Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02472 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.4e-265 919.1 465 100.0
TAR629G3002 Trochodendron aralioides HOM05D005239 ORTHO05D006698 1.2e-179 633.6 461 73.5
TAR636G2805 Trochodendron aralioides HOM05D005239 ORTHO05D006698 4.4e-171 605.1 462 70.1
Nn6g33642 Nelumbo nucifera HOM05D005239 ORTHO05D006698 4.0e-164 582.0 465 67.3
Cfa011001 Carpinus fangiana HOM05D002067 ORTHO05D001060 1.6e-157 560.1 457 65.9
Dinv43567 Davidia involucrata HOM05D005239 ORTHO05D006698 4.4e-155 552.0 404 70.8
CiPaw.13G020400 Carya illinoinensis HOM05D005239 ORTHO05D006698 1.7e-154 550.1 458 65.9
PSO170G2576 Papaver somniferum HOM05D005239 ORTHO05D006698 2.9e-154 549.3 467 63.6
PSO302G0170 Papaver somniferum HOM05D005239 ORTHO05D006698 9.3e-153 544.3 469 63.3
CSS0007844 Camellia sinensis var. sinensis HOM05D005239 ORTHO05D006698 4.6e-152 542.0 461 62.9
CsaV3_3G010220 Cucumis sativus L. HOM05D005239 ORTHO05D006698 2.3e-151 539.7 462 63.4
QL04p024849 Quercus lobata HOM05D005239 ORTHO05D006698 3.0e-151 539.3 362 73.2
MELO3C006242.2 Cucumis melo HOM05D005239 ORTHO05D006698 1.9e-150 536.6 463 62.9
Hma1.2p1_0601F.1_g187220 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 1.9e-150 536.6 469 62.7
GSVIVG01018386001 Vitis vinifera HOM05D005239 ORTHO05D006698 1.3e-149 533.9 386 70.5
Ciclev10020370m.g Citrus clementina HOM05D005239 ORTHO05D006698 1.1e-148 530.8 355 75.2
Atru.chr9.1540 Acer truncatum HOM05D005239 ORTHO05D006698 1.8e-148 530.0 352 75.3
VMungo0720G0476 Vigna mungo HOM05D005239 ORTHO05D006698 2.6e-147 526.2 412 68.2
Dinv44000 Davidia involucrata HOM05D005239 ORTHO05D001060 4.4e-147 525.4 365 72.6
TWI14G1099 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.4e-147 525.4 469 62.7
PGR119G0794 Punica granatum HOM05D005239 ORTHO05D006698 9.9e-147 524.2 415 66.0
CDE04G1215 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 6.4e-146 521.5 468 61.8
Actinidia21601 Actinidia chinensis HOM05D005239 ORTHO05D006698 8.4e-146 521.2 379 69.9
Glyma.20G243400 Glycine max HOM05D005239 ORTHO05D006698 8.4e-146 521.2 369 72.4
MD08G1235300 Malus domestica HOM05D005239 ORTHO05D006698 1.1e-145 520.8 447 62.9
ATR1153G024 Amborella trichopoda HOM05D005239 ORTHO05D006698 1.4e-145 520.4 450 62.7
Lj5g0010357 Lotus japonicus HOM05D005239 ORTHO05D006698 1.9e-145 520.0 352 75.3
Sed0010493 Sechium edule HOM05D005239 ORTHO05D006698 1.9e-145 520.0 416 65.9
Prupe.1G571600 Prunus persica HOM05D005239 ORTHO05D006698 2.4e-145 519.6 352 73.6
CANSAT54G1536 Cannabis sativa HOM05D005239 ORTHO05D006698 5.4e-145 518.5 407 68.8
ECA234G1231 Erigeron canadensis HOM05D005239 ORTHO05D006698 5.4e-145 518.5 417 64.3
Sabra02G0168400 Salix brachista HOM05D005239 ORTHO05D006698 5.4e-145 518.5 460 62.6
DCAR_029633 Daucus carota HOM05D005239 ORTHO05D006698 1.2e-144 517.3 356 72.2
Sed0027364 Sechium edule HOM05D005239 ORTHO05D006698 1.2e-144 517.3 443 62.1
Haze_02934 Corylus avellana HOM05D005239 ORTHO05D006698 2.7e-144 516.2 483 59.8
