Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02480 Aquilegia oxysepala HOM05D006869 ORTHO05D008641 8.6e-70 266.9 141 100.0
PSO732G0001 Papaver somniferum HOM05D006869 ORTHO05D008641 7.4e-37 157.5 121 74.4
PSO832G0919 Papaver somniferum HOM05D006869 ORTHO05D008641 1.3e-36 156.8 131 70.2
PSO675G8621 Papaver somniferum HOM05D006869 ORTHO05D008641 2.1e-36 156.0 128 70.3
TAR375G0341 Trochodendron aralioides HOM05D006869 ORTHO05D008641 3.7e-36 155.2 112 75.9
Ca_03396_v3 Cicer arietinum L. HOM05D006869 ORTHO05D008641 1.8e-35 152.9 99 82.8
Manes.15G174500 Manihot esculenta HOM05D006869 ORTHO05D008641 1.8e-35 152.9 120 72.5
CSS0028384 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.1e-35 152.1 113 71.7
CSS0030709 Camellia sinensis var. sinensis HOM05D006869 ORTHO05D008641 3.1e-35 152.1 113 71.7
Atru.chr6.1763 Acer truncatum HOM05D006869 ORTHO05D008641 5.3e-35 151.4 129 66.7
Lj3g0015338 Lotus japonicus HOM05D006869 ORTHO05D008641 6.9e-35 151.0 98 80.6
Phvul.005G061500 Phaseolus vulgaris HOM05D006869 ORTHO05D008641 6.9e-35 151.0 98 80.6
Sc22g0001440 Simmondsia chinensis HOM05D006869 ORTHO05D008641 1.2e-34 150.2 99 79.8
COL.COLO4_17099 Corchorus olitorius HOM05D006869 ORTHO05D008641 1.5e-34 149.8 136 61.0
Ciclev10033051m.g Citrus clementina HOM05D006869 ORTHO05D008641 2.0e-34 149.4 118 70.3
TWI15G0987 Tripterygium wilfordii HOM05D006869 ORTHO05D008641 2.0e-34 149.4 120 70.0
Cpa.g.sc6.427 Carica papaya HOM05D006869 ORTHO05D008641 3.4e-34 148.7 105 74.3
Glyma.13G259900 Glycine max HOM05D006869 ORTHO05D008641 3.4e-34 148.7 100 80.0
Nn1g00590 Nelumbo nucifera HOM05D006869 ORTHO05D008641 1.0e-33 147.1 121 67.8
Potri.001G145500 Populus trichocarpa HOM05D006869 ORTHO05D008641 1.0e-33 147.1 117 67.5
Medtr2g071640 Medicago truncatula HOM05D006869 ORTHO05D008641 1.3e-33 146.7 105 75.2
Prupe.5G042800 Prunus persica HOM05D006869 ORTHO05D008641 1.7e-33 146.4 132 62.9
Duzib205G1446 Durio zibethinus HOM05D006869 ORTHO05D008641 2.2e-33 146.0 120 66.7
MD06G1029000 Malus domestica HOM05D006869 ORTHO05D008641 2.2e-33 146.0 114 71.1
TPR.G26622 Trifolium pratense HOM05D006869 ORTHO05D008641 2.2e-33 146.0 103 79.6
Gohir.A09G198300 Gossypium hirsutum HOM05D006869 ORTHO05D008641 2.9e-33 145.6 120 66.7
VMungo1080G1596 Vigna mungo HOM05D006869 ORTHO05D008641 2.9e-33 145.6 98 77.6
CiPaw.12G061200 Carya illinoinensis HOM05D006869 ORTHO05D008641 6.5e-33 144.4 118 67.8
CiPaw.11G089700 Carya illinoinensis HOM05D006869 ORTHO05D008641 8.5e-33 144.1 106 71.7
CsaV3_1G016990 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.4e-32 143.3 121 62.8
CsaV3_3G049460 Cucumis sativus L. HOM05D006869 ORTHO05D008641 1.4e-32 143.3 121 62.8
Hma1.2p1_0414F.1_g147870 Hydrangea macrophylla HOM05D006869 ORTHO05D008641 1.9e-32 142.9 101 75.2
GSVIVG01013242001 Vitis vinifera HOM05D006869 ORTHO05D008641 2.5e-32 142.5 104 73.1
Eucgr.E00305 Eucalyptus grandis HOM05D006869 ORTHO05D008641 4.2e-32 141.7 101 74.3
Hund14421 Selenicereus undatus HOM05D006869 ORTHO05D008641 7.2e-32 141.0 99 76.8
Gohir.D09G192900 Gossypium hirsutum HOM05D006869 ORTHO05D008641 9.3e-32 140.6 137 59.1
PGR042G2539 Punica granatum HOM05D006869 ORTHO05D008641 1.2e-31 140.2 120 64.2
Thecc.03G232900 Theobroma cacao HOM05D006869 ORTHO05D008641 1.6e-31 139.8 137 59.9
