Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02546 Aquilegia oxysepala HOM05D007049 ORTHO05D008896 3.5e-40 167.9 89 100.0
PSO017G7166 Papaver somniferum HOM05D007049 ORTHO05D008896 2.0e-24 115.5 80 75.0
MELO3C022175.2 Cucumis melo HOM05D007049 ORTHO05D008896 1.0e-23 113.2 87 65.5
CsaV3_5G039970 Cucumis sativus L. HOM05D007049 ORTHO05D008896 1.0e-23 113.2 87 65.5
FAN18G1167 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.8e-23 111.3 77 71.4
FAN18G2563 Fragaria x ananassa HOM05D007049 ORTHO05D008896 3.8e-23 111.3 77 71.4
MD10G1006000 Malus domestica HOM05D007049 ORTHO05D008896 3.8e-23 111.3 83 67.5
Solyc09g007070.1 Solanum lycopersicum HOM05D007049 ORTHO05D008896 5.0e-23 110.9 77 71.4
Sopen09g001930 Solanum pennellii HOM05D007049 ORTHO05D008896 5.0e-23 110.9 77 71.4
FAN08G2573 Fragaria x ananassa HOM05D007049 ORTHO05D008896 6.5e-23 110.5 77 70.1
MBI13_g15314_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 6.5e-23 110.5 79 70.9
MBI13_g30327_MAGBIO Magnolia biondii HOM05D007049 ORTHO05D008896 6.5e-23 110.5 79 70.9
CAN.G4100.1 Capsicum annuum HOM05D007049 ORTHO05D008896 8.5e-23 110.2 77 70.1
CAN.G608.33 Capsicum annuum HOM05D007049 ORTHO05D008896 8.5e-23 110.2 77 70.1
Nitab4.5_0000213g0160 Nicotiana tabacum HOM05D007049 ORTHO05D008896 8.5e-23 110.2 76 72.4
PGSC0003DMG401002024 Solanum tuberosum HOM05D007049 ORTHO05D008896 8.5e-23 110.2 77 70.1
CANSAT25G3584 Cannabis sativa HOM05D007049 ORTHO05D008896 1.5e-22 109.4 76 72.4
COL.COLO4_06913 Corchorus olitorius HOM05D007049 ORTHO05D008896 1.9e-22 109.0 84 64.3
Peaxi162Scf00078g00061 Petunia axillaris HOM05D007049 ORTHO05D008896 1.9e-22 109.0 76 71.1
QL04p010524 Quercus lobata HOM05D007049 ORTHO05D008896 1.9e-22 109.0 86 65.1
Ca_24471_v3 Cicer arietinum L. HOM05D007049 ORTHO05D008896 2.5e-22 108.6 77 68.8
Nitab4.5_0000398g0030 Nicotiana tabacum HOM05D007049 ORTHO05D008896 2.5e-22 108.6 76 71.1
Glyma.11G013800 Glycine max HOM05D007049 ORTHO05D008896 3.2e-22 108.2 78 69.2
LjContig00222g0016429 Lotus japonicus HOM05D007049 ORTHO05D008896 4.2e-22 107.8 78 67.9
TWI12G1157 Tripterygium wilfordii HOM05D007049 ORTHO05D008896 4.2e-22 107.8 76 71.1
TAR624G0348 Trochodendron aralioides HOM05D007049 ORTHO05D008896 4.2e-22 107.8 77 71.4
TAR624G1340 Trochodendron aralioides HOM05D007049 ORTHO05D008896 4.2e-22 107.8 77 71.4
Duzib177G1207 Durio zibethinus HOM05D007049 ORTHO05D008896 5.5e-22 107.5 77 67.5
Oeu023195.1 Olea europaea HOM05D007049 ORTHO05D008896 5.5e-22 107.5 76 71.1
PGR042G0623 Punica granatum HOM05D007049 ORTHO05D008896 5.5e-22 107.5 76 69.7
Lalb_Chr03g0041921 Lupinus albus HOM05D007049 ORTHO05D008896 7.2e-22 107.1 77 68.8
RcHm_v2.0_Chr7g0212551 Rosa chinensis HOM05D007049 ORTHO05D008896 7.2e-22 107.1 76 68.4
VMungo1215G2220 Vigna mungo HOM05D007049 ORTHO05D008896 7.2e-22 107.1 71 74.6
Aa31LG5G19930 Aethionema arabicum HOM05D007049 ORTHO05D008896 1.2e-21 106.3 78 67.9
Cc10_g08690 Coffea canephora HOM05D007049 ORTHO05D008896 1.2e-21 106.3 86 64.0
Eucgr.F02581 Eucalyptus grandis HOM05D007049 ORTHO05D008896 1.2e-21 106.3 85 61.2
Prupe.8G009200 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-21 106.3 76 68.4
