Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02453 Aquilegia oxysepala HOM05D007142 ORTHO05D008983 7.3e-135 483.8 229 100.0
TAR629G1364 Trochodendron aralioides HOM05D007142 ORTHO05D008983 4.2e-114 414.8 231 86.1
GSVIVG01013184001 Vitis vinifera HOM05D007142 ORTHO05D008983 1.8e-109 399.4 228 82.5
VMungo0251G3176 Vigna mungo HOM05D007142 ORTHO05D008983 1.5e-108 396.4 226 83.2
COL.COLO4_17070 Corchorus olitorius HOM05D007142 ORTHO05D008983 2.2e-107 392.5 234 80.8
Phvul.003G229700 Phaseolus vulgaris HOM05D007142 ORTHO05D008983 2.9e-107 392.1 226 82.3
Glyma.17G154151 Glycine max HOM05D007142 ORTHO05D008983 1.4e-106 389.8 226 83.2
Actinidia25952 Actinidia chinensis HOM05D007142 ORTHO05D008983 1.9e-106 389.4 228 81.6
Dinv28934 Davidia involucrata HOM05D007142 ORTHO05D008983 1.9e-106 389.4 232 79.3
Potri.003G089900 Populus trichocarpa HOM05D007142 ORTHO05D008983 1.9e-106 389.4 231 80.1
Thecc.03G230800 Theobroma cacao HOM05D007142 ORTHO05D008983 1.9e-106 389.4 233 79.8
Gohir.D08G178400 Gossypium hirsutum HOM05D007142 ORTHO05D008983 3.2e-106 388.7 220 83.6
DCAR_032211 Daucus carota HOM05D007142 ORTHO05D008983 5.5e-106 387.9 233 80.3
Atru.chr6.1752 Acer truncatum HOM05D007142 ORTHO05D008983 9.3e-106 387.1 230 78.3
Gorai.004G186600 Gossypium raimondii HOM05D007142 ORTHO05D008983 1.2e-105 386.7 220 83.2
TPR.G28665 Trifolium pratense HOM05D007142 ORTHO05D008983 2.7e-105 385.6 230 80.0
Medtr4g098620 Medicago truncatula HOM05D007142 ORTHO05D008983 3.5e-105 385.2 231 80.5
Duzib205G0350 Durio zibethinus HOM05D007142 ORTHO05D008983 4.6e-105 384.8 234 78.6
PSO384G0274 Papaver somniferum HOM05D007142 ORTHO05D008983 6.0e-105 384.4 241 78.4
Psat4g079200 Pisum sativum HOM05D007142 ORTHO05D008983 1.0e-104 383.6 232 79.7
PGR031G3753 Punica granatum HOM05D007142 ORTHO05D008983 2.3e-104 382.5 213 84.0
FAN08G2513 Fragaria x ananassa HOM05D007142 ORTHO05D008983 3.0e-104 382.1 236 78.4
RcHm_v2.0_Chr7g0209181 Rosa chinensis HOM05D007142 ORTHO05D008983 3.0e-104 382.1 236 78.4
CiPaw.11G091400 Carya illinoinensis HOM05D007142 ORTHO05D008983 3.9e-104 381.7 228 78.9
MD06G1031800 Malus domestica HOM05D007142 ORTHO05D008983 5.1e-104 381.3 234 79.9
Lsat_1_v5_gn_3_16621 Lactuca sativa HOM05D007142 ORTHO05D008983 8.7e-104 380.6 216 83.3
Eucgr.D02183 Eucalyptus grandis HOM05D007142 ORTHO05D008983 1.1e-103 380.2 230 79.1
Cc08_g02450 Coffea canephora HOM05D007142 ORTHO05D000161 1.5e-103 379.8 234 77.4
FvH4_5g21680 Fragaria vesca HOM05D007142 ORTHO05D008983 1.5e-103 379.8 223 80.7
Haze_08264 Corylus avellana HOM05D007142 ORTHO05D008983 1.9e-103 379.4 229 78.6
FAN18G0559 Fragaria x ananassa HOM05D007142 ORTHO05D008983 3.3e-103 378.6 223 81.2
Nitab4.5_0003100g0010 Nicotiana tabacum HOM05D007142 ORTHO05D008983 3.3e-103 378.6 230 78.3
PSO339G0102 Papaver somniferum HOM05D007142 ORTHO05D008983 3.3e-103 378.6 230 80.0
ECA246G1460 Erigeron canadensis HOM05D007142 ORTHO05D008983 4.3e-103 378.3 217 82.9
Prupe.5G040300 Prunus persica HOM05D007142 ORTHO05D008983 5.6e-103 377.9 222 82.9
Ciclev10032530m.g Citrus clementina HOM05D007142 ORTHO05D008983 1.6e-102 376.3 233 78.1
Lj4g0022330 Lotus japonicus HOM05D007142 ORTHO05D008983 1.6e-102 376.3 231 78.8