FvH4_5g21430 Fragaria vesca HOM05D006869 ORTHO05D008641 2.7e-31 139.0 121 64.5
Migut.D00490 Erythranthe guttata HOM05D006869 ORTHO05D008641 3.6e-31 138.7 100 72.0
MELO3C003378.2 Cucumis melo HOM05D006869 ORTHO05D008641 4.6e-31 138.3 131 60.3
Glyma.15G248100 Glycine max HOM05D006869 ORTHO05D008641 6.1e-31 137.9 97 78.4
Actinidia09229 Actinidia chinensis HOM05D002067 ORTHO05D002244 1.3e-30 136.7 115 66.1
arahy.Tifrunner.gnm1.ann1.TLF144 Arachis hypogaea HOM05D006869 ORTHO05D008641 1.3e-30 136.7 117 63.2
RcHm_v2.0_Chr7g0208861 Rosa chinensis HOM05D006869 ORTHO05D008641 1.8e-30 136.3 118 64.4
PGSC0003DMG400026597 Solanum tuberosum HOM05D006869 ORTHO05D008641 1.8e-30 136.3 102 71.6
arahy.Tifrunner.gnm1.ann1.U4TMK5 Arachis hypogaea HOM05D006869 ORTHO05D008641 3.0e-30 135.6 103 68.0
Sopen06g021250 Solanum pennellii HOM05D006869 ORTHO05D008641 3.9e-30 135.2 119 63.0
CANSAT21G0218 Cannabis sativa HOM05D006869 ORTHO05D008641 6.7e-30 134.4 139 59.0
FAN04G2266 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.7e-30 134.0 127 62.2
FAN08G2623 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.7e-30 134.0 127 62.2
FAN13G1368 Fragaria x ananassa HOM05D006869 ORTHO05D008641 8.7e-30 134.0 112 66.1
arahy.Tifrunner.gnm1.ann1.4F5UFQ Arachis hypogaea HOM05D006869 ORTHO05D008641 2.5e-29 132.5 103 67.0
FAN18G0870 Fragaria x ananassa HOM05D006869 ORTHO05D008641 2.5e-29 132.5 127 61.4
THA.LOC104798477 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 4.3e-29 131.7 99 70.7
MSTRG.17527 Avicennia marina HOM05D006869 ORTHO05D008641 5.7e-29 131.3 100 69.0
Lalb_Chr25g0285441 Lupinus albus HOM05D006869 ORTHO05D008641 5.7e-29 131.3 112 66.1
DCAR_005606 Daucus carota HOM05D006869 ORTHO05D008641 4.8e-28 128.3 137 54.0
ClCG09G012310 Citrullus lanatus HOM05D006869 ORTHO05D008641 6.3e-28 127.9 140 52.9
DCAR_024975 Daucus carota HOM05D006869 ORTHO05D008641 6.3e-28 127.9 115 60.9
Sabra01G0114100 Salix brachista HOM05D006869 ORTHO05D008641 1.1e-27 127.1 134 54.5
THA.LOC104798593 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 2.4e-27 125.9 106 62.3
Gorai.006G215800 Gossypium raimondii HOM05D006869 ORTHO05D008641 3.1e-27 125.6 174 47.7
AT1G32370 Arabidopsis thaliana HOM05D006869 ORTHO05D008641 6.9e-27 124.4 99 68.7
Carub.0001s3075 Capsella rubella HOM05D006869 ORTHO05D008641 1.2e-26 123.6 99 67.7
ECA233G4479 Erigeron canadensis HOM05D006869 ORTHO05D008641 1.2e-26 123.6 110 60.9
Thhalv10009100m.g Eutrema salsugineum HOM05D006869 ORTHO05D008641 2.6e-26 122.5 99 67.7
Actinidia14827 Actinidia chinensis HOM05D006869 ORTHO05D008641 3.4e-26 122.1 92 69.6
HPP92_026375 Vanilla planifolia HOM05D006869 ORTHO05D008641 4.5e-26 121.7 110 58.2
AL1G46570 Arabidopsis lyrata HOM05D006869 ORTHO05D008641 7.7e-26 120.9 99 67.7
BcaC05g27275 Brassica carinata HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 66.7
A09p33790 Brassica napus HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 66.7
C05p31830 Brassica napus HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 66.7
BolC5t31911H Brassica oleracea HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 66.7
BraA09t38929Z Brassica rapa HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 66.7