Thecc.08G177900 Theobroma cacao HOM05D007049 ORTHO05D008896 1.2e-21 106.3 77 68.8
CiPaw.15G066500 Carya illinoinensis HOM05D007049 ORTHO05D008896 1.6e-21 105.9 76 67.1
RcHm_v2.0_Chr7g0212501 Rosa chinensis HOM05D007049 ORTHO05D008896 1.6e-21 105.9 76 68.4
SalBow7G2968 Salvia bowleyana HOM05D007049 ORTHO05D008896 1.6e-21 105.9 76 67.1
TPR.G37942 Trifolium pratense HOM05D007049 ORTHO05D008896 1.6e-21 105.9 78 66.7
Gohir.D13G119000 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.1e-21 105.5 77 64.9
Gorai.013G133400 Gossypium raimondii HOM05D007049 ORTHO05D008896 2.1e-21 105.5 77 64.9
Os08g0278600 Oryza sativa ssp. japonica HOM05D007049 ORTHO05D008896 2.1e-21 105.5 78 65.4
RcHm_v2.0_Chr7g0212661 Rosa chinensis HOM05D007049 ORTHO05D008896 2.1e-21 105.5 76 67.1
Gohir.A13G115800 Gossypium hirsutum HOM05D007049 ORTHO05D008896 2.7e-21 105.1 77 64.9
CSS0000179 Camellia sinensis var. sinensis HOM05D007049 ORTHO05D008896 3.6e-21 104.8 77 66.2
Phvul.002G036400 Phaseolus vulgaris HOM05D007049 ORTHO05D008896 3.6e-21 104.8 78 66.7
Cpa.g.sc19.285 Carica papaya HOM05D007049 ORTHO05D008896 4.7e-21 104.4 76 67.1
Ciclev10023082m.g Citrus clementina HOM05D007049 ORTHO05D008896 4.7e-21 104.4 82 64.6
Migut.C01376 Erythranthe guttata HOM05D007049 ORTHO05D008896 4.7e-21 104.4 76 68.4
Nn5g27287 Nelumbo nucifera HOM05D007049 ORTHO05D008896 4.7e-21 104.4 77 66.2
Rhsim08G0116100 Rhododendron simsii HOM05D007049 ORTHO05D008896 4.7e-21 104.4 76 71.1
EL10Ac7g16149 Beta vulgaris HOM05D007049 ORTHO05D008896 6.1e-21 104.0 76 68.4
ECA248G1776 Erigeron canadensis HOM05D007049 ORTHO05D008896 6.1e-21 104.0 76 67.1
Sabra01G0012500 Salix brachista HOM05D007049 ORTHO05D008896 6.1e-21 104.0 89 61.8
arahy.Tifrunner.gnm1.ann1.6H88WF Arachis hypogaea HOM05D007049 ORTHO05D008896 8.0e-21 103.6 78 65.4
ClCG08G001090 Citrullus lanatus HOM05D007049 ORTHO05D008896 8.0e-21 103.6 78 66.7
Hma1.2p1_0400F.1_g144580 Hydrangea macrophylla HOM05D007049 ORTHO05D008896 8.0e-21 103.6 76 68.4
Prupe.8G008400 Prunus persica HOM05D007049 ORTHO05D008896 8.0e-21 103.6 76 67.1
Psat2g187280 Pisum sativum HOM05D007049 ORTHO05D008896 1.0e-20 103.2 77 67.5
Psat7g180160 Pisum sativum HOM05D007049 ORTHO05D008896 1.0e-20 103.2 77 67.5
Carub.0004s2178 Capsella rubella HOM05D007049 ORTHO05D008896 1.4e-20 102.8 76 68.4
HanXRQChr10g0289041 Helianthus annuus HOM05D007049 ORTHO05D008896 1.4e-20 102.8 77 64.9
Sc20g0003280 Simmondsia chinensis HOM05D007049 ORTHO05D008896 1.4e-20 102.8 74 67.6
CARHR134570 Cardamine hirsuta HOM05D007049 ORTHO05D008896 2.3e-20 102.1 76 67.1
Cfa019294 Carpinus fangiana HOM05D007049 ORTHO05D008896 2.3e-20 102.1 76 68.4
AUR62022356 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.3e-20 102.1 77 64.9
AUR62034352 Chenopodium quinoa HOM05D007049 ORTHO05D008896 2.3e-20 102.1 77 64.9
THA.LOC104824284 Tarenaya hassleriana HOM05D007049 ORTHO05D008896 2.3e-20 102.1 86 62.8
unitig_46.g17984 Utricularia gibba HOM05D007049 ORTHO05D008896 2.3e-20 102.1 80 67.5
Ah.05g168610 Amaranthus hybridus HOM05D007049 ORTHO05D008896 3.0e-20 101.7 77 64.9