ClCG05G002730 Citrullus lanatus HOM05D005239 ORTHO05D006698 4.6e-144 515.4 417 66.2
Peaxi162Scf01144g00013 Petunia axillaris HOM05D005239 ORTHO05D006698 4.6e-144 515.4 366 71.3
TWI59G0212 Tripterygium wilfordii HOM05D005239 ORTHO05D006698 4.6e-144 515.4 456 60.3
Duzib151G1142 Durio zibethinus HOM05D005239 ORTHO05D006698 7.9e-144 514.6 385 69.1
Gohir.A09G201600 Gossypium hirsutum HOM05D005239 ORTHO05D006698 7.9e-144 514.6 465 61.9
Gorai.006G218900 Gossypium raimondii HOM05D005239 ORTHO05D006698 1.0e-143 514.2 465 61.5
vmacro21097 Vaccinium macrocarpon HOM05D005239 ORTHO05D006698 1.0e-143 514.2 459 61.2
Ah.06g191320 Amaranthus hybridus HOM05D005239 ORTHO05D006698 1.7e-143 513.5 456 62.1
RcHm_v2.0_Chr6g0273481 Rosa chinensis HOM05D005239 ORTHO05D006698 3.0e-143 512.7 452 61.3
Gohir.D09G195500 Gossypium hirsutum HOM05D005239 ORTHO05D006698 1.1e-142 510.8 465 61.3
Nitab4.5_0004264g0020 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.1e-142 510.8 438 63.9
Phvul.007G006700 Phaseolus vulgaris HOM05D005239 ORTHO05D006698 1.1e-142 510.8 389 68.9
Eucgr.H02846 Eucalyptus grandis HOM05D005239 ORTHO05D006698 1.5e-142 510.4 455 60.4
Sc20g0003020 Simmondsia chinensis HOM05D005239 ORTHO05D006698 1.9e-142 510.0 365 71.8
COL.COLO4_20862 Corchorus olitorius HOM05D005239 ORTHO05D006698 5.6e-142 508.4 361 69.8
HanXRQChr17g0562471 Helianthus annuus HOM05D005239 ORTHO05D006698 5.6e-142 508.4 457 61.5
arahy.Tifrunner.gnm1.ann1.X9CQTL Arachis hypogaea HOM05D005239 ORTHO05D006698 7.3e-142 508.1 351 74.1
Potri.002G216100 Populus trichocarpa HOM05D005239 ORTHO05D006698 9.6e-142 507.7 457 62.1
Manes.05G061000 Manihot esculenta HOM05D005239 ORTHO05D006698 1.6e-141 506.9 465 61.7
arahy.Tifrunner.gnm1.ann1.XN1C7B Arachis hypogaea HOM05D005239 ORTHO05D006698 2.1e-141 506.5 351 73.8
Thecc.04G216000 Theobroma cacao HOM05D005239 ORTHO05D006698 2.1e-141 506.5 464 61.2
Rhsim01G0145300 Rhododendron simsii HOM05D005239 ORTHO05D006698 1.1e-140 504.2 497 57.7
Cc02_g25930 Coffea canephora HOM05D005239 ORTHO05D006698 1.4e-140 503.8 422 64.5
FvH4_2g12720 Fragaria vesca HOM05D005239 ORTHO05D006698 1.4e-140 503.8 412 64.3
CAN.G1480.7 Capsicum annuum HOM05D005239 ORTHO05D006698 9.0e-140 501.1 362 71.0
Sopen01g032450 Solanum pennellii HOM05D005239 ORTHO05D006698 5.8e-139 498.4 421 63.2
EL10Ac4g08842 Beta vulgaris HOM05D005239 ORTHO05D006698 9.9e-139 497.7 454 60.4
Solyc01g080860.3 Solanum lycopersicum HOM05D005239 ORTHO05D006698 9.9e-139 497.7 421 62.9
FAN27G2303 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.2e-138 496.5 465 59.8
TPR.G10426 Trifolium pratense HOM05D005239 ORTHO05D006698 2.2e-138 496.5 363 69.4
AUR62035533 Chenopodium quinoa HOM05D005239 ORTHO05D006698 4.9e-138 495.4 465 59.4
AUR62041654 Chenopodium quinoa HOM05D005239 ORTHO05D006698 4.9e-138 495.4 469 59.3
THA.LOC104802511 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 8.4e-138 494.6 411 62.5
FAN15G3107 Fragaria x ananassa HOM05D005239 ORTHO05D006698 1.9e-137 493.4 465 59.6
