 3.3e-98 362.5 324 65.7
Dinv25153 Davidia involucrata HOM05D006103 ORTHO05D007468 1.6e-97 360.1 307 67.4
CSS0027189 Camellia sinensis var. sinensis HOM05D006103 ORTHO05D007468 2.1e-97 359.8 307 71.0
CANSAT21G0053 Cannabis sativa HOM05D006103 ORTHO05D007468 1.8e-96 356.7 313 68.7
Atru.chr9.1156 Acer truncatum HOM05D006103 ORTHO05D007468 5.8e-95 351.7 309 68.0
Haze_08348 Corylus avellana HOM05D006103 ORTHO05D007468 7.6e-95 351.3 323 65.3
PSO063G5173 Papaver somniferum HOM05D006103 ORTHO05D007468 1.3e-94 350.5 319 64.3
MBI04_g46823_MAGBIO Magnolia biondii HOM05D006103 ORTHO05D007468 6.5e-94 348.2 313 65.8
QL12p008443 Quercus lobata HOM05D006103 ORTHO05D007468 1.4e-93 347.1 311 65.9
Duzib205G0801 Durio zibethinus HOM05D006103 ORTHO05D007468 3.2e-93 345.9 309 67.6
Sabra01G0119800 Salix brachista HOM05D006103 ORTHO05D007468 1.6e-92 343.6 309 66.7
Lj8A286T53 Lonicera japonica HOM05D006103 ORTHO05D007468 2.7e-92 342.8 314 65.3
Potri.001G149800 Populus trichocarpa HOM05D006103 ORTHO05D007468 3.5e-92 342.4 310 64.5
PGR042G3635 Punica granatum HOM05D006103 ORTHO05D007468 6.1e-92 341.7 319 65.2
Actinidia03414 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.9e-91 339.0 309 64.1
CsaV3_3G002190 Cucumis sativus L. HOM05D006103 ORTHO05D007468 3.9e-91 339.0 332 62.3
ClCG10G002100 Citrullus lanatus HOM05D006103 ORTHO05D007468 2.5e-90 336.3 325 64.0
Thecc.03G237900 Theobroma cacao HOM05D006103 ORTHO05D007468 2.5e-90 336.3 320 65.9
MSTRG.13771 Avicennia marina HOM05D006103 ORTHO05D007468 3.3e-90 335.9 306 61.4
Prupe.5G053300 Prunus persica HOM05D006103 ORTHO05D007468 4.3e-90 335.5 328 60.7
FAN08G0488 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.4e-90 334.7 319 63.3
Gohir.D08G182200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 2.8e-89 332.8 311 65.6
Gorai.004G191100 Gossypium raimondii HOM05D006103 ORTHO05D007468 2.8e-89 332.8 315 64.1
Lsat_1_v5_gn_6_94780 Lactuca sativa HOM05D006103 ORTHO05D007468 4.8e-89 332.0 307 64.2
Eucgr.E00334 Eucalyptus grandis HOM05D006103 ORTHO05D007468 6.3e-89 331.6 340 60.3
Lj8C280G0 Lonicera japonica HOM05D006103 ORTHO05D007468 6.3e-89 331.6 307 58.3
MD04G1054200 Malus domestica HOM05D006103 ORTHO05D007468 6.3e-89 331.6 338 58.9
Manes.17G024600 Manihot esculenta HOM05D006103 ORTHO05D007468 8.2e-89 331.3 310 64.2
Oeu054287.1 Olea europaea HOM05D006103 ORTHO05D007468 8.2e-89 331.3 323 63.2
RcHm_v2.0_Chr7g0206421 Rosa chinensis HOM05D006103 ORTHO05D007468 8.2e-89 331.3 328 60.4
Lalb_Chr16g0386381 Lupinus albus HOM05D006103 ORTHO05D007468 1.4e-88 330.5 310 63.2
Ciclev10021261m.g Citrus clementina HOM05D006103 ORTHO05D007468 1.8e-88 330.1 315 62.5
