Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02533 Aquilegia oxysepala HOM05D006780 ORTHO05D008455 9.8e-138 493.4 244 100.0
Nn6g33682 Nelumbo nucifera HOM05D006780 ORTHO05D008455 1.6e-95 353.2 247 68.4
TAR629G2389 Trochodendron aralioides HOM05D006780 ORTHO05D008455 1.9e-93 346.3 248 68.1
Lj3A891T47 Lonicera japonica HOM05D006780 ORTHO05D008455 1.5e-90 336.7 253 65.2
TAR636G2448 Trochodendron aralioides HOM05D006780 ORTHO05D008455 2.0e-90 336.3 249 67.5
Cfa013613 Carpinus fangiana HOM05D006780 ORTHO05D008455 7.6e-90 334.3 248 65.7
Solyc07g005550.4 Solanum lycopersicum HOM05D006780 ORTHO05D008455 1.0e-89 334.0 250 64.8
Sopen07g001650 Solanum pennellii HOM05D006780 ORTHO05D008455 2.2e-89 332.8 250 64.4
Nitab4.5_0000011g0110 Nicotiana tabacum HOM05D006780 ORTHO05D008455 3.8e-89 332.0 250 64.8
Nitab4.5_0007683g0020 Nicotiana tabacum HOM05D006780 ORTHO05D008455 4.9e-89 331.6 250 64.4
SalBow2G3389 Salvia bowleyana HOM05D006780 ORTHO05D008455 8.4e-89 330.9 250 66.0
CAN.G160.70 Capsicum annuum HOM05D006780 ORTHO05D008455 4.2e-88 328.6 253 63.6
Ciclev10012613m.g Citrus clementina HOM05D006780 ORTHO05D008455 5.5e-88 328.2 248 64.1
Dinv29183 Davidia involucrata HOM05D006780 ORTHO05D008455 1.2e-87 327.0 248 66.5
HanXRQChr08g0225871 Helianthus annuus HOM05D006780 ORTHO05D008455 1.6e-87 326.6 253 64.4
MSTRG.17 Avicennia marina HOM05D006780 ORTHO05D008455 2.7e-87 325.9 248 64.5
QL09p026712 Quercus lobata HOM05D006780 ORTHO05D008455 7.9e-87 324.3 254 63.8
Hund14300 Selenicereus undatus HOM05D006780 ORTHO05D008455 1.3e-86 323.6 262 60.3
Lsat_1_v5_gn_8_3841 Lactuca sativa HOM05D006780 ORTHO05D008455 3.9e-86 322.0 253 62.8
Atru.chr12.2100 Acer truncatum HOM05D006780 ORTHO05D008455 5.1e-86 321.6 248 64.1
RcHm_v2.0_Chr1g0383391 Rosa chinensis HOM05D006780 ORTHO05D008455 1.1e-85 320.5 225 68.0
COL.COLO4_34143 Corchorus olitorius HOM05D006780 ORTHO05D008455 1.5e-85 320.1 252 64.3
SGA_v2.0_scaffold165G38216 Striga asiatica HOM05D006780 ORTHO05D008455 1.9e-85 319.7 256 63.3
CSS0033689 Camellia sinensis var. sinensis HOM05D006780 ORTHO05D008455 3.3e-85 318.9 250 60.4
FAN03G1919 Fragaria x ananassa HOM05D006780 ORTHO05D008455 1.6e-84 316.6 227 68.3
FAN10G0287 Fragaria x ananassa HOM05D006780 ORTHO05D008455 6.3e-84 314.7 227 68.3
Migut.F00963 Erythranthe guttata HOM05D006780 ORTHO05D008455 1.1e-83 313.9 250 62.4
Hma1.2p1_0115F.1_g055870 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 1.1e-83 313.9 213 70.9
Thecc.05G208000 Theobroma cacao HOM05D006780 ORTHO05D008455 1.4e-83 313.5 251 62.9
Cc02_g00520 Coffea canephora HOM05D006780 ORTHO05D008455 1.8e-83 313.2 251 62.2
Gohir.A05G389500 Gossypium hirsutum HOM05D006780 ORTHO05D008455 2.4e-83 312.8 251 62.5
Gorai.012G029700 Gossypium raimondii HOM05D006780 ORTHO05D008455 2.4e-83 312.8 251 62.5
FvH4_7g33420 Fragaria vesca HOM05D006780 ORTHO05D008455 3.1e-83 312.4 227 67.8
FAN01G1241 Fragaria x ananassa HOM05D006780 ORTHO05D008455 3.1e-83 312.4 227 67.8
FAN10G2247 Fragaria x ananassa HOM05D006780 ORTHO05D008455 4.1e-83 312.0 227 67.8
GSVIVG01024468001 Vitis vinifera HOM05D006780 ORTHO05D008455 6.9e-83 311.2 215 67.4
Gohir.D04G027000 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.5e-82 310.1 251 61.8
Eucgr.K00108 Eucalyptus grandis HOM05D006780 ORTHO05D008455 2.0e-82 309.7 251 59.4
PGR142G1227 Punica granatum HOM05D006780 ORTHO05D008455 2.6e-82 309.3 256 59.8
