Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02467 Aquilegia oxysepala HOM05D007785 ORTHO05D008997 9.3e-65 250.0 120 100.0
TAR374G0344 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.5e-17 92.4 103 48.5
TAR636G3686 Trochodendron aralioides HOM05D007785 ORTHO05D008997 5.5e-17 91.3 81 58.0
Nn1g00585 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.7e-16 89.0 81 59.3
Atru.chr5.15 Acer truncatum HOM05D007785 ORTHO05D008997 6.1e-16 87.8 81 54.3
TAR375G1071 Trochodendron aralioides HOM05D007785 ORTHO05D008997 2.3e-15 85.9 95 47.4
Sabra01G0113200 Salix brachista HOM05D007785 ORTHO05D008997 1.5e-14 83.2 82 50.0
Nn6g33639 Nelumbo nucifera HOM05D007785 ORTHO05D008997 2.0e-14 82.8 79 55.7
Potri.001G145066 Populus trichocarpa HOM05D007785 ORTHO05D008997 2.6e-14 82.4 82 52.4
CSS0006779 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 6.3e-13 77.8 78 52.6
Peaxi162Scf00901g00032 Petunia axillaris HOM05D007785 ORTHO05D008997 6.3e-13 77.8 83 47.0
Ciclev10033202m.g Citrus clementina HOM05D007785 ORTHO05D008997 1.8e-12 76.3 84 51.2
QL04p025073 Quercus lobata HOM05D007785 ORTHO05D008997 1.2e-11 73.6 87 49.4
Dinv43998 Davidia involucrata HOM05D007785 ORTHO05D008997 2.0e-11 72.8 72 54.2
COL.COLO4_17092 Corchorus olitorius HOM05D012518 ORTHO05D008997 4.5e-11 71.6 82 46.3
Dinv28928 Davidia involucrata HOM05D007785 ORTHO05D008997 4.5e-11 71.6 79 50.6
Actinidia05806 Actinidia chinensis HOM05D007785 ORTHO05D008997 5.9e-11 71.2 78 48.7
Potri.003G089100 Populus trichocarpa HOM05D007785 ORTHO05D008997 1.0e-10 70.5 79 51.9
Gohir.A03G002300 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.3e-10 70.1 82 46.3
Hma1.2p1_0021F.1_g014470 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 1.3e-10 70.1 77 49.4
Lalb_Chr05g0214041 Lupinus albus HOM05D007785 ORTHO05D008997 1.3e-10 70.1 71 50.7
Glyma.01G199900 Glycine max HOM05D007785 ORTHO05D008997 2.3e-10 69.3 72 52.8
Thecc.03G232200 Theobroma cacao HOM05D012518 ORTHO05D008997 2.9e-10 68.9 85 50.6
Gohir.A13G011800 Gossypium hirsutum HOM05D007785 ORTHO05D008997 3.8e-10 68.6 85 50.6
Glyma.11G042100 Glycine max HOM05D007785 ORTHO05D008997 5.0e-10 68.2 72 51.4
CiPaw.13G020000 Carya illinoinensis HOM05D007785 ORTHO05D008997 6.6e-10 67.8 77 51.9
Peaxi162Scf01144g00004 Petunia axillaris HOM05D007785 ORTHO05D008997 1.1e-09 67.0 78 47.4
arahy.Tifrunner.gnm1.ann1.TXA0XA Arachis hypogaea HOM05D007785 ORTHO05D008997 1.9e-09 66.2 78 47.4
arahy.Tifrunner.gnm1.ann1.XHE4AQ Arachis hypogaea HOM05D007785 ORTHO05D008997 1.9e-09 66.2 78 47.4
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 1.9e-09 66.2 83 45.8
Glyma.05G113700 Glycine max HOM05D007785 ORTHO05D008997 3.3e-09 65.5 71 53.5