Manes.17G016003 Manihot esculenta HOM05D007142 ORTHO05D008983 1.6e-102 376.3 219 79.9
Nitab4.5_0014378g0020 Nicotiana tabacum HOM05D007142 ORTHO05D008983 1.6e-102 376.3 231 77.5
Cpa.g.sc665.3 Carica papaya HOM05D007142 ORTHO05D008983 2.8e-102 375.6 220 79.5
QL12p006204 Quercus lobata HOM05D007142 ORTHO05D008983 4.8e-102 374.8 227 77.1
Sopen06g021290 Solanum pennellii HOM05D007142 ORTHO05D008983 4.8e-102 374.8 216 82.9
Solyc06g061090.3 Solanum lycopersicum HOM05D007142 ORTHO05D008983 6.2e-102 374.4 216 82.4
vmacro00342 Vaccinium macrocarpon HOM05D007142 ORTHO05D008983 6.2e-102 374.4 214 82.7
CDE11G1210 Ceratophyllum demersum HOM05D007142 ORTHO05D008983 1.1e-101 373.6 232 76.3
arahy.Tifrunner.gnm1.ann1.J3YA34 Arachis hypogaea HOM05D007142 ORTHO05D008983 1.8e-101 372.9 233 76.0
CAN.G201.17 Capsicum annuum HOM05D007142 ORTHO05D008983 2.4e-101 372.5 220 80.0
ClCG10G001790 Citrullus lanatus HOM05D007142 ORTHO05D008983 3.1e-101 372.1 230 76.5
TWI15G0113 Tripterygium wilfordii HOM05D007142 ORTHO05D008983 3.1e-101 372.1 220 79.5
ATR0049G055 Amborella trichopoda HOM05D007142 ORTHO05D008983 4.0e-101 371.7 217 81.1
Lalb_Chr09g0329501 Lupinus albus HOM05D007142 ORTHO05D008983 1.2e-100 370.2 211 83.9
Sabra03G0059800 Salix brachista HOM05D007142 ORTHO05D008983 1.5e-100 369.8 253 73.1
CANSAT21G2079 Cannabis sativa HOM05D007142 ORTHO05D008983 3.4e-100 368.6 223 78.9
Ah.12g054590 Amaranthus hybridus HOM05D007142 ORTHO05D008983 4.5e-100 368.2 228 74.6
MELO3C013862.2 Cucumis melo HOM05D007142 ORTHO05D008983 5.8e-100 367.9 216 80.6
HanXRQChr17g0535721 Helianthus annuus HOM05D007142 ORTHO05D008983 7.6e-100 367.5 211 82.0
CsaV3_3G001880 Cucumis sativus L. HOM05D007142 ORTHO05D008983 1.3e-99 366.7 233 76.4
SalBow4G2536 Salvia bowleyana HOM05D007142 ORTHO05D008983 1.7e-99 366.3 231 77.1
Migut.F01892 Erythranthe guttata HOM05D007142 ORTHO05D008983 6.5e-99 364.4 220 80.5
SGA_v2.0_scaffold4519G54498 Striga asiatica HOM05D007142 ORTHO05D008983 8.4e-99 364.0 223 78.5
EL10Ac5g12171 Beta vulgaris HOM05D007142 ORTHO05D008983 1.1e-98 363.6 228 73.7
Aa31LG2G13430 Aethionema arabicum HOM05D007142 ORTHO05D008983 3.5e-97 358.6 223 77.6
AUR62018753 Chenopodium quinoa HOM05D007142 ORTHO05D008983 2.3e-96 355.9 229 73.8
Sed0005643 Sechium edule HOM05D007142 ORTHO05D008983 2.3e-96 355.9 212 81.1
BcaB07g32947 Brassica carinata HOM05D007142 ORTHO05D008983 3.0e-96 355.5 231 74.0
A09p33690 Brassica napus HOM05D007142 ORTHO05D008983 3.0e-96 355.5 222 77.0
C05p31960 Brassica napus HOM05D007142 ORTHO05D008983 1.1e-95 353.6 222 76.6
BolC5t31922H Brassica oleracea HOM05D007142 ORTHO05D008983 1.1e-95 353.6 222 76.6
BraA09t38918Z Brassica rapa HOM05D007142 ORTHO05D008983 1.9e-95 352.8 222 76.6
BcaC05g27290 Brassica carinata HOM05D007142 ORTHO05D008983 3.3e-95 352.1 222 76.1
Thhalv10008641m.g Eutrema salsugineum HOM05D007142 ORTHO05D008983 4.3e-95 351.7 222 76.1
MSTRG.9125 Avicennia marina HOM05D007142 ORTHO05D008983 5.7e-95 351.3 231 73.6
CARHR031970 Cardamine hirsuta HOM05D007142 ORTHO05D008983 9.7e-95 350.5 233 73.0
AT1G32520 Arabidopsis thaliana HOM05D007142 ORTHO05D008983 1.3e-94 350.1 221 75.6
AL1G46770 Arabidopsis lyrata HOM05D007142 ORTHO05D008983 2.8e-94 349.0 221 76.5
