Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02490 Aquilegia oxysepala HOM05D007737 ORTHO05D009754 7.2e-61 237.3 138 100.0
Oeu029042.1 Olea europaea HOM05D007737 ORTHO05D009754 4.9e-17 91.7 93 51.6
PGR119G2515 Punica granatum HOM05D007737 ORTHO05D009754 5.4e-16 88.2 105 53.3
TAR375G1083 Trochodendron aralioides HOM05D007737 ORTHO05D009754 9.2e-16 87.4 92 63.0
arahy.Tifrunner.gnm1.ann1.J0MG2W Arachis hypogaea HOM05D007737 ORTHO05D009754 2.0e-15 86.3 106 48.1
Migut.N01704 Erythranthe guttata HOM05D007737 ORTHO05D009754 3.5e-15 85.5 102 47.1
Manes.12G126400 Manihot esculenta HOM05D007737 ORTHO05D009754 3.5e-15 85.5 93 49.5
TWI14G0846 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 1.3e-14 83.6 92 62.0
DCAR_029388 Daucus carota HOM05D007737 ORTHO05D009754 1.7e-14 83.2 129 47.3
Duzib128G0131 Durio zibethinus HOM05D007737 ORTHO05D009754 1.7e-14 83.2 106 48.1
MSTRG.4970 Avicennia marina HOM05D007737 ORTHO05D009754 3.9e-14 82.0 93 47.3
Psat0s2829g0120 Pisum sativum HOM05D007737 ORTHO05D009754 3.9e-14 82.0 110 50.0
Psat0s4349g0040 Pisum sativum HOM05D007737 ORTHO05D009754 3.9e-14 82.0 110 50.0
Sabra14G0139900 Salix brachista HOM05D007737 ORTHO05D009754 3.9e-14 82.0 100 47.0
Gohir.A05G333700 Gossypium hirsutum HOM05D007737 ORTHO05D009754 5.0e-14 81.6 93 47.3
CANSAT35G0994 Cannabis sativa HOM05D007737 ORTHO05D009754 8.6e-14 80.9 93 58.1
Gohir.D04G072800 Gossypium hirsutum HOM05D007737 ORTHO05D009754 1.5e-13 80.1 92 46.7
Gorai.012G081800 Gossypium raimondii HOM05D007737 ORTHO05D009754 1.5e-13 80.1 92 46.7
TWI23G0770 Tripterygium wilfordii HOM05D007737 ORTHO05D009754 2.5e-13 79.3 103 55.3
RcHm_v2.0_Chr0c20g0500251 Rosa chinensis HOM05D007737 ORTHO05D009754 3.3e-13 79.0 91 47.3
HanXRQChr06g0168511 Helianthus annuus HOM05D007737 ORTHO05D009754 5.6e-13 78.2 93 48.4
arahy.Tifrunner.gnm1.ann1.BW18VB Arachis hypogaea HOM05D007737 ORTHO05D009754 1.6e-12 76.6 106 50.0
arahy.Tifrunner.gnm1.ann1.HH45UC Arachis hypogaea HOM05D007737 ORTHO05D009754 1.6e-12 76.6 106 50.0
Lsat_1_v5_gn_7_11721 Lactuca sativa HOM05D007737 ORTHO05D009754 1.6e-12 76.6 131 38.9
PGSC0003DMG400015652 Solanum tuberosum HOM05D007737 ORTHO05D009754 1.6e-12 76.6 93 44.1
Solyc06g051160.4 Solanum lycopersicum HOM05D007737 ORTHO05D009754 2.1e-12 76.3 126 39.7
Glyma.02G276300 Glycine max HOM05D007737 ORTHO05D009754 3.6e-12 75.5 93 53.8
Hma1.2p1_0601F.1_g187210 Hydrangea macrophylla HOM05D007737 ORTHO05D009754 4.7e-12 75.1 116 41.4
arahy.Tifrunner.gnm1.ann1.4BAK6K Arachis hypogaea HOM05D004879 ORTHO05D009754 8.1e-12 74.3 83 49.4
Actinidia05801 Actinidia chinensis HOM05D007737 ORTHO05D009754 1.8e-11 73.2 98 40.8
Cc02_g25850 Coffea canephora HOM05D007737 ORTHO05D009754 1.8e-11 73.2 92 43.5
Dinv43570 Davidia involucrata HOM05D007737 ORTHO05D009754 4.0e-11 72.0 133 42.1
