Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02538 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 1.0e-31 139.4 71 100.0
Aqoxy3G02536 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 2.5e-25 118.2 71 85.9
Aqoxy7G01889 Aquilegia oxysepala HOM05D005609 ORTHO05D006871 5.2e-23 110.5 71 81.7
Actinidia05794 Actinidia chinensis HOM05D005609 ORTHO05D006871 1.7e-13 79.0 70 55.7
TAR375G0879 Trochodendron aralioides HOM05D005609 ORTHO05D006871 1.7e-13 79.0 69 58.0
EL10Ac1g00709 Beta vulgaris HOM05D005609 ORTHO05D006871 4.9e-13 77.4 70 55.7
Dinv44009 Davidia involucrata HOM05D005609 ORTHO05D006871 1.1e-12 76.3 70 54.3
Potri.002G134900 Populus trichocarpa HOM05D005609 ORTHO05D006871 1.4e-12 75.9 70 48.6
AUR62013794 Chenopodium quinoa HOM05D005609 ORTHO05D006871 4.1e-12 74.3 69 55.1
AUR62023361 Chenopodium quinoa HOM05D005609 ORTHO05D006871 5.4e-12 73.9 69 55.1
Oeu021960.2 Olea europaea HOM05D005609 ORTHO05D006871 7.1e-12 73.6 70 50.0
Migut.K00777 Erythranthe guttata HOM05D005609 ORTHO05D006871 9.2e-12 73.2 65 52.3
QL04p025874 Quercus lobata HOM05D005609 ORTHO05D006871 9.2e-12 73.2 70 52.9
Nn1g00634 Nelumbo nucifera HOM05D005609 ORTHO05D006871 1.6e-11 72.4 71 50.7
Ciclev10020203m.g Citrus clementina HOM05D005609 ORTHO05D006871 2.1e-11 72.0 65 53.8
Atru.chr5.35 Acer truncatum HOM05D005609 ORTHO05D006871 4.6e-11 70.9 70 50.0
Sed0001863 Sechium edule HOM05D005609 ORTHO05D006871 6.0e-11 70.5 71 47.9
Atru.chr5.65 Acer truncatum HOM05D005609 ORTHO05D006871 7.8e-11 70.1 70 50.0
unitig_26.g8865 Utricularia gibba HOM05D005609 ORTHO05D006871 1.0e-10 69.7 62 51.6
GSVIVG01022468001 Vitis vinifera HOM05D005609 ORTHO05D006871 1.0e-10 69.7 70 47.1
Hma1.2p1_0973F.1_g243010 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 1.3e-10 69.3 70 51.4
PSO017G2814 Papaver somniferum HOM05D005609 ORTHO05D006871 1.3e-10 69.3 72 51.4
PSO063G0967 Papaver somniferum HOM05D005609 ORTHO05D006871 1.7e-10 68.9 71 52.1
CSS0026157 Camellia sinensis var. sinensis HOM05D005609 ORTHO05D006871 2.3e-10 68.6 64 54.7
CsaV3_3G010350 Cucumis sativus L. HOM05D005609 ORTHO05D006871 2.3e-10 68.6 71 45.1
Gohir.D09G165100 Gossypium hirsutum HOM05D005609 ORTHO05D006871 2.3e-10 68.6 66 47.0
Duzib268G1371 Durio zibethinus HOM05D005609 ORTHO05D006871 3.0e-10 68.2 66 45.5
ClCG05G002820 Citrullus lanatus HOM05D005609 ORTHO05D006871 6.6e-10 67.0 71 45.1
TWI23G1015 Tripterygium wilfordii HOM05D005609 ORTHO05D006871 6.6e-10 67.0 64 53.1
MELO3C006259.2 Cucumis melo HOM05D005609 ORTHO05D006871 8.6e-10 66.6 69 44.9
PGR142G0047 Punica granatum HOM05D005609 ORTHO05D006871 8.6e-10 66.6 63 47.6
RcHm_v2.0_Chr1g0343911 Rosa chinensis HOM05D005609 ORTHO05D006871 8.6e-10 66.6 70 45.7