Cc08_g11160 Coffea canephora HOM05D006103 ORTHO05D007468 1.8e-88 330.1 319 62.7
MELO3C013891.2 Cucumis melo HOM05D006103 ORTHO05D007468 3.1e-88 329.3 339 60.2
Sed0003222 Sechium edule HOM05D006103 ORTHO05D007468 3.1e-88 329.3 326 61.0
FvH4_5g20690 Fragaria vesca HOM05D006103 ORTHO05D007468 4.1e-88 328.9 325 61.5
FAN18G2558 Fragaria x ananassa HOM05D006103 ORTHO05D007468 5.3e-88 328.6 326 61.3
arahy.Tifrunner.gnm1.ann1.GKQN4T Arachis hypogaea HOM05D006103 ORTHO05D007468 9.0e-88 327.8 317 63.4
Glyma.05G067000 Glycine max HOM05D006103 ORTHO05D007468 9.0e-88 327.8 310 64.5
Gohir.A08G162200 Gossypium hirsutum HOM05D006103 ORTHO05D007468 1.2e-87 327.4 316 63.9
VMungo0251G0880 Vigna mungo HOM05D006103 ORTHO05D007468 1.2e-87 327.4 311 63.7
HanXRQChr03g0089621 Helianthus annuus HOM05D006103 ORTHO05D007468 1.5e-87 327.0 307 63.2
FAN13G0941 Fragaria x ananassa HOM05D006103 ORTHO05D007468 5.9e-87 325.1 322 61.5
FAN04G1103 Fragaria x ananassa HOM05D006103 ORTHO05D007468 7.7e-87 324.7 319 63.3
Carub.0008s0066 Capsella rubella HOM05D006103 ORTHO05D007468 1.7e-86 323.6 309 66.0
Cpa.g.sc98.70 Carica papaya HOM05D006103 ORTHO05D007468 1.7e-86 323.6 320 57.2
AL8G11110 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 6.5e-86 321.6 308 63.3
Nitab4.5_0000506g0180 Nicotiana tabacum HOM05D006103 ORTHO05D007468 2.5e-85 319.7 322 60.9
Phvul.003G226000 Phaseolus vulgaris HOM05D006103 ORTHO05D007468 2.5e-85 319.7 316 62.7
TWI60G1123 Tripterygium wilfordii HOM05D006103 ORTHO05D007468 2.5e-85 319.7 308 61.4
Sp2g11900 Schrenkiella parvula HOM05D006103 ORTHO05D007468 5.5e-85 318.5 310 62.6
CAN.G422.12 Capsicum annuum HOM05D006103 ORTHO05D007468 1.2e-84 317.4 316 61.7
CDE02G1890 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 1.2e-84 317.4 309 57.9
PGSC0003DMG400026583 Solanum tuberosum HOM05D006103 ORTHO05D007468 3.6e-84 315.8 328 61.0
DCAR_004514 Daucus carota HOM05D006103 ORTHO05D007468 4.6e-84 315.5 324 60.2
Solyc06g060990.4 Solanum lycopersicum HOM05D006103 ORTHO05D007468 7.9e-84 314.7 322 61.2
Sopen06g021130 Solanum pennellii HOM05D006103 ORTHO05D007468 7.9e-84 314.7 322 61.5
AUR62007192 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.0e-83 314.3 309 56.0
BraA02t08094Z Brassica rapa HOM05D006103 ORTHO05D007468 1.4e-83 313.9 309 63.8
SGA_v2.0_scaffold20G09256 Striga asiatica HOM05D006103 ORTHO05D007468 1.4e-83 313.9 307 58.6
A02p30800 Brassica napus HOM05D006103 ORTHO05D007468 8.8e-83 311.2 309 63.4
CARHR174300 Cardamine hirsuta HOM05D006103 ORTHO05D007468 2.0e-82 310.1 308 55.5
Thhalv10000969m.g Eutrema salsugineum HOM05D006103 ORTHO05D007468 2.5e-82 309.7 308 60.7
