Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02485 Aquilegia oxysepala HOM05D000651 ORTHO05D003990 3.7e-76 288.1 145 100.0
Aqoxy3G04208 Aquilegia oxysepala HOM05D032976 ORTHO05D003990 1.4e-27 126.7 97 61.9
Aqoxy3G02513 Aquilegia oxysepala HOM05D032976 ORTHO05D003990 3.3e-16 89.0 100 48.0
SGA_v2.0_scaffold39G15180 Striga asiatica HOM05D000651 ORTHO05D003990 2.5e-11 72.8 132 35.6
vmacro00413 Vaccinium macrocarpon HOM05D008822 ORTHO05D003990 1.8e-09 66.6 90 37.8
Duzib251G0891 Durio zibethinus HOM05D000651 ORTHO05D003990 3.9e-09 65.5 104 38.5
TPR.G38350 Trifolium pratense HOM05D000651 ORTHO05D003990 3.9e-09 65.5 102 32.4
EL10Ac1g00119 Beta vulgaris HOM05D000294 ORTHO05D003990 5.1e-09 65.1 69 44.9
Migut.E00431 Erythranthe guttata HOM05D000651 ORTHO05D003990 8.8e-09 64.3 74 41.9
Rhsim09G0066300 Rhododendron simsii HOM05D000651 ORTHO05D003990 8.8e-09 64.3 90 34.4
Dinv07655 Davidia involucrata HOM05D000651 ORTHO05D003990 1.1e-08 63.9 89 37.1
Duzib248G1110 Durio zibethinus HOM05D000651 ORTHO05D003990 2.0e-08 63.2 124 35.5
CSS0033557 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 2.5e-08 62.8 101 36.6
CSS0042277 Camellia sinensis var. sinensis HOM05D000651 ORTHO05D003990 2.5e-08 62.8 101 36.6
Nn4g24185 Nelumbo nucifera HOM05D008822 ORTHO05D003990 2.5e-08 62.8 72 45.8
Prupe.5G053600 Prunus persica HOM05D015272 ORTHO05D003990 3.3e-08 62.4 111 36.0
HanXRQChr15g0476831 Helianthus annuus HOM05D000651 ORTHO05D003990 4.3e-08 62.0 82 36.6
Lsat_1_v5_gn_3_55361 Lactuca sativa HOM05D000651 ORTHO05D003990 4.3e-08 62.0 91 37.4
TAR629G0208 Trochodendron aralioides HOM05D008822 ORTHO05D003990 4.3e-08 62.0 104 33.7
EL10Ac4g10047 Beta vulgaris HOM05D002447 ORTHO05D001298 5.7e-08 61.6 76 39.5
AUR62038081 Chenopodium quinoa HOM05D000294 ORTHO05D003990 5.7e-08 61.6 91 37.4
AUR62038169 Chenopodium quinoa HOM05D008822 ORTHO05D003990 5.7e-08 61.6 67 46.3
ECA246G2591 Erigeron canadensis HOM05D000651 ORTHO05D003990 5.7e-08 61.6 80 41.2
DCAR_007298 Daucus carota HOM05D008822 ORTHO05D003990 7.4e-08 61.2 102 33.3
Medtr4g084700 Medicago truncatula HOM05D000651 ORTHO05D003990 7.4e-08 61.2 96 33.3
Actinidia04066 Actinidia chinensis HOM05D000896 ORTHO05D000594 9.7e-08 60.8 87 37.9
Actinidia14976 Actinidia chinensis HOM05D000651 ORTHO05D003990 1.7e-07 60.1 72 40.3
Cc11_g08580 Coffea canephora HOM05D000651 ORTHO05D003990 1.7e-07 60.1 101 35.6
RcHm_v2.0_Chr7g0206321 Rosa chinensis HOM05D015272 ORTHO05D022694 1.7e-07 60.1 78 42.3
Eucgr.J02425 Eucalyptus grandis HOM05D000651 ORTHO05D003990 2.2e-07 59.7 70 44.3