Potri.014G179800 Populus trichocarpa HOM05D007737 ORTHO05D009754 4.0e-11 72.0 100 59.0
Ciclev10022762m.g Citrus clementina HOM05D007737 ORTHO05D009754 5.2e-11 71.6 94 48.9
COL.COLO4_19346 Corchorus olitorius HOM05D007737 ORTHO05D009754 1.5e-10 70.1 110 41.8
PSO210G3425 Papaver somniferum HOM05D007737 ORTHO05D009754 2.6e-10 69.3 93 57.0
PSO210G3843 Papaver somniferum HOM05D007737 ORTHO05D009754 2.6e-10 69.3 93 57.0
Psat0s4932g0040 Pisum sativum HOM05D007737 ORTHO05D009754 2.6e-10 69.3 110 45.5
Actinidia30967 Actinidia chinensis HOM05D007737 ORTHO05D009754 4.4e-10 68.6 97 39.2
LjContig00564g0006359 Lotus japonicus HOM05D007737 ORTHO05D009754 9.8e-10 67.4 93 50.5
Sed0019089 Sechium edule HOM05D007737 ORTHO05D009754 9.8e-10 67.4 92 50.0
CiPaw.13G019700 Carya illinoinensis HOM05D007737 ORTHO05D009754 2.2e-09 66.2 127 47.2
Phvul.008G205200 Phaseolus vulgaris HOM05D007737 ORTHO05D009754 2.2e-09 66.2 91 50.5
SalBow4G2387 Salvia bowleyana HOM05D007737 ORTHO05D009754 2.9e-09 65.9 94 41.5
Eucgr.D01138 Eucalyptus grandis HOM05D007737 ORTHO05D009754 3.7e-09 65.5 96 47.9
Nitab4.5_0011440g0030 Nicotiana tabacum HOM05D007737 ORTHO05D009754 6.4e-09 64.7 118 37.3
Thecc.10G000900 Theobroma cacao HOM05D007737 ORTHO05D009754 8.3e-09 64.3 103 43.7
GSVIVG01018401001 Vitis vinifera HOM05D007737 ORTHO05D009754 8.3e-09 64.3 127 48.8
ECA236G0282 Erigeron canadensis HOM05D007737 ORTHO05D009754 3.2e-08 62.4 106 44.3
SGA_v2.0_scaffold77G25232 Striga asiatica HOM05D007737 ORTHO05D009754 3.2e-08 62.4 85 42.4
CsaV3_6G006540 Cucumis sativus L. HOM05D007737 ORTHO05D009754 5.4e-08 61.6 92 47.8
Lalb_Chr17g0347681 Lupinus albus HOM05D007737 ORTHO05D009754 5.4e-08 61.6 130 40.0
CSS0024286 Camellia sinensis var. sinensis HOM05D007737 ORTHO05D009754 9.2e-08 60.8 93 46.2
QL04p025132 Quercus lobata HOM05D007737 ORTHO05D009754 1.2e-07 60.5 105 47.6
CAN.G1183.16 Capsicum annuum HOM05D007737 ORTHO05D009754 3.5e-07 58.9 93 45.2
MD02G1228500 Malus domestica HOM05D007737 ORTHO05D009754 3.5e-07 58.9 92 45.7
Sc02g0003320 Simmondsia chinensis HOM05D007737 ORTHO05D009754 3.5e-07 58.9 95 44.2
AL3G30770 Arabidopsis lyrata HOM05D007737 ORTHO05D009754 4.6e-07 58.5 109 45.9
Carub.0003s1738 Capsella rubella HOM05D007737 ORTHO05D009754 4.6e-07 58.5 109 45.9
Aa31LG8G4530 Aethionema arabicum HOM05D007345 ORTHO05D009277 1.0e-06 57.4 85 47.1
FvH4_7g08430 Fragaria vesca HOM05D007737 ORTHO05D009754 1.7e-06 56.6 92 44.6
AT3G17668 Arabidopsis thaliana HOM05D007737 ORTHO05D009754 3.9e-06 55.5 109 46.8
BraA01t03730Z Brassica rapa HOM05D007737 ORTHO05D009754 6.6e-06 54.7 108 44.4
Atru.chr5.19 Acer truncatum HOM05D007737 ORTHO05D009754 8.6e-06 54.3 89 47.2
AagrBONN_evm.TU.Sc2ySwM_344.418 Anthoceros agrestis HOM05D007737 ORTHO05D009754 8.6e-06 54.3 80 48.8


User provided reference genes

Program Settings