AT5G47090 Arabidopsis thaliana HOM05D006103 ORTHO05D007468 4.3e-82 308.9 308 62.0
BcaC03g16934 Brassica carinata HOM05D006103 ORTHO05D007468 9.7e-82 307.8 309 62.8
C02p48360 Brassica napus HOM05D006103 ORTHO05D007468 1.3e-81 307.4 309 62.5
BolC2t10867H Brassica oleracea HOM05D006103 ORTHO05D007468 1.3e-81 307.4 309 62.5
Lj4g0004061 Lotus japonicus HOM05D006103 ORTHO05D007468 1.3e-81 307.4 328 58.8
unitig_699.g19773 Utricularia gibba HOM05D006103 ORTHO05D007468 3.7e-81 305.8 333 58.3
C02p28550 Brassica napus HOM05D006103 ORTHO05D007468 4.8e-81 305.4 308 59.4
BolC2t08897H Brassica oleracea HOM05D006103 ORTHO05D007468 4.8e-81 305.4 308 59.4
ECA240G1687 Erigeron canadensis HOM05D005140 ORTHO05D006288 8.2e-81 304.7 293 55.3
BcaC03g15262 Brassica carinata HOM05D006103 ORTHO05D007468 1.2e-79 300.8 308 58.8
Hund11307 Selenicereus undatus HOM05D006103 ORTHO05D007468 1.2e-79 300.8 265 66.0
Ca_22022_v3 Cicer arietinum L. HOM05D006103 ORTHO05D007468 7.7e-79 298.1 308 58.4
vmacro00388 Vaccinium macrocarpon HOM05D006103 ORTHO05D007468 5.0e-78 295.4 396 47.0
EL10Ac5g12236 Beta vulgaris HOM05D006103 ORTHO05D007468 1.9e-77 293.5 323 57.3
Migut.E01036 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.6e-76 289.3 310 54.8
Migut.E01310 Erythranthe guttata HOM05D006103 ORTHO05D007468 3.6e-76 289.3 310 54.8
Medtr4g099190 Medicago truncatula HOM05D006103 ORTHO05D007468 3.6e-76 289.3 318 57.2
SHI07660 Sapria himalayana HOM05D006103 ORTHO05D007468 3.6e-76 289.3 307 56.0
ATR0665G401 Amborella trichopoda HOM05D006103 ORTHO05D007468 3.9e-75 285.8 313 58.1
Dinv28889 Davidia involucrata HOM05D006103 ORTHO05D007468 5.7e-74 282.0 190 74.2
Aa31LG9G5870 Aethionema arabicum HOM05D006103 ORTHO05D007468 7.4e-74 281.6 353 54.7
CDE11G0859 Ceratophyllum demersum HOM05D006103 ORTHO05D007468 2.8e-73 279.6 262 60.7
Os06g0139700 Oryza sativa ssp. japonica HOM05D006103 ORTHO05D007468 1.8e-72 276.9 320 57.8
GSVIVG01013285001 Vitis vinifera HOM05D006103 ORTHO05D007468 3.1e-72 276.2 189 73.0
Zm00001eb377550 Zea mays HOM05D006103 ORTHO05D007468 1.6e-71 273.9 329 53.5
Sc22g0001160 Simmondsia chinensis HOM05D006103 ORTHO05D007468 1.3e-70 270.8 186 72.6
Peaxi162Scf00190g00616 Petunia axillaris HOM05D006103 ORTHO05D007468 5.5e-69 265.4 269 61.7
Rhsim04G0176100 Rhododendron simsii HOM05D006103 ORTHO05D007468 1.2e-68 264.2 265 62.3
SEGI_16450 Sequoiadendron giganteum HOM05D006103 ORTHO05D007468 1.2e-68 264.2 313 54.0
CANSAT21G0160 Cannabis sativa HOM05D001479 ORTHO05D007468 1.6e-68 263.8 193 69.9
CANSAT21G1035 Cannabis sativa HOM05D006103 ORTHO05D007468 4.7e-68 262.3 185 71.4
BcaC07g39778 Brassica carinata HOM05D006103 ORTHO05D007468 1.4e-64 250.8 308 55.2
