Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02451 Aquilegia oxysepala HOM05D001339 ORTHO05D003609 3.5e-42 174.5 84 100.0
Aqoxy1G00060 Aquilegia oxysepala HOM05D001339 ORTHO05D003609 4.3e-16 87.8 72 62.5
Sed0002329 Sechium edule HOM05D001339 ORTHO05D003609 8.9e-14 80.1 53 71.7
TAR622G0423 Trochodendron aralioides HOM05D001339 ORTHO05D003609 7.6e-13 77.0 61 63.9
SalBow6G3871 Salvia bowleyana HOM05D001339 ORTHO05D003609 9.9e-13 76.6 53 67.9
Actinidia34517 Actinidia chinensis HOM05D001339 ORTHO05D003609 1.7e-12 75.9 53 66.0
MSTRG.12727 Avicennia marina HOM05D001339 ORTHO05D003609 1.7e-12 75.9 53 67.9
Nn3g17513 Nelumbo nucifera HOM05D001339 ORTHO05D003609 2.2e-12 75.5 61 62.3
QL10p043911 Quercus lobata HOM05D001339 ORTHO05D003609 2.2e-12 75.5 71 53.5
Migut.N00696 Erythranthe guttata HOM05D001339 ORTHO05D003609 2.9e-12 75.1 53 66.0
MD13G1277300 Malus domestica HOM05D001339 ORTHO05D003609 2.9e-12 75.1 53 64.2
MSTRG.21286 Avicennia marina HOM05D001339 ORTHO05D003609 3.8e-12 74.7 53 66.0
Dinv28769 Davidia involucrata HOM05D001339 ORTHO05D003609 3.8e-12 74.7 53 66.0
Duzib248G1082 Durio zibethinus HOM05D001339 ORTHO05D003609 4.9e-12 74.3 53 67.9
Duzib132G0334 Durio zibethinus HOM05D001339 ORTHO05D003609 6.4e-12 73.9 53 67.9
Sed0005194 Sechium edule HOM05D001339 ORTHO05D003609 6.4e-12 73.9 53 66.0
CSS0040771 Camellia sinensis var. sinensis HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 64.2
ClCG07G016660 Citrullus lanatus HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 64.2
MELO3C017676.2 Cucumis melo HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 64.2
CsaV3_4G003790 Cucumis sativus L. HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 64.2
Gohir.D01G013300 Gossypium hirsutum HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 67.9
Gorai.002G015100 Gossypium raimondii HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 67.9
Prupe.1G350100 Prunus persica HOM05D001339 ORTHO05D003609 8.4e-12 73.6 53 66.0
MSTRG.17941 Avicennia marina HOM05D001339 ORTHO05D003609 1.1e-11 73.2 53 66.0
Ciclev10032173m.g Citrus clementina HOM05D001339 ORTHO05D003609 1.1e-11 73.2 71 52.1
MD04G1030900 Malus domestica HOM05D001339 ORTHO05D003609 1.1e-11 73.2 53 62.3
Oeu023909.2 Olea europaea HOM05D001339 ORTHO05D003609 1.1e-11 73.2 53 66.0
Prupe.1G180200 Prunus persica HOM05D001339 ORTHO05D003609 1.1e-11 73.2 53 62.3
Rhsim13G0056400 Rhododendron simsii HOM05D001339 ORTHO05D003609 1.1e-11 73.2 53 64.2
Actinidia11646 Actinidia chinensis HOM05D001339 ORTHO05D003609 1.4e-11 72.8 53 62.3
Nn4g23504 Nelumbo nucifera HOM05D001339 ORTHO05D003609 1.4e-11 72.8 61 60.7
TAR629G2379 Trochodendron aralioides HOM05D001339 ORTHO05D003609 1.4e-11 72.8 53 64.2
arahy.Tifrunner.gnm1.ann1.78WJBV Arachis hypogaea HOM05D001339 ORTHO05D003609 1.9e-11 72.4 71 50.7
Dinv18270 Davidia involucrata HOM05D001339 ORTHO05D003609 1.9e-11 72.4 53 62.3
Duzib052G0423 Durio zibethinus HOM05D001339 ORTHO05D003609 1.9e-11 72.4 53 67.9
Haze_11068 Corylus avellana HOM05D001339 ORTHO05D003609 2.4e-11 72.0 53 64.2
Gohir.A01G012100 Gossypium hirsutum HOM05D001339 ORTHO05D003609 2.4e-11 72.0 53 66.0
Oeu020447.1 Olea europaea HOM05D001339 ORTHO05D003609 2.4e-11 72.0 53 62.3
CANSAT78G0076 Cannabis sativa HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
CiPaw.01G107500 Carya illinoinensis HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 62.3
COL.COLO4_33124 Corchorus olitorius HOM05D001339 ORTHO05D003609 3.2e-11 71.6 71 53.5
