Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02463 Aquilegia oxysepala HOM05D006861 ORTHO05D008620 2.5e-119 432.2 227 100.0
TAR629G3318 Trochodendron aralioides HOM05D006861 ORTHO05D008620 3.3e-87 325.5 233 73.8
GSVIVG01013176001 Vitis vinifera HOM05D006861 ORTHO05D008620 4.5e-84 315.1 212 72.2
Manes.17G013800 Manihot esculenta HOM05D006861 ORTHO05D008620 3.2e-82 308.9 211 72.5
Dinv28930 Davidia involucrata HOM05D006861 ORTHO05D008620 1.6e-81 306.6 211 70.6
Potri.003G089400 Populus trichocarpa HOM05D006861 ORTHO05D008620 1.6e-81 306.6 210 71.9
Thecc.03G231500 Theobroma cacao HOM05D006861 ORTHO05D008620 1.6e-81 306.6 210 71.4
FvH4_5g21620 Fragaria vesca HOM05D006861 ORTHO05D008620 6.0e-81 304.7 212 70.3
PSO782G3300 Papaver somniferum HOM05D006861 ORTHO05D008620 6.0e-81 304.7 211 73.0
CiPaw.11G090800 Carya illinoinensis HOM05D006861 ORTHO05D008620 1.8e-80 303.1 213 70.0
PSO063G6338 Papaver somniferum HOM05D006861 ORTHO05D008620 1.8e-80 303.1 211 72.5
FAN18G0349 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.9e-80 302.0 209 70.3
QL12p006269 Quercus lobata HOM05D006861 ORTHO05D008620 6.7e-80 301.2 230 66.5
CSS0041220 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 1.1e-79 300.4 212 68.9
Prupe.5G041200 Prunus persica HOM05D006861 ORTHO05D008620 1.5e-79 300.1 212 69.3
AUR62007255 Chenopodium quinoa HOM05D006861 ORTHO05D008620 2.5e-79 299.3 208 70.2
HanXRQChr16g0511531 Helianthus annuus HOM05D006861 ORTHO05D008620 2.5e-79 299.3 211 67.3
CSS0014670 Camellia sinensis var. sinensis HOM05D006861 ORTHO05D008620 3.3e-79 298.9 212 68.4
FAN08G0129 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.3e-79 298.9 212 70.3
Medtr4g098640 Medicago truncatula HOM05D006861 ORTHO05D008620 4.3e-79 298.5 212 70.3
DCAR_008287 Daucus carota HOM05D006861 ORTHO05D008620 5.6e-79 298.1 211 67.3
Cfa012408 Carpinus fangiana HOM05D006861 ORTHO05D008620 1.3e-78 297.0 213 70.4
MD06G1031100 Malus domestica HOM05D006861 ORTHO05D008620 1.3e-78 297.0 211 68.7
Ah.12g054700 Amaranthus hybridus HOM05D006861 ORTHO05D008620 2.1e-78 296.2 213 69.5
Haze_08270 Corylus avellana HOM05D006861 ORTHO05D008620 2.1e-78 296.2 213 70.0
ATR0049G013 Amborella trichopoda HOM05D006861 ORTHO05D008620 6.2e-78 294.7 212 67.5
EL10Ac5g12163 Beta vulgaris HOM05D006861 ORTHO05D008620 1.1e-77 293.9 213 69.0
Duzib068G0493 Durio zibethinus HOM05D006861 ORTHO05D008620 1.1e-77 293.9 210 67.1
RcHm_v2.0_Chr7g0209081 Rosa chinensis HOM05D006861 ORTHO05D008620 1.1e-77 293.9 211 66.4
Sabra03G0059200 Salix brachista HOM05D006861 ORTHO05D008620 1.1e-77 293.9 211 69.2
Actinidia14818 Actinidia chinensis HOM05D006861 ORTHO05D008620 1.8e-77 293.1 228 64.0
CANSAT21G0325 Cannabis sativa HOM05D006861 ORTHO05D008620 2.4e-77 292.7 214 66.8
FAN04G0264 Fragaria x ananassa HOM05D006861 ORTHO05D008620 3.1e-77 292.4 211 68.2
arahy.Tifrunner.gnm1.ann1.A00F14 Arachis hypogaea HOM05D006861 ORTHO05D008620 4.0e-77 292.0 212 67.9
arahy.Tifrunner.gnm1.ann1.P9U8RJ Arachis hypogaea HOM05D006861 ORTHO05D008620 4.0e-77 292.0 212 67.5
Glyma.17G153700 Glycine max HOM05D006861 ORTHO05D008620 4.0e-77 292.0 212 68.4
Lsat_1_v5_gn_8_112001 Lactuca sativa HOM05D006861 ORTHO05D008620 6.9e-77 291.2 226 61.1
FAN13G1018 Fragaria x ananassa HOM05D006861 ORTHO05D008620 1.2e-76 290.4 220 66.8
Eucgr.D02180 Eucalyptus grandis HOM05D006861 ORTHO05D008620 2.0e-76 289.7 212 68.9