Psat4g074520 Pisum sativum HOM05D006103 ORTHO05D007468 4.1e-64 249.2 308 48.1
Nitab4.5_0013289g0030 Nicotiana tabacum HOM05D006103 ORTHO05D007468 6.1e-60 235.3 238 63.0
TPR.G25737 Trifolium pratense HOM05D006103 ORTHO05D007468 8.8e-59 231.5 335 49.9
Hma1.2p1_1672F.1_g296810 Hydrangea macrophylla HOM05D006103 ORTHO05D007468 3.1e-56 223.0 221 62.4
Pp3c16_2730 Physcomitrium patens HOM05D006103 ORTHO05D007468 5.9e-55 218.8 325 47.1
HPP92_014398 Vanilla planifolia HOM05D006103 ORTHO05D007468 5.9e-55 218.8 190 57.9
AUR62018811 Chenopodium quinoa HOM05D006103 ORTHO05D007468 1.5e-50 204.1 203 53.2
SMO171G0121 Selaginella moellendorffii HOM05D006103 ORTHO05D007468 2.2e-49 200.3 315 43.8
BolC8t50609H Brassica oleracea HOM05D006103 ORTHO05D007468 5.0e-46 189.1 152 64.5
Lj8A284T15 Lonicera japonica HOM05D006103 ORTHO05D007468 4.9e-41 172.6 137 65.7
C08p30000 Brassica napus HOM05D006103 ORTHO05D007468 3.2e-40 169.9 138 64.5
AagrBONN_evm.TU.Sc2ySwM_368.2081 Anthoceros agrestis HOM05D006103 ORTHO05D007468 1.6e-39 167.5 311 37.0
CBR_g49667 Chara braunii HOM05D006103 ORTHO05D007468 1.0e-35 154.8 409 32.8
AL8G11000 Arabidopsis lyrata HOM05D006103 ORTHO05D007468 9.2e-32 141.7 153 64.1
SHI06573 Sapria himalayana HOM05D006103 ORTHO05D007468 3.2e-24 116.7 124 53.2
Actinidia02205 Actinidia chinensis HOM05D006103 ORTHO05D007468 3.5e-23 113.2 69 75.4
Cfa012348 Carpinus fangiana HOM05D006103 ORTHO05D007468 1.2e-20 104.8 83 60.2
MCO11G792 Micromonas commoda HOM05D006103 ORTHO05D007468 4.7e-20 102.8 315 27.3
Lj8A284T12 Lonicera japonica HOM05D006103 ORTHO05D007468 4.0e-19 99.8 141 46.8
SHI06574 Sapria himalayana HOM05D006103 ORTHO05D007468 3.4e-18 96.7 147 39.5
RcHm_v2.0_Chr4g0446321 Rosa chinensis HOM05D006103 ORTHO05D007468 9.9e-18 95.1 188 36.2
COL.COLO4_06694 Corchorus olitorius HOM05D006103 ORTHO05D007468 2.3e-14 84.0 79 54.4
Lj8C284T4 Lonicera japonica HOM05D006103 ORTHO05D007468 8.6e-14 82.0 55 65.5
RcHm_v2.0_Chr6g0308851 Rosa chinensis HOM05D006103 ORTHO05D007468 1.6e-12 77.8 54 70.4
Cre03.g170100 Chlamydomonas reinhardtii HOM05D006103 ORTHO05D007468 2.1e-12 77.4 144 36.8
Carub.0008s0069 Capsella rubella HOM05D006103 ORTHO05D007468 3.1e-11 73.6 54 70.4
CARHR174410 Cardamine hirsuta HOM05D006103 ORTHO05D007468 3.1e-11 73.6 44 77.3
Lj8A280T20 Lonicera japonica HOM05D006103 ORTHO05D007468 6.4e-09 65.9 45 73.3
Actinidia25920 Actinidia chinensis HOM05D006103 ORTHO05D007468 1.9e-08 64.3 75 50.7
Rhsim04G0176300 Rhododendron simsii HOM05D006103 ORTHO05D007468 2.3e-06 57.4 50 64.0


User provided reference genes

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