ECA234G4049 Erigeron canadensis HOM05D005609 ORTHO05D006871 1.1e-09 66.2 61 47.5
HanXRQChr02g0046691 Helianthus annuus HOM05D005609 ORTHO05D006871 1.1e-09 66.2 64 48.4
Lsat_1_v5_gn_4_38680 Lactuca sativa HOM05D005609 ORTHO05D006871 1.1e-09 66.2 61 47.5
Eucgr.E03531 Eucalyptus grandis HOM05D005609 ORTHO05D006871 1.5e-09 65.9 65 47.7
Hund17127 Selenicereus undatus HOM05D005609 ORTHO05D006871 1.5e-09 65.9 69 47.8
MD07G1087900 Malus domestica HOM05D005609 ORTHO05D006871 1.9e-09 65.5 62 53.2
HPP92_008983 Vanilla planifolia HOM05D005609 ORTHO05D006871 1.9e-09 65.5 71 43.7
BolC6t40388H Brassica oleracea HOM05D005609 ORTHO05D006871 3.3e-09 64.7 60 55.0
Ah.16g103320 Amaranthus hybridus HOM05D005609 ORTHO05D006871 4.3e-09 64.3 69 49.3
MSTRG.20658 Avicennia marina HOM05D005609 ORTHO05D006871 4.3e-09 64.3 64 50.0
CANSAT25G0413 Cannabis sativa HOM05D005609 ORTHO05D006871 4.3e-09 64.3 69 43.5
MD02G1225900 Malus domestica HOM05D005609 ORTHO05D006871 4.3e-09 64.3 59 54.2
Cfa022162 Carpinus fangiana HOM05D005609 ORTHO05D006871 5.6e-09 63.9 65 49.2
Manes.05G059500 Manihot esculenta HOM05D005609 ORTHO05D006871 7.3e-09 63.5 61 50.8
Prupe.2G114600 Prunus persica HOM05D005609 ORTHO05D006871 7.3e-09 63.5 62 51.6
Solyc09g090460.3 Solanum lycopersicum HOM05D005609 ORTHO05D006871 7.3e-09 63.5 69 46.4
Sopen09g033380 Solanum pennellii HOM05D005609 ORTHO05D006871 7.3e-09 63.5 69 46.4
DCAR_029526 Daucus carota HOM05D005609 ORTHO05D006871 9.5e-09 63.2 61 52.5
CAN.G221.2 Capsicum annuum HOM05D005609 ORTHO05D006871 1.6e-08 62.4 69 44.9
A07p44900 Brassica napus HOM05D005609 ORTHO05D006871 2.1e-08 62.0 60 53.3
BraA07t31997Z Brassica rapa HOM05D005609 ORTHO05D006871 2.1e-08 62.0 60 53.3
Zm00001eb415700 Zea mays HOM05D005609 ORTHO05D006871 2.8e-08 61.6 58 51.7
Peaxi162Scf00103g01924 Petunia axillaris HOM05D005609 ORTHO05D006871 3.6e-08 61.2 69 46.4
THA.LOC104804469 Tarenaya hassleriana HOM05D005609 ORTHO05D006871 3.6e-08 61.2 67 49.3
BcaC08g47546 Brassica carinata HOM05D005609 ORTHO05D006871 6.2e-08 60.5 60 51.7
CDE11G0052 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 8.1e-08 60.1 64 50.0
Ca_20451_v3 Cicer arietinum L. HOM05D005609 ORTHO05D006871 8.1e-08 60.1 71 46.5
Gorai.006G186900 Gossypium raimondii HOM05D005609 ORTHO05D006871 8.1e-08 60.1 57 49.1
Nitab4.5_0000204g0040 Nicotiana tabacum HOM05D005609 ORTHO05D006871 8.1e-08 60.1 69 43.5
Nitab4.5_0011341g0010 Nicotiana tabacum HOM05D005609 ORTHO05D006871 8.1e-08 60.1 69 43.5
PGSC0003DMG402017205 Solanum tuberosum HOM05D005609 ORTHO05D006871 8.1e-08 60.1 69 44.9
SGA_v2.0_scaffold45G17248 Striga asiatica HOM05D005609 ORTHO05D006871 8.1e-08 60.1 66 48.5