Actinidia08727 Actinidia chinensis HOM05D006780 ORTHO05D008455 5.9e-82 308.1 249 62.7
CiPaw.08G043400 Carya illinoinensis HOM05D006780 ORTHO05D008455 7.6e-82 307.8 255 60.8
Actinidia34294 Actinidia chinensis HOM05D006780 ORTHO05D008455 1.0e-81 307.4 255 58.8
Sc07g0007970 Simmondsia chinensis HOM05D006780 ORTHO05D008455 3.8e-81 305.4 223 64.6
PGSC0003DMG400011181 Solanum tuberosum HOM05D006780 ORTHO05D008455 8.5e-81 304.3 327 49.8
vmacro06481 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 4.2e-80 302.0 272 56.6
CANSAT21G1469 Cannabis sativa HOM05D006780 ORTHO05D008455 9.4e-80 300.8 269 56.1
Ah.12g058490 Amaranthus hybridus HOM05D006780 ORTHO05D008455 1.2e-79 300.4 218 67.4
Peaxi162Scf00542g00012 Petunia axillaris HOM05D006780 ORTHO05D008455 1.2e-79 300.4 255 58.8
AUR62030415 Chenopodium quinoa HOM05D006780 ORTHO05D008455 1.6e-79 300.1 221 65.6
Gorai.004G260300 Gossypium raimondii HOM05D006780 ORTHO05D008455 2.7e-79 299.3 251 61.0
Hma1.2p1_0115F.1_g055860 Hydrangea macrophylla HOM05D006780 ORTHO05D008455 2.7e-79 299.3 251 61.8
AUR62010478 Chenopodium quinoa HOM05D006780 ORTHO05D008455 6.1e-79 298.1 221 65.2
Gohir.1Z049572 Gossypium hirsutum HOM05D006780 ORTHO05D008455 1.0e-78 297.4 251 60.6
CDE02G2736 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 2.5e-77 292.7 251 59.0
PSO063G3320 Papaver somniferum HOM05D006780 ORTHO05D008455 1.7e-76 290.0 281 55.9
TWI60G0503 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 1.7e-76 290.0 248 58.9
arahy.Tifrunner.gnm1.ann1.T2A0GP Arachis hypogaea HOM05D006780 ORTHO05D008455 2.2e-76 289.7 246 55.7
arahy.Tifrunner.gnm1.ann1.T66758 Arachis hypogaea HOM05D006780 ORTHO05D008455 3.7e-76 288.9 246 55.7
THA.LOC104805709 Tarenaya hassleriana HOM05D006780 ORTHO05D008455 3.7e-76 288.9 231 63.2
Gohir.A08G223700 Gossypium hirsutum HOM05D006780 ORTHO05D008455 8.2e-76 287.7 238 61.3
Manes.09G119100 Manihot esculenta HOM05D006780 ORTHO05D008455 1.1e-75 287.3 251 59.4
Prupe.2G322900 Prunus persica HOM05D006780 ORTHO05D008455 1.1e-75 287.3 244 59.4
vmacro10178 Vaccinium macrocarpon HOM05D006780 ORTHO05D008455 1.1e-75 287.3 292 51.0
PSO782G3414 Papaver somniferum HOM05D006780 ORTHO05D008455 1.8e-75 286.6 285 55.1
Rhsim03G0219000 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.8e-75 286.6 280 52.9
TWI34G0276 Tripterygium wilfordii HOM05D006780 ORTHO05D008455 5.3e-75 285.0 250 58.8
CiPaw.07G182200 Carya illinoinensis HOM05D006780 ORTHO05D008455 2.6e-74 282.7 199 67.3
unitig_52.g16857 Utricularia gibba HOM05D006780 ORTHO05D008455 2.6e-74 282.7 216 61.1
ECA233G5194 Erigeron canadensis HOM05D006780 ORTHO05D008455 3.4e-74 282.3 201 68.2
MD07G1304300 Malus domestica HOM05D006780 ORTHO05D008455 5.9e-74 281.6 214 66.8
Aa31LG2G2290 Aethionema arabicum HOM05D006780 ORTHO05D008455 1.0e-73 280.8 231 61.5
CDE11G0765 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.1e-72 277.3 249 55.0
Potri.004G030100 Populus trichocarpa HOM05D006780 ORTHO05D008455 1.1e-72 277.3 269 55.4
Thhalv10022468m.g Eutrema salsugineum HOM05D006780 ORTHO05D008455 1.9e-72 276.6 256 56.6
MD01G1232400 Malus domestica HOM05D006780 ORTHO05D008455 1.9e-72 276.6 215 64.7
DCAR_008997 Daucus carota HOM05D006780 ORTHO05D008455 3.2e-72 275.8 249 54.6
Sabra04G0017100 Salix brachista HOM05D006780 ORTHO05D008455 7.2e-72 274.6 269 53.5
Sed0025589 Sechium edule HOM05D006780 ORTHO05D008455 4.7e-71 271.9 223 59.6