ClCG05G002700 Citrullus lanatus HOM05D007785 ORTHO05D008997 4.2e-09 65.1 93 44.1
PGSC0003DMG400001700 Solanum tuberosum HOM05D007785 ORTHO05D008997 4.2e-09 65.1 80 46.2
Gohir.D08G179100 Gossypium hirsutum HOM05D012518 ORTHO05D008997 7.2e-09 64.3 79 46.8
Hma1.2p1_0601F.1_g187290 Hydrangea macrophylla HOM05D007785 ORTHO05D008997 9.5e-09 63.9 77 51.9
Nitab4.5_0001476g0130 Nicotiana tabacum HOM05D007785 ORTHO05D008997 9.5e-09 63.9 78 47.4
Gohir.D03G170000 Gossypium hirsutum HOM05D012518 ORTHO05D008997 1.6e-08 63.2 82 42.7
Gorai.003G180300 Gossypium raimondii HOM05D012518 ORTHO05D008997 1.6e-08 63.2 82 42.7
Lalb_Chr09g0329531 Lupinus albus HOM05D007785 ORTHO05D008997 1.6e-08 63.2 72 54.2
Solyc01g080890.2 Solanum lycopersicum HOM05D007785 ORTHO05D008997 1.6e-08 63.2 81 49.4
Ca_22059_v3 Cicer arietinum L. HOM05D007785 ORTHO05D008997 2.8e-08 62.4 73 50.7
MSTRG.17094 Avicennia marina HOM05D007785 ORTHO05D008997 3.6e-08 62.0 77 46.8
Haze_02930 Corylus avellana HOM05D007785 ORTHO05D008997 3.6e-08 62.0 79 50.6
Gohir.A08G158700 Gossypium hirsutum HOM05D012518 ORTHO05D008997 3.6e-08 62.0 79 45.6
Gohir.D13G012700 Gossypium hirsutum HOM05D007785 ORTHO05D008997 4.7e-08 61.6 81 49.4
Manes.15G169900 Manihot esculenta HOM05D007785 ORTHO05D008997 4.7e-08 61.6 77 46.8
Phvul.002G005800 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 4.7e-08 61.6 76 48.7
Cc02_g26020 Coffea canephora HOM05D007785 ORTHO05D008997 6.1e-08 61.2 77 46.8
Gorai.004G187600 Gossypium raimondii HOM05D012518 ORTHO05D008997 6.1e-08 61.2 79 45.6
MD07G1083000 Malus domestica HOM05D007785 ORTHO05D008997 6.1e-08 61.2 85 47.1
Nitab4.5_0003887g0040 Nicotiana tabacum HOM05D007785 ORTHO05D008997 6.1e-08 61.2 69 50.7
Nitab4.5_0006705g0010 Nicotiana tabacum HOM05D007785 ORTHO05D008997 6.1e-08 61.2 76 47.4
VMungo0251G2587 Vigna mungo HOM05D007785 ORTHO05D008997 6.1e-08 61.2 94 43.6
CSS0022493 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 8.0e-08 60.8 78 46.2
Medtr4g098710 Medicago truncatula HOM05D007785 ORTHO05D008997 1.0e-07 60.5 80 47.5
Psat4g078560 Pisum sativum HOM05D007785 ORTHO05D008997 1.0e-07 60.5 79 49.4
Sopen01g032480 Solanum pennellii HOM05D007785 ORTHO05D008997 1.0e-07 60.5 81 49.4
SalBow4G1855 Salvia bowleyana HOM05D007785 ORTHO05D008997 1.4e-07 60.1 79 43.0
BcaC05g27283 Brassica carinata HOM05D010231 ORTHO05D012284 1.8e-07 59.7 77 46.8
BcaC05g27853 Brassica carinata HOM05D010231 ORTHO05D012284 1.8e-07 59.7 81 50.6
BolC5t32585H Brassica oleracea HOM05D010231 ORTHO05D012284 1.8e-07 59.7 81 50.6
CSS0013282 Camellia sinensis var. sinensis HOM05D007785 ORTHO05D008997 1.8e-07 59.7 78 46.2