THA.LOC104807961 Tarenaya hassleriana HOM05D007142 ORTHO05D008983 1.8e-93 346.3 232 72.8
Sc10g0005600 Simmondsia chinensis HOM05D007142 ORTHO05D008983 6.9e-93 344.4 215 75.8
HPP92_004467 Vanilla planifolia HOM05D007142 ORTHO05D008983 9.0e-93 344.0 225 72.0
Carub.0001s3093 Capsella rubella HOM05D007142 ORTHO05D008983 1.5e-92 343.2 221 73.8
HPP92_004488 Vanilla planifolia HOM05D007142 ORTHO05D008983 1.0e-91 340.5 225 71.6
Peaxi162Scf00603g00413 Petunia axillaris HOM05D007142 ORTHO05D008983 2.9e-91 339.0 218 75.7
FAN04G2755 Fragaria x ananassa HOM05D007142 ORTHO05D008983 1.9e-90 336.3 237 72.2
Nn6g33627 Nelumbo nucifera HOM05D007142 ORTHO05D008983 4.6e-89 331.6 174 89.1
PGSC0003DMG400002104 Solanum tuberosum HOM05D007142 ORTHO05D008983 6.7e-88 327.8 195 80.5
Rhsim11G0012900 Rhododendron simsii HOM05D007142 ORTHO05D008983 2.5e-87 325.9 185 84.3
AUR62007246 Chenopodium quinoa HOM05D007142 ORTHO05D008983 3.7e-86 322.0 204 75.0
Lj2C242T12 Lonicera japonica HOM05D007142 ORTHO05D008983 6.3e-86 321.2 174 85.6
Zm00001eb090700 Zea mays HOM05D007142 ORTHO05D008983 4.1e-85 318.5 217 68.7
Sp1g28380 Schrenkiella parvula HOM05D007142 ORTHO05D008983 1.2e-84 317.0 210 72.9
FAN13G1057 Fragaria x ananassa HOM05D007142 ORTHO05D008983 6.5e-83 311.2 197 76.6
Mapoly0005s0008 Marchantia polymorpha HOM05D007142 ORTHO05D008983 1.2e-81 307.0 214 67.3
MBI04_g22954_MAGBIO Magnolia biondii HOM05D007142 ORTHO05D008983 2.7e-81 305.8 171 84.8
unitig_32.g11901 Utricularia gibba HOM05D007142 ORTHO05D008983 6.7e-80 301.2 224 67.9
arahy.Tifrunner.gnm1.ann1.KYR2NU Arachis hypogaea HOM05D007142 ORTHO05D008983 9.7e-79 297.4 230 65.7
AagrBONN_evm.TU.Sc2ySwM_362.655 Anthoceros agrestis HOM05D007142 ORTHO05D008983 3.1e-77 292.4 209 69.4
SEGI_34411 Sequoiadendron giganteum HOM05D007142 ORTHO05D008983 5.9e-76 288.1 197 69.5
Gohir.A08G158100 Gossypium hirsutum HOM05D007142 ORTHO05D008983 2.8e-70 269.2 164 76.8
Os11g0220300 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 1.1e-45 187.6 141 63.1
SMO367G0110 Selaginella moellendorffii HOM05D007142 ORTHO05D008983 4.1e-45 185.7 127 69.3
PRCOL_00005169 Prasinoderma coloniale HOM05D007142 ORTHO05D008983 8.0e-41 171.4 191 48.7
MCO11G179 Micromonas commoda HOM05D007142 ORTHO05D008983 7.8e-28 128.3 189 40.2
Os07g0120051 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 1.3e-27 127.5 119 57.1
Hma1.2p1_0585F.1_g183620 Hydrangea macrophylla HOM05D007142 ORTHO05D008983 3.4e-23 112.8 62 87.1
Oeu029960.1 Olea europaea HOM05D007142 ORTHO05D008983 9.9e-23 111.3 62 87.1
Glyma.05G112900 Glycine max HOM05D007142 ORTHO05D008983 8.3e-22 108.2 189 39.7
Dinv25200 Davidia involucrata HOM05D007142 ORTHO05D008983 2.1e-20 103.6 151 42.4
Aqoxy108s002 Aquilegia oxysepala HOM05D000527 ORTHO05D017379 9.3e-13 78.2 60 75.0
Aqoxy3G01065 Aquilegia oxysepala HOM05D000527 ORTHO05D000559 9.3e-13 78.2 60 75.0
MCO05G635 Micromonas commoda HOM05D007142 ORTHO05D008983 9.3e-13 78.2 174 29.9
Os11g0275900 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 1.4e-08 64.3 43 72.1
Os06g0318400 Oryza sativa ssp. japonica HOM05D007142 ORTHO05D008983 4.0e-08 62.8 54 50.0


User provided reference genes

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