HanXRQChr04g0114811 Helianthus annuus HOM05D007049 ORTHO05D008896 3.0e-20 101.7 77 64.9
BcaC02g07431 Brassica carinata HOM05D007049 ORTHO05D008896 4.0e-20 101.3 76 67.1
C04p67530 Brassica napus HOM05D007049 ORTHO05D008896 4.0e-20 101.3 76 67.1
Thhalv10017481m.g Eutrema salsugineum HOM05D007049 ORTHO05D008896 4.0e-20 101.3 76 67.1
Medtr5g008340 Medicago truncatula HOM05D007049 ORTHO05D008896 4.0e-20 101.3 78 66.7
RcHm_v2.0_Chr6g0251481 Rosa chinensis HOM05D007049 ORTHO05D008896 8.8e-20 100.1 82 62.2
AL4G37190 Arabidopsis lyrata HOM05D007049 ORTHO05D008896 1.2e-19 99.8 76 65.8
Psat7g180120 Pisum sativum HOM05D007049 ORTHO05D008896 1.2e-19 99.8 77 64.9
Prupe.8G008800 Prunus persica HOM05D007049 ORTHO05D008896 1.2e-19 99.8 68 72.1
BcaB06g29104 Brassica carinata HOM05D007049 ORTHO05D008896 2.0e-19 99.0 77 67.5
BolC4t28250H Brassica oleracea HOM05D007049 ORTHO05D008896 2.0e-19 99.0 77 67.5
A04p30310 Brassica napus HOM05D007049 ORTHO05D008896 2.6e-19 98.6 77 66.2
Psat7g180080 Pisum sativum HOM05D007049 ORTHO05D008896 2.6e-19 98.6 77 66.2
Zm00001eb026180 Zea mays HOM05D007049 ORTHO05D008896 2.6e-19 98.6 78 62.8
Sed0002937 Sechium edule HOM05D007049 ORTHO05D008896 3.4e-19 98.2 86 59.3
AT2G39725 Arabidopsis thaliana HOM05D007049 ORTHO05D008896 4.4e-19 97.8 76 64.5
BraA04t18476Z Brassica rapa HOM05D007049 ORTHO05D008896 4.4e-19 97.8 77 66.2
Sp4g21990 Schrenkiella parvula HOM05D007049 ORTHO05D008896 4.4e-19 97.8 84 60.7
arahy.Tifrunner.gnm1.ann1.CT79FY Arachis hypogaea HOM05D007049 ORTHO05D008896 7.5e-19 97.1 72 66.7
DCAR_017595 Daucus carota HOM05D007049 ORTHO05D008896 1.3e-18 96.3 76 64.5
FAN04G0010 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.3e-18 96.3 67 70.1
HPP92_017350 Vanilla planifolia HOM05D007049 ORTHO05D008896 1.3e-18 96.3 79 60.8
DCAR_006853 Daucus carota HOM05D007049 ORTHO05D008896 2.2e-18 95.5 76 64.5
Sabra01G0012700 Salix brachista HOM05D007049 ORTHO05D008896 2.2e-18 95.5 85 60.0
Psat7g195680 Pisum sativum HOM05D007049 ORTHO05D008896 4.8e-18 94.4 77 62.3
SGA_v2.0_scaffold118G32610 Striga asiatica HOM05D007049 ORTHO05D008896 1.8e-17 92.4 65 70.8
Potri.001G018100 Populus trichocarpa HOM05D007049 ORTHO05D008896 2.0e-16 89.0 60 73.3
FAN13G1882 Fragaria x ananassa HOM05D007049 ORTHO05D008896 1.0e-15 86.7 63 66.7
ATR0057G071 Amborella trichopoda HOM05D007049 ORTHO05D008896 1.3e-15 86.3 82 54.9
SMO353G0203 Selaginella moellendorffii HOM05D007049 ORTHO05D008896 1.5e-14 82.8 70 58.6
SHI21473 Sapria himalayana HOM05D000105 ORTHO05D000023 1.9e-14 82.4 63 58.7
Manes.01G011600 Manihot esculenta HOM05D007049 ORTHO05D008896 3.3e-14 81.6 60 66.7
MD05G1008200 Malus domestica HOM05D007049 ORTHO05D008896 4.7e-13 77.8 59 64.4
Mapoly0004s0187 Marchantia polymorpha HOM05D007049 ORTHO05D008896 4.0e-12 74.7 76 51.3
Pp3c4_6780 Physcomitrium patens HOM05D007049 ORTHO05D008896 6.8e-12 73.9 72 56.9
Prupe.8G009100 Prunus persica HOM05D007049 ORTHO05D008896 5.7e-11 70.9 75 52.0
Lsat_1_v5_gn_1_45401 Lactuca sativa HOM05D007049 ORTHO05D008896 9.5e-06 53.5 36 66.7


User provided reference genes

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