Aa31LG4G1030 Aethionema arabicum HOM05D005609 ORTHO05D006871 1.1e-07 59.7 70 42.9
Hma1.2p1_1440F.1_g283520 Hydrangea macrophylla HOM05D005609 ORTHO05D006871 1.1e-07 59.7 84 42.9
Medtr7g450930 Medicago truncatula HOM05D005609 ORTHO05D006871 1.1e-07 59.7 71 46.5
ATR0665G596 Amborella trichopoda HOM05D005609 ORTHO05D006871 1.4e-07 59.3 51 51.0
Thecc.02G366200 Theobroma cacao HOM05D005609 ORTHO05D006871 1.4e-07 59.3 70 42.9
CDE02G3958 Ceratophyllum demersum HOM05D005609 ORTHO05D006871 1.8e-07 58.9 51 51.0
TPR.G39143 Trifolium pratense HOM05D005609 ORTHO05D006871 2.4e-07 58.5 71 45.1
AL2G40620 Arabidopsis lyrata HOM05D005609 ORTHO05D006871 4.0e-07 57.8 63 46.0
BcaB02g07248 Brassica carinata HOM05D000537 ORTHO05D006871 5.2e-07 57.4 59 50.8
CiPaw.14G015500 Carya illinoinensis HOM05D005609 ORTHO05D006871 5.2e-07 57.4 84 42.9
Sc26g0001790 Simmondsia chinensis HOM05D005609 ORTHO05D006871 6.8e-07 57.0 58 44.8
AT1G80770 Arabidopsis thaliana HOM05D005609 ORTHO05D006871 8.9e-07 56.6 70 41.4
Psat3g155960 Pisum sativum HOM05D005609 ORTHO05D006871 8.9e-07 56.6 64 45.3
arahy.Tifrunner.gnm1.ann1.R04L27 Arachis hypogaea HOM05D005609 ORTHO05D006871 1.2e-06 56.2 68 42.6
CARHR073710 Cardamine hirsuta HOM05D005609 ORTHO05D006871 1.2e-06 56.2 63 46.0
Thhalv10018566m.g Eutrema salsugineum HOM05D005609 ORTHO05D006871 1.5e-06 55.8 63 44.4
Glyma.08G340000 Glycine max HOM05D005609 ORTHO05D006871 1.5e-06 55.8 71 43.7
Carub.0002s0078 Capsella rubella HOM05D005609 ORTHO05D006871 2.6e-06 55.1 62 46.8
FAN10G3233 Fragaria x ananassa HOM05D005609 ORTHO05D006871 2.6e-06 55.1 62 43.5
Lj9A548T58 Lonicera japonica HOM05D005609 ORTHO05D006871 2.6e-06 55.1 46 58.7
Phvul.008G139400 Phaseolus vulgaris HOM05D005609 ORTHO05D006871 3.4e-06 54.7 61 45.9
FvH4_7g08680 Fragaria vesca HOM05D005609 ORTHO05D006871 4.4e-06 54.3 62 43.5
FAN06G0131 Fragaria x ananassa HOM05D005609 ORTHO05D006871 4.4e-06 54.3 62 43.5
Sp5g34990 Schrenkiella parvula HOM05D005609 ORTHO05D006871 4.4e-06 54.3 63 44.4
A07p26850 Brassica napus HOM05D000537 ORTHO05D006871 5.8e-06 53.9 59 47.5
C06p29500 Brassica napus HOM05D000537 ORTHO05D006871 5.8e-06 53.9 59 45.8
BraA07t30328Z Brassica rapa HOM05D005609 ORTHO05D006871 5.8e-06 53.9 59 47.5
Cpa.g.sc24.96 Carica papaya HOM05D005609 ORTHO05D043520 5.8e-06 53.9 52 50.0
Lj1g0022406 Lotus japonicus HOM05D005609 ORTHO05D006871 5.8e-06 53.9 71 43.7
Rhsim07G0039900 Rhododendron simsii HOM05D005609 ORTHO05D006871 5.8e-06 53.9 46 56.5
arahy.Tifrunner.gnm1.ann1.HH0QF2 Arachis hypogaea HOM05D005609 ORTHO05D006871 7.6e-06 53.5 68 39.7
FAN10G3950 Fragaria x ananassa HOM05D005609 ORTHO05D006871 7.6e-06 53.5 62 41.9


User provided reference genes

Program Settings