Sp1g28510 Schrenkiella parvula HOM05D006869 ORTHO05D008641 1.7e-25 119.8 99 65.7
Nitab4.5_0003100g0080 Nicotiana tabacum HOM05D006869 ORTHO05D008641 2.2e-25 119.4 165 49.1
BcaB07g32921 Brassica carinata HOM05D006869 ORTHO05D008641 2.9e-25 119.0 107 62.6
HanXRQChr08g0227941 Helianthus annuus HOM05D006869 ORTHO05D008641 2.9e-25 119.0 118 55.9
CARHR031750 Cardamine hirsuta HOM05D006869 ORTHO05D008641 5.0e-25 118.2 99 67.7
unitig_746.g26748 Utricularia gibba HOM05D006869 ORTHO05D008641 8.5e-25 117.5 100 64.0
Aa31LG2G13630 Aethionema arabicum HOM05D006869 ORTHO05D008641 1.1e-24 117.1 99 66.7
Zm00001eb024260 Zea mays HOM05D006869 ORTHO05D008641 3.2e-24 115.5 113 56.6
Os02g0279600 Oryza sativa ssp. japonica HOM05D006869 ORTHO05D008641 5.5e-24 114.8 95 64.2
THA.LOC104822843 Tarenaya hassleriana HOM05D006869 ORTHO05D008641 3.6e-23 112.1 100 59.0
Dinv25192 Davidia involucrata HOM05D006869 ORTHO05D008641 5.1e-22 108.2 122 51.6
Oeu015441.1 Olea europaea HOM05D006869 ORTHO05D008641 3.3e-21 105.5 90 62.2
Sed0006536 Sechium edule HOM05D006869 ORTHO05D008641 4.4e-21 105.1 81 66.7
SEGI_28722 Sequoiadendron giganteum HOM05D006869 ORTHO05D008641 1.7e-20 103.2 97 61.9
SGA_v2.0_scaffold94G28479 Striga asiatica HOM05D006869 ORTHO05D008641 1.7e-20 103.2 91 62.6
MBI04_g13865_MAGBIO Magnolia biondii HOM05D006869 ORTHO05D008641 6.3e-20 101.3 79 65.8
Rhsim07G0123600 Rhododendron simsii HOM05D006869 ORTHO05D008641 1.8e-19 99.8 72 70.8
EL10Ac5g12174 Beta vulgaris HOM05D006869 ORTHO05D008641 2.4e-19 99.4 69 71.0
vmacro14155 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 5.3e-19 98.2 67 71.6
ATR0049G078 Amborella trichopoda HOM05D006869 ORTHO05D008641 5.9e-18 94.7 76 64.5
Cc08_g02310 Coffea canephora HOM05D006869 ORTHO05D008641 1.0e-17 94.0 66 71.2
Ah.07g200090 Amaranthus hybridus HOM05D006869 ORTHO05D008641 2.9e-17 92.4 70 65.7
Lsat_1_v5_gn_6_67180 Lactuca sativa HOM05D006869 ORTHO05D008641 3.8e-17 92.0 66 71.2
Peaxi162Scf00497g00098 Petunia axillaris HOM05D006869 ORTHO05D008641 6.5e-17 91.3 80 62.5
Nitab4.5_0004658g0060 Nicotiana tabacum HOM05D006869 ORTHO05D008641 1.9e-16 89.7 71 66.2
SalBow6G5905 Salvia bowleyana HOM05D006869 ORTHO05D008641 3.2e-16 89.0 63 69.8
Psat1g009440 Pisum sativum HOM05D006869 ORTHO05D008641 9.4e-16 87.4 57 82.5
BcaC05g27873 Brassica carinata HOM05D006869 ORTHO05D008641 2.2e-12 76.3 125 47.2
C05p38760 Brassica napus HOM05D006869 ORTHO05D008641 2.2e-12 76.3 125 47.2
BolC5t32616H Brassica oleracea HOM05D006869 ORTHO05D008641 3.7e-12 75.5 92 55.4
AagrBONN_evm.TU.Sc2ySwM_228.2858 Anthoceros agrestis HOM05D006869 ORTHO05D008641 1.4e-11 73.6 97 47.4
Haze_08288 Corylus avellana HOM05D006869 ORTHO05D008641 4.5e-10 68.6 42 81.0
Mapoly0009s0146 Marchantia polymorpha HOM05D006869 ORTHO05D008641 1.0e-09 67.4 95 41.1
PGR142G3578 Punica granatum HOM05D006869 ORTHO05D008641 2.9e-09 65.9 46 63.0
vmacro23515 Vaccinium macrocarpon HOM05D006869 ORTHO05D008641 2.9e-09 65.9 43 72.1
Dinv28924 Davidia involucrata HOM05D002067 ORTHO05D002244 5.0e-09 65.1 56 62.5
Zm00001eb390630 Zea mays HOM05D006869 ORTHO05D008641 8.5e-09 64.3 52 65.4
Sed0003750 Sechium edule HOM05D006869 ORTHO05D008641 6.7e-06 54.7 62 53.2


User provided reference genes

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