Migut.B01462 Erythranthe guttata HOM05D007785 ORTHO05D008997 1.8e-07 59.7 79 48.1
A05p24820 Brassica napus HOM05D010231 ORTHO05D012284 2.3e-07 59.3 73 49.3
C05p31910 Brassica napus HOM05D010231 ORTHO05D012284 2.3e-07 59.3 77 46.8
BraA05t21365Z Brassica rapa HOM05D010231 ORTHO05D012284 2.3e-07 59.3 73 49.3
Glyma.17G153500 Glycine max HOM05D007785 ORTHO05D008997 2.3e-07 59.3 71 50.7
Gorai.013G013800 Gossypium raimondii HOM05D007785 ORTHO05D008997 2.3e-07 59.3 81 48.1
Sed0022240 Sechium edule HOM05D007785 ORTHO05D008997 2.3e-07 59.3 86 44.2
Gohir.D09G192932 Gossypium hirsutum HOM05D012518 ORTHO05D008997 3.0e-07 58.9 87 44.8
Prupe.2G109900 Prunus persica HOM05D007785 ORTHO05D008997 3.0e-07 58.9 101 41.6
BcaB03g13730 Brassica carinata HOM05D010231 ORTHO05D012284 4.0e-07 58.5 74 48.6
Lj4g0027032 Lotus japonicus HOM05D007785 ORTHO05D008997 5.2e-07 58.2 79 51.9
Nitab4.5_0000166g0090 Nicotiana tabacum HOM05D007785 ORTHO05D008997 5.2e-07 58.2 76 46.1
Hund11261 Selenicereus undatus HOM05D018059 ORTHO05D008997 5.2e-07 58.2 79 46.8
Migut.N01702 Erythranthe guttata HOM05D007785 ORTHO05D008997 8.9e-07 57.4 77 42.9
Gorai.006G216000 Gossypium raimondii HOM05D012518 ORTHO05D008997 8.9e-07 57.4 87 44.8
DCAR_029543 Daucus carota HOM05D007785 ORTHO05D008997 1.2e-06 57.0 78 42.3
Aa31LG2G13500 Aethionema arabicum HOM05D010231 ORTHO05D012284 1.5e-06 56.6 73 45.2
Oeu021958.1 Olea europaea HOM05D007785 ORTHO05D008997 1.5e-06 56.6 79 46.8
TPR.G28662 Trifolium pratense HOM05D007785 ORTHO05D008997 1.5e-06 56.6 82 45.1
Gohir.A09G198400 Gossypium hirsutum HOM05D012518 ORTHO05D008997 2.0e-06 56.2 87 44.8
MD02G1229100 Malus domestica HOM05D007785 ORTHO05D008997 2.0e-06 56.2 79 44.3
BolC5t31918H Brassica oleracea HOM05D010231 ORTHO05D012284 2.6e-06 55.8 67 47.8
Sp1g28440 Schrenkiella parvula HOM05D010231 ORTHO05D012284 3.4e-06 55.5 76 47.4
THA.LOC104807966 Tarenaya hassleriana HOM05D010231 ORTHO05D012284 3.4e-06 55.5 74 45.9
A09p33730 Brassica napus HOM05D010231 ORTHO05D012284 4.4e-06 55.1 85 43.5
Phvul.003G229200 Phaseolus vulgaris HOM05D007785 ORTHO05D008997 4.4e-06 55.1 72 51.4
BraA09t38922Z Brassica rapa HOM05D010231 ORTHO05D012284 7.5e-06 54.3 75 45.3
DCAR_025013 Daucus carota HOM05D007785 ORTHO05D008997 9.8e-06 53.9 78 41.0
FvH4_7g07910 Fragaria vesca HOM05D007785 ORTHO05D008997 9.8e-06 53.9 84 46.4
FAN06G1471 Fragaria x ananassa HOM05D007785 ORTHO05D008997 9.8e-06 53.9 84 46.4
FAN10G3075 Fragaria x ananassa HOM05D007785 ORTHO05D008997 9.8e-06 53.9 84 46.4
HanXRQChr16g0519261 Helianthus annuus HOM05D007785 ORTHO05D008997 9.8e-06 53.9 75 44.0


User provided reference genes

Program Settings