Medtr1g116110 Medicago truncatula HOM05D005239 ORTHO05D006698 5.5e-137 491.9 394 65.5
Lalb_Chr02g0143811 Lupinus albus HOM05D005239 ORTHO05D006698 2.1e-136 490.0 369 69.1
Os01g0527700 Oryza sativa ssp. japonica HOM05D005239 ORTHO05D006698 2.7e-136 489.6 359 68.5
Ca_11344_v3 Cicer arietinum L. HOM05D005239 ORTHO05D006698 4.6e-136 488.8 361 68.4
Psat6g232360 Pisum sativum HOM05D005239 ORTHO05D006698 1.8e-135 486.9 365 68.8
THA.LOC104817164 Tarenaya hassleriana HOM05D005239 ORTHO05D006698 5.1e-135 485.3 403 62.8
Aa31LG1G26110 Aethionema arabicum HOM05D005239 ORTHO05D006698 6.7e-135 485.0 363 66.1
PGSC0003DMG400001672 Solanum tuberosum HOM05D005239 ORTHO05D006698 6.7e-135 485.0 448 59.2
SGA_v2.0_scaffold69G23296 Striga asiatica HOM05D005239 ORTHO05D006698 1.5e-134 483.8 381 65.6
SGA_v2.0_scaffold52G19274 Striga asiatica HOM05D005239 ORTHO05D006698 2.5e-134 483.0 381 65.4
HPP92_001886 Vanilla planifolia HOM05D005239 ORTHO05D006698 2.5e-134 483.0 405 63.2
Zm00001eb402310 Zea mays HOM05D005239 ORTHO05D006698 2.5e-134 483.0 359 67.4
Oeu002884.1 Olea europaea HOM05D005239 ORTHO05D006698 1.6e-133 480.3 478 56.7
Lj9A547G68 Lonicera japonica HOM05D005239 ORTHO05D006698 2.1e-133 479.9 337 73.6
Thhalv10001456m.g Eutrema salsugineum HOM05D005239 ORTHO05D006698 2.4e-132 476.5 404 60.4
Sp4g26610 Schrenkiella parvula HOM05D005239 ORTHO05D006698 5.8e-131 471.9 403 61.0
Carub.0004s2708 Capsella rubella HOM05D005239 ORTHO05D006698 7.6e-131 471.5 404 59.7
AL4G43540 Arabidopsis lyrata HOM05D005239 ORTHO05D006698 1.3e-130 470.7 381 62.7
unitig_26.g9718 Utricularia gibba HOM05D005239 ORTHO05D006698 7.1e-129 464.9 456 56.4
AT2G44520 Arabidopsis thaliana HOM05D005239 ORTHO05D006698 1.2e-128 464.2 362 64.4
BcaB06g29384 Brassica carinata HOM05D005239 ORTHO05D006698 3.5e-128 462.6 352 65.6
BolC4t28610H Brassica oleracea HOM05D005239 ORTHO05D006698 1.0e-127 461.1 370 64.1
BcaC02g07098 Brassica carinata HOM05D005239 ORTHO05D006698 1.8e-127 460.3 408 59.8
BraA04t18797Z Brassica rapa HOM05D005239 ORTHO05D006698 1.9e-126 456.8 456 55.5
C04p05410 Brassica napus HOM05D005239 ORTHO05D006698 2.0e-123 446.8 358 64.2
BolC4t22181H Brassica oleracea HOM05D005239 ORTHO05D006698 2.0e-123 446.8 358 64.2
Lsat_1_v5_gn_4_39040 Lactuca sativa HOM05D005239 ORTHO05D006698 2.6e-123 446.4 462 56.1
Zm00001eb005400 Zea mays HOM05D005239 ORTHO05D006698 5.0e-122 442.2 336 67.6
C04p71050 Brassica napus HOM05D000073 ORTHO05D006698 1.1e-118 431.0 344 65.1
BcaNung07053 Brassica carinata HOM05D005239 ORTHO05D006698 1.9e-118 430.3 354 62.4
A04p33360 Brassica napus HOM05D000073 ORTHO05D006698 9.7e-118 427.9 336 64.9
Nitab4.5_0001476g0120 Nicotiana tabacum HOM05D005239 ORTHO05D006698 1.4e-116 424.1 437 55.8
AagrBONN_evm.TU.Sc2ySwM_369.187 Anthoceros agrestis HOM05D005239 ORTHO05D006698 1.8e-116 423.7 372 58.1
BcaC02g12301 Brassica carinata HOM05D005239 ORTHO05D006698 4.1e-116 422.5 343 63.0
MD15G1426600 Malus domestica HOM05D005239 ORTHO05D006698 1.8e-111 407.1 309 67.6
Duzib212G0896 Durio zibethinus HOM05D005239 ORTHO05D006698 1.5e-110 404.1 363 59.2