Nn6g33632 Nelumbo nucifera HOM05D006861 ORTHO05D008620 2.6e-76 289.3 268 60.1
Rhsim07G0124500 Rhododendron simsii HOM05D006861 ORTHO05D008620 2.6e-76 289.3 212 66.0
TPR.G28655 Trifolium pratense HOM05D006861 ORTHO05D008620 2.6e-76 289.3 212 67.9
Hma1.2p1_0585F.1_g183570 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 4.5e-76 288.5 212 66.0
Lj4g0014575 Lotus japonicus HOM05D006861 ORTHO05D008620 4.5e-76 288.5 212 67.5
Duzib205G0961 Durio zibethinus HOM05D006861 ORTHO05D008620 7.6e-76 287.7 212 67.5
Lalb_Chr09g0329521 Lupinus albus HOM05D006861 ORTHO05D008620 7.6e-76 287.7 212 66.5
Gohir.A12G209800 Gossypium hirsutum HOM05D006861 ORTHO05D008620 1.0e-75 287.3 212 67.0
THA.LOC104807964 Tarenaya hassleriana HOM05D006861 ORTHO05D008620 1.3e-75 287.0 212 66.0
Ca_22062_v3 Cicer arietinum L. HOM05D006861 ORTHO05D008620 1.7e-75 286.6 211 67.8
Glyma.05G113600 Glycine max HOM05D006861 ORTHO05D008620 2.2e-75 286.2 212 67.9
Sc07g0008780 Simmondsia chinensis HOM05D006861 ORTHO05D008620 2.9e-75 285.8 212 64.2
Gohir.D12G212500 Gossypium hirsutum HOM05D006861 ORTHO05D008620 4.9e-75 285.0 211 66.8
Gorai.003G180500 Gossypium raimondii HOM05D006861 ORTHO05D008620 6.5e-75 284.6 212 67.0
VMungo0251G0361 Vigna mungo HOM05D006861 ORTHO05D008620 6.5e-75 284.6 211 66.8
Psat4g079280 Pisum sativum HOM05D006861 ORTHO05D008620 1.1e-74 283.9 212 67.0
QL12p006401 Quercus lobata HOM05D006861 ORTHO05D008620 1.4e-74 283.5 185 74.6
MELO3C013865.2 Cucumis melo HOM05D006861 ORTHO05D008620 1.9e-74 283.1 211 64.9
Gohir.D03G170200 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.5e-74 282.7 212 66.5
CsaV3_3G001910 Cucumis sativus L. HOM05D006861 ORTHO05D008620 4.2e-74 282.0 211 64.5
ClCG10G001830 Citrullus lanatus HOM05D006861 ORTHO05D008620 1.2e-73 280.4 211 64.9
Ciclev10032685m.g Citrus clementina HOM05D006861 ORTHO05D008620 1.6e-73 280.0 218 66.5
COL.COLO4_17076 Corchorus olitorius HOM05D006861 ORTHO05D008620 4.6e-73 278.5 211 64.9
Aa31LG9G15370 Aethionema arabicum HOM05D006861 ORTHO05D008620 6.0e-73 278.1 211 66.4
Cc08_g02400 Coffea canephora HOM05D006861 ORTHO05D008620 1.0e-72 277.3 210 64.8
ECA233G2855 Erigeron canadensis HOM05D006861 ORTHO05D008620 1.3e-72 276.9 226 59.3
Carub.0004s1705 Capsella rubella HOM05D006861 ORTHO05D008620 2.3e-72 276.2 211 64.9
Gohir.A03G002100 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.3e-72 276.2 212 65.6
HPP92_027725 Vanilla planifolia HOM05D006861 ORTHO05D008620 2.3e-72 276.2 213 65.7
AT2G35360 Arabidopsis thaliana HOM05D006861 ORTHO05D008620 3.0e-72 275.8 211 64.9
HPP92_028475 Vanilla planifolia HOM05D006861 ORTHO05D008620 3.0e-72 275.8 213 65.3
SalBow6G5529 Salvia bowleyana HOM05D006861 ORTHO05D008620 3.9e-72 275.4 211 61.6
SGA_v2.0_scaffold198G41105 Striga asiatica HOM05D006861 ORTHO05D008620 3.9e-72 275.4 211 61.1
Gorai.008G228100 Gossypium raimondii HOM05D006861 ORTHO05D008620 5.1e-72 275.0 223 63.2
Migut.A01006 Erythranthe guttata HOM05D006861 ORTHO05D008620 6.7e-72 274.6 212 63.2
MSTRG.12154 Avicennia marina HOM05D006861 ORTHO05D008620 8.7e-72 274.2 212 62.3
Sed0027053 Sechium edule HOM05D006861 ORTHO05D008620 4.3e-71 271.9 211 63.5
Sp4g17580 Schrenkiella parvula HOM05D006861 ORTHO05D008620 7.4e-71 271.2 211 64.5
Nitab4.5_0000535g0140 Nicotiana tabacum HOM05D006861 ORTHO05D008620 9.6e-71 270.8 211 62.1