Rhsim09G0211500 Rhododendron simsii HOM05D006780 ORTHO05D008455 1.4e-70 270.4 300 48.0
ClCG01G004850 Citrullus lanatus HOM05D006780 ORTHO05D008455 3.0e-70 269.2 245 55.5
AT2G44870 Arabidopsis thaliana HOM05D006780 ORTHO05D008455 3.9e-70 268.9 228 59.6
Sp5g19750 Schrenkiella parvula HOM05D006780 ORTHO05D008455 3.3e-69 265.8 251 55.0
VMungo1127G1066 Vigna mungo HOM05D006780 ORTHO05D008455 5.7e-69 265.0 196 62.2
EL10Ac5g12581 Beta vulgaris HOM05D006780 ORTHO05D008455 2.8e-68 262.7 277 49.8
MELO3C005448.2 Cucumis melo HOM05D006780 ORTHO05D008455 4.8e-68 261.9 244 53.7
Lj3g0022672 Lotus japonicus HOM05D006780 ORTHO05D008455 1.1e-67 260.8 202 60.9
AL2G19830 Arabidopsis lyrata HOM05D006780 ORTHO05D008455 1.4e-67 260.4 221 58.4
CDE02G3388 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 1.4e-67 260.4 245 51.4
Phvul.011G002600 Phaseolus vulgaris HOM05D006780 ORTHO05D008455 1.8e-67 260.0 213 58.7
BraA02t06361Z Brassica rapa HOM05D006780 ORTHO05D008455 7.0e-67 258.1 224 56.2
BcaC03g14678 Brassica carinata HOM05D006780 ORTHO05D008455 9.1e-67 257.7 224 56.2
A02p13050 Brassica napus HOM05D006780 ORTHO05D008455 9.1e-67 257.7 224 56.2
BolC2t08258H Brassica oleracea HOM05D006780 ORTHO05D008455 9.1e-67 257.7 224 56.2
Medtr4g033475 Medicago truncatula HOM05D006780 ORTHO05D008455 2.6e-66 256.1 194 62.4
CsaV3_5G005070 Cucumis sativus L. HOM05D006780 ORTHO05D008455 3.4e-66 255.8 244 51.6
BcaB05g24083 Brassica carinata HOM05D006780 ORTHO05D008455 7.7e-66 254.6 242 54.1
C02p21190 Brassica napus HOM05D006780 ORTHO05D008455 7.7e-66 254.6 247 53.4
Glyma.12G002200 Glycine max HOM05D006780 ORTHO05D008455 1.3e-65 253.8 189 61.9
Carub.0002s1056 Capsella rubella HOM05D006780 ORTHO05D008455 3.8e-65 252.3 252 54.0
Glyma.09G234600 Glycine max HOM05D006780 ORTHO05D008455 8.5e-65 251.1 192 59.9
Dinv17273 Davidia involucrata HOM05D006780 ORTHO05D008455 1.4e-64 250.4 165 69.7
Psat7g145160 Pisum sativum HOM05D006780 ORTHO05D008455 7.2e-64 248.1 248 51.2
Ca_19681_v3 Cicer arietinum L. HOM05D006780 ORTHO05D008455 2.1e-63 246.5 248 50.8
TPR.G31925 Trifolium pratense HOM05D006780 ORTHO05D008455 4.7e-63 245.4 194 60.3
CDE11G0053 Ceratophyllum demersum HOM05D006780 ORTHO05D008455 4.4e-61 238.8 245 50.2
Zm00001eb024190 Zea mays HOM05D006780 ORTHO05D008455 1.3e-60 237.3 245 48.6
Duzib128G1164 Durio zibethinus HOM05D006780 ORTHO05D008455 4.1e-59 232.3 251 51.4
CARHR056600 Cardamine hirsuta HOM05D006780 ORTHO05D008455 7.0e-59 231.5 225 53.3
HPP92_025668 Vanilla planifolia HOM05D006780 ORTHO05D008455 7.2e-56 221.5 250 48.0
ATR0829G223 Amborella trichopoda HOM05D006780 ORTHO05D008455 3.6e-55 219.2 190 55.8
Duzib177G1050 Durio zibethinus HOM05D006780 ORTHO05D008455 4.7e-55 218.8 251 48.6
Cpa.g.sc39.45 Carica papaya HOM05D006780 ORTHO05D008455 3.4e-37 159.5 149 52.3
SMO301G0031 Selaginella moellendorffii HOM05D006780 ORTHO05D008455 5.9e-34 148.7 181 39.2
Pp3c8_4270 Physcomitrium patens HOM05D006780 ORTHO05D008455 2.5e-32 143.3 205 36.6
CSS0031860 Camellia sinensis var. sinensis HOM05D001955 ORTHO05D001917 7.0e-27 125.2 118 53.4
Mapoly0133s0055 Marchantia polymorpha HOM05D006780 ORTHO05D008455 2.7e-26 123.2 158 37.3
CBR_g642 Chara braunii HOM05D006780 ORTHO05D008455 5.2e-22 109.0 190 34.2
Os10g0569000 Oryza sativa ssp. japonica HOM05D006780 ORTHO05D008455 3.1e-14 83.2 88 44.3


User provided reference genes

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