Nitab4.5_0007359g0040 Nicotiana tabacum HOM05D000651 ORTHO05D003990 2.2e-07 59.7 116 35.3
PSO017G3155 Papaver somniferum HOM05D008822 ORTHO05D003990 2.2e-07 59.7 95 36.8
Ca_26223_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 2.8e-07 59.3 92 34.8
Lsat_1_v5_gn_3_55381 Lactuca sativa HOM05D008822 ORTHO05D003990 3.7e-07 58.9 69 39.1
Sc04g0005050 Simmondsia chinensis HOM05D000651 ORTHO05D003990 3.7e-07 58.9 115 32.2
Glyma.09G108100 Glycine max HOM05D000651 ORTHO05D003990 4.8e-07 58.5 121 33.1
Rhsim09G0097300 Rhododendron simsii HOM05D000651 ORTHO05D003990 4.8e-07 58.5 72 40.3
SalBow8G0982 Salvia bowleyana HOM05D008822 ORTHO05D003990 4.8e-07 58.5 96 33.3
Thhalv10015336m.g Eutrema salsugineum HOM05D008822 ORTHO05D003990 6.3e-07 58.2 102 31.4
CBR_g30682 Chara braunii HOM05D001085 ORTHO05D000895 8.2e-07 57.8 101 38.6
TWI31G1292 Tripterygium wilfordii HOM05D000651 ORTHO05D003990 8.2e-07 57.8 75 44.0
BcaC05g27560 Brassica carinata HOM05D003305 ORTHO05D001298 1.1e-06 57.4 92 37.0
C05p35440 Brassica napus HOM05D003305 ORTHO05D001298 1.1e-06 57.4 92 37.0
AUR62032767 Chenopodium quinoa HOM05D008822 ORTHO05D003990 1.1e-06 57.4 106 31.1
MBI19_g32901_MAGBIO Magnolia biondii HOM05D008822 ORTHO05D003990 1.1e-06 57.4 75 36.0
Gohir.D04G187300 Gossypium hirsutum HOM05D000651 ORTHO05D003990 1.4e-06 57.0 112 33.0
Gorai.012G181100 Gossypium raimondii HOM05D000651 ORTHO05D003990 1.4e-06 57.0 112 33.0
Thecc.02G282500 Theobroma cacao HOM05D000651 ORTHO05D003990 1.4e-06 57.0 123 31.7
CiPaw.03G044500 Carya illinoinensis HOM05D015316 ORTHO05D003990 1.8e-06 56.6 102 37.3
Hund01243 Selenicereus undatus HOM05D008822 ORTHO05D003990 1.8e-06 56.6 72 40.3
Aqoxy7G03756 Aquilegia oxysepala HOM05D000294 ORTHO05D003990 2.4e-06 56.2 72 33.3
AUR62000251 Chenopodium quinoa HOM05D002447 ORTHO05D001298 2.4e-06 56.2 71 40.8
Psat7g128680 Pisum sativum HOM05D000651 ORTHO05D003990 2.4e-06 56.2 96 32.3
Sopen10g027670 Solanum pennellii HOM05D000651 ORTHO05D003990 2.4e-06 56.2 75 37.3
BcaB07g33727 Brassica carinata HOM05D003305 ORTHO05D001298 3.1e-06 55.8 64 45.3
CAN.G698.4 Capsicum annuum HOM05D000651 ORTHO05D003990 3.1e-06 55.8 77 35.1
AUR62042685 Chenopodium quinoa HOM05D008822 ORTHO05D003990 3.1e-06 55.8 74 37.8
Ca_08976_v3 Cicer arietinum L. HOM05D000651 ORTHO05D003990 3.1e-06 55.8 71 38.0
MD17G1258400 Malus domestica HOM05D002447 ORTHO05D001298 3.1e-06 55.8 62 45.2
BolC5t32256H Brassica oleracea HOM05D003305 ORTHO05D011756 4.1e-06 55.5 92 35.9
Cc11_g08570 Coffea canephora HOM05D000651 ORTHO05D003990 4.1e-06 55.5 117 30.8