Nitab4.5_0007026g0050 Nicotiana tabacum HOM05D006861 ORTHO05D008620 8.2e-70 267.7 216 60.2
vmacro14159 Vaccinium macrocarpon HOM05D006861 ORTHO05D008620 1.4e-69 266.9 207 64.3
AL4G31410 Arabidopsis lyrata HOM05D006861 ORTHO05D008620 1.8e-69 266.5 212 63.2
A05p10410 Brassica napus HOM05D006861 ORTHO05D008620 1.8e-69 266.5 211 61.1
PGSC0003DMG400020500 Solanum tuberosum HOM05D006861 ORTHO05D008620 3.1e-69 265.8 211 62.1
Thhalv10017211m.g Eutrema salsugineum HOM05D006861 ORTHO05D008620 1.5e-68 263.5 211 62.6
BcaB02g09437 Brassica carinata HOM05D006861 ORTHO05D008620 2.0e-68 263.1 211 62.1
BraA05t19976Z Brassica rapa HOM05D006861 ORTHO05D008620 3.4e-68 262.3 211 61.6
CAN.G845.34 Capsicum annuum HOM05D006861 ORTHO05D008620 3.4e-68 262.3 211 60.7
BcaC02g11640 Brassica carinata HOM05D006861 ORTHO05D008620 4.5e-68 261.9 211 61.6
C04p12840 Brassica napus HOM05D006861 ORTHO05D008620 4.5e-68 261.9 211 61.6
BolC4t22928H Brassica oleracea HOM05D006861 ORTHO05D008620 4.5e-68 261.9 211 61.6
CARHR129520 Cardamine hirsuta HOM05D006861 ORTHO05D008620 7.6e-68 261.2 211 61.6
Solyc08g007030.3 Solanum lycopersicum HOM05D006861 ORTHO05D008620 1.3e-67 260.4 211 60.7
Peaxi162Scf00102g00630 Petunia axillaris HOM05D006861 ORTHO05D008620 1.7e-67 260.0 211 61.1
AUR62018744 Chenopodium quinoa HOM05D006861 ORTHO05D008620 1.4e-66 256.9 211 63.5
TWI60G1564 Tripterygium wilfordii HOM05D006861 ORTHO05D008620 1.9e-66 256.5 211 62.1
Sopen08g002990 Solanum pennellii HOM05D006861 ORTHO05D008620 2.5e-66 256.1 211 59.7
Zm00001eb307090 Zea mays HOM05D006861 ORTHO05D008620 2.1e-65 253.1 215 56.7
CDE12G0071 Ceratophyllum demersum HOM05D006861 ORTHO05D008620 3.0e-64 249.2 191 63.4
Os09g0573100 Oryza sativa ssp. japonica HOM05D006861 ORTHO05D008620 9.7e-63 244.2 214 57.0
SEGI_11276 Sequoiadendron giganteum HOM05D006861 ORTHO05D008620 1.5e-60 236.9 209 55.0
Phvul.003G229300 Phaseolus vulgaris HOM05D006861 ORTHO05D008620 6.5e-59 231.5 157 68.8
Lj2A243G18 Lonicera japonica HOM05D006861 ORTHO05D008620 1.2e-57 227.3 144 71.5
Dinv25198 Davidia involucrata HOM05D006861 ORTHO05D008620 1.6e-57 226.9 143 76.9
Hma1.2p1_0585F.1_g183580 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.1e-57 226.5 211 56.4
Cpa.g.sc90.59 Carica papaya HOM05D006861 ORTHO05D008620 1.4e-53 213.8 145 69.7
Actinidia09224 Actinidia chinensis HOM05D006861 ORTHO05D008620 5.3e-53 211.8 139 72.7
Pp3c1_27050 Physcomitrium patens HOM05D006861 ORTHO05D008620 1.2e-52 210.7 213 50.2
Gohir.A09G039700 Gossypium hirsutum HOM05D006861 ORTHO05D008620 5.0e-51 205.3 145 69.0
Hma1.2p1_2232F.1_g317620 Hydrangea macrophylla HOM05D006861 ORTHO05D008620 2.0e-44 183.3 211 47.9
HanXRQChr16g0517491 Helianthus annuus HOM05D006861 ORTHO05D008620 6.1e-41 171.8 124 64.5
Atru.BG.44.p Acer truncatum HOM05D006861 ORTHO05D008620 1.3e-38 164.1 115 66.1
CBR_g57857 Chara braunii HOM05D006861 ORTHO05D008620 4.0e-32 142.5 191 43.5
Cre12.g533400 Chlamydomonas reinhardtii HOM05D006861 ORTHO05D008620 1.3e-14 84.3 223 29.6
PRCOL_00000188 Prasinoderma coloniale HOM05D006861 ORTHO05D008620 2.4e-13 80.1 137 35.0
Gohir.A01G114301 Gossypium hirsutum HOM05D006861 ORTHO05D008620 2.3e-08 63.5 55 60.0
MCO13G047 Micromonas commoda HOM05D006861 ORTHO05D008620 6.8e-08 62.0 209 28.2


User provided reference genes

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