SEGI_24425 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 1.8e-108 397.1 272 71.0
SMO364G0841 Selaginella moellendorffii HOM05D005239 ORTHO05D006698 9.4e-105 384.8 352 55.1
Cpa.g.sc20.28 Carica papaya HOM05D005239 ORTHO05D006698 6.7e-103 378.6 236 77.1
Migut.B01467 Erythranthe guttata HOM05D005239 ORTHO05D006698 2.6e-102 376.7 332 62.0
Actinidia33289 Actinidia chinensis HOM05D005239 ORTHO05D006698 3.3e-102 376.3 247 76.1
Mapoly0029s0153 Marchantia polymorpha HOM05D005239 ORTHO05D006698 1.7e-101 374.0 364 54.4
Hma1.2p1_0601F.1_g187230 Hydrangea macrophylla HOM05D005239 ORTHO05D006698 3.3e-94 349.7 308 63.3
CBR_g3821 Chara braunii HOM05D005239 ORTHO05D006698 7.0e-92 342.0 299 56.5
CDE12G0888 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.2e-90 337.0 256 68.4
CARHR139710 Cardamine hirsuta HOM05D005239 ORTHO05D006698 2.6e-86 323.6 247 64.4
Pp3c14_19200 Physcomitrium patens HOM05D005239 ORTHO05D006698 5.7e-86 322.4 261 61.7
PSO357G0304 Papaver somniferum HOM05D005239 ORTHO05D006698 2.8e-85 320.1 201 80.1
CAN.G74.42 Capsicum annuum HOM05D005239 ORTHO05D006698 2.7e-83 313.5 302 56.3
Aqoxy5G02001 Aquilegia oxysepala HOM05D005239 ORTHO05D006698 1.7e-82 310.8 280 63.2
Cre12.g516350 Chlamydomonas reinhardtii HOM05D005239 ORTHO05D006698 3.4e-78 296.6 314 51.0
MCO03G363 Micromonas commoda HOM05D005239 ORTHO05D006698 6.1e-72 275.8 281 52.0
PRCOL_00000009 Prasinoderma coloniale HOM05D005239 ORTHO05D006698 4.9e-69 266.2 342 43.9
Oeu037395.1 Olea europaea HOM05D005239 ORTHO05D006698 1.1e-68 265.0 323 51.4
BraA05t19443Z Brassica rapa HOM05D005239 ORTHO05D006698 1.5e-65 254.6 288 49.0
A05p04670 Brassica napus HOM05D005239 ORTHO05D006698 3.1e-63 246.9 290 49.7
MD15G1426900 Malus domestica HOM05D005239 ORTHO05D006698 1.0e-58 231.9 192 62.0
BcaB02g08828 Brassica carinata HOM05D005239 ORTHO05D006698 7.8e-51 205.7 243 49.4
SHI13675 Sapria himalayana HOM05D005239 ORTHO05D006698 8.1e-48 195.7 204 53.9
Cfa027222 Carpinus fangiana HOM05D005239 ORTHO05D006698 2.1e-40 171.0 317 37.5
FAN24G3432 Fragaria x ananassa HOM05D005239 ORTHO05D006698 2.1e-40 171.0 166 56.6
PGR004G1759 Punica granatum HOM05D005239 ORTHO05D006698 1.6e-32 144.8 121 66.1
PSO081G0040 Papaver somniferum HOM05D005239 ORTHO05D006698 5.8e-30 136.3 83 83.1
TPR.G37315 Trifolium pratense HOM05D005239 ORTHO05D006698 4.2e-28 130.2 83 73.5
Glyma.10G293300 Glycine max HOM05D005239 ORTHO05D006698 3.0e-26 124.0 76 76.3
RcHm_v2.0_Chr6g0271171 Rosa chinensis HOM05D005239 ORTHO05D006698 7.4e-25 119.4 71 81.7
RcHm_v2.0_Chr7g0200821 Rosa chinensis HOM05D005239 ORTHO05D006698 1.2e-22 112.1 71 77.5
CDE12G0056 Ceratophyllum demersum HOM05D005239 ORTHO05D006698 2.2e-21 107.8 67 74.6
SEGI_27712 Sequoiadendron giganteum HOM05D005239 ORTHO05D006698 5.3e-15 86.7 57 75.4
Cc02_g25970 Coffea canephora HOM05D005239 ORTHO05D006698 3.8e-13 80.5 100 49.0
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.0e-10 72.4 54 70.4


User provided reference genes

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