Gohir.A04G141600 Gossypium hirsutum HOM05D000651 ORTHO05D003990 4.1e-06 55.5 112 32.1
Medtr4g019680 Medicago truncatula HOM05D000651 ORTHO05D003990 4.1e-06 55.5 72 40.3
Nn4g24189 Nelumbo nucifera HOM05D003305 ORTHO05D001298 4.1e-06 55.5 60 45.0
Peaxi162Scf00047g00334 Petunia axillaris HOM05D000651 ORTHO05D003990 4.1e-06 55.5 70 37.1
Peaxi162Scf00253g01127 Petunia axillaris HOM05D000651 ORTHO05D003990 4.1e-06 55.5 70 37.1
Sc05g0000880 Simmondsia chinensis HOM05D001085 ORTHO05D000895 4.1e-06 55.5 59 47.5
Aqoxy3G00110 Aquilegia oxysepala HOM05D003305 ORTHO05D001298 5.3e-06 55.1 79 39.2
arahy.Tifrunner.gnm1.ann1.DY9A0E Arachis hypogaea HOM05D000651 ORTHO05D003990 5.3e-06 55.1 124 28.2
arahy.Tifrunner.gnm1.ann1.G0LEXN Arachis hypogaea HOM05D001085 ORTHO05D000895 5.3e-06 55.1 60 41.7
MSTRG.4568 Avicennia marina HOM05D003305 ORTHO05D001298 5.3e-06 55.1 65 41.5
CiPaw.04G078100 Carya illinoinensis HOM05D015316 ORTHO05D003990 5.3e-06 55.1 70 42.9
Haze_24548 Corylus avellana HOM05D001085 ORTHO05D000895 5.3e-06 55.1 63 44.4
Lalb_Chr05g0221801 Lupinus albus HOM05D003305 ORTHO05D001298 5.3e-06 55.1 96 35.4
arahy.Tifrunner.gnm1.ann1.7T6UUP Arachis hypogaea HOM05D000651 ORTHO05D003435 6.9e-06 54.7 124 29.0
A05p20990 Brassica napus HOM05D003305 ORTHO05D011756 6.9e-06 54.7 83 37.3
BraA05t21004Z Brassica rapa HOM05D003305 ORTHO05D011756 6.9e-06 54.7 83 37.3
Eucgr.J02424 Eucalyptus grandis HOM05D008822 ORTHO05D003990 6.9e-06 54.7 86 36.0
MD06G1045800 Malus domestica HOM05D015272 ORTHO05D003990 6.9e-06 54.7 98 31.6
SalBow1G4743 Salvia bowleyana HOM05D003305 ORTHO05D001298 6.9e-06 54.7 71 42.3
Aa31LG3G17790 Aethionema arabicum HOM05D008822 ORTHO05D003990 9.1e-06 54.3 72 38.9
Aa31LG8G4890 Aethionema arabicum HOM05D003305 ORTHO05D001298 9.1e-06 54.3 65 41.5
Aqoxy3G00030 Aquilegia oxysepala HOM05D002447 ORTHO05D001298 9.1e-06 54.3 68 41.2
BcaC08g43068 Brassica carinata HOM05D003305 ORTHO05D001298 9.1e-06 54.3 94 35.1
DCAR_014730 Daucus carota HOM05D003305 ORTHO05D001298 9.1e-06 54.3 108 31.5
Migut.K00900 Erythranthe guttata HOM05D002447 ORTHO05D001298 9.1e-06 54.3 68 41.2
Glyma.02G140900 Glycine max HOM05D001085 ORTHO05D000895 9.1e-06 54.3 63 39.7
Glyma.10G033100 Glycine max HOM05D001085 ORTHO05D000895 9.1e-06 54.3 63 41.3
Lj1g0014482 Lotus japonicus HOM05D001085 ORTHO05D000895 9.1e-06 54.3 64 42.2
Lj4g0023305 Lotus japonicus HOM05D000651 ORTHO05D003990 9.1e-06 54.3 94 30.9
THA.LOC104800215 Tarenaya hassleriana HOM05D008822 ORTHO05D003990 9.1e-06 54.3 83 37.3


User provided reference genes

Program Settings