Gohir.A04G109448 Gossypium hirsutum HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
Gohir.D04G149200 Gossypium hirsutum HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
Gorai.012G135700 Gossypium raimondii HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
Manes.04G162300 Manihot esculenta HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
Manes.11G000900 Manihot esculenta HOM05D001339 ORTHO05D003609 3.2e-11 71.6 53 64.2
SHI21181 Sapria himalayana HOM05D001339 ORTHO05D003609 3.2e-11 71.6 61 59.0
CiPaw.02G058400 Carya illinoinensis HOM05D001339 ORTHO05D003609 4.1e-11 71.2 53 60.4
Thecc.02G153700 Theobroma cacao HOM05D001339 ORTHO05D003609 4.1e-11 71.2 53 64.2
unitig_26.g10230 Utricularia gibba HOM05D001339 ORTHO05D003609 4.1e-11 71.2 61 60.7
CSS0042877 Camellia sinensis var. sinensis HOM05D001339 ORTHO05D003609 5.4e-11 70.9 53 64.2
Cpa.g.sc247.4 Carica papaya HOM05D001339 ORTHO05D003609 5.4e-11 70.9 53 64.2
Migut.D00781 Erythranthe guttata HOM05D001339 ORTHO05D003609 5.4e-11 70.9 54 61.1
RcHm_v2.0_Chr4g0409321 Rosa chinensis HOM05D001339 ORTHO05D003609 5.4e-11 70.9 61 59.0
vmacro14663 Vaccinium macrocarpon HOM05D001339 ORTHO05D003609 5.4e-11 70.9 53 62.3
Actinidia23141 Actinidia chinensis HOM05D001339 ORTHO05D003609 7.1e-11 70.5 53 60.4
FAN07G0891 Fragaria x ananassa HOM05D001339 ORTHO05D003609 7.1e-11 70.5 61 59.0
Rhsim01G0245800 Rhododendron simsii HOM05D001339 ORTHO05D003609 7.1e-11 70.5 53 60.4
GSVIVG01038525001 Vitis vinifera HOM05D001339 ORTHO05D003609 7.1e-11 70.5 53 62.3
Atru.chr12.1216 Acer truncatum HOM05D001339 ORTHO05D003609 9.2e-11 70.1 71 49.3
DCAR_018597 Daucus carota HOM05D001339 ORTHO05D003609 9.2e-11 70.1 71 49.3
Phvul.002G324200 Phaseolus vulgaris HOM05D001339 ORTHO05D003609 9.2e-11 70.1 71 49.3
TWI53G0842 Tripterygium wilfordii HOM05D001339 ORTHO05D003609 9.2e-11 70.1 61 57.4
FvH4_4g11890 Fragaria vesca HOM05D001339 ORTHO05D003609 1.2e-10 69.7 61 59.0
FAN12G0420 Fragaria x ananassa HOM05D001339 ORTHO05D003609 1.2e-10 69.7 61 59.0
FAN12G3706 Fragaria x ananassa HOM05D001339 ORTHO05D003609 1.2e-10 69.7 61 59.0
FAN17G0976 Fragaria x ananassa HOM05D001339 ORTHO05D003609 1.2e-10 69.7 61 59.0
FAN22G1286 Fragaria x ananassa HOM05D001339 ORTHO05D003609 1.2e-10 69.7 61 59.0
Gohir.D02G190600 Gossypium hirsutum HOM05D001339 ORTHO05D003609 1.2e-10 69.7 53 64.2
Gorai.005G213300 Gossypium raimondii HOM05D001339 ORTHO05D003609 1.2e-10 69.7 53 64.2
Hma1.2p1_1631F.1_g294620 Hydrangea macrophylla HOM05D001339 ORTHO05D003609 1.2e-10 69.7 53 60.4
arahy.Tifrunner.gnm1.ann1.814T0F Arachis hypogaea HOM05D001339 ORTHO05D003609 2.1e-10 68.9 71 49.3
CAN.G181.51 Capsicum annuum HOM05D001339 ORTHO05D003609 2.1e-10 68.9 71 47.9
Gohir.A03G167500 Gossypium hirsutum HOM05D001339 ORTHO05D003609 2.1e-10 68.9 53 64.2
HanXRQChr08g0231021 Helianthus annuus HOM05D001339 ORTHO05D003609 2.1e-10 68.9 53 60.4
Lsat_1_v5_gn_9_15641 Lactuca sativa HOM05D001339 ORTHO05D003609 2.1e-10 68.9 53 60.4
TWI77G0219 Tripterygium wilfordii HOM05D001339 ORTHO05D003609 2.1e-10 68.9 61 55.7
VMungo0251G0670 Vigna mungo HOM05D001339 ORTHO05D003609 2.1e-10 68.9 53 60.4
ECA247G3983 Erigeron canadensis HOM05D001339 ORTHO05D003609 2.7e-10 68.6 53 60.4
HanXRQChr11g0347311 Helianthus annuus HOM05D001339 ORTHO05D003609 2.7e-10 68.6 53 60.4
Hma1.2p1_0161F.1_g071910 Hydrangea macrophylla HOM05D001339 ORTHO05D003609 2.7e-10 68.6 53 60.4
Ca_17248_v3 Cicer arietinum L. HOM05D001339 ORTHO05D003609 3.5e-10 68.2 71 46.5
Lj1C108G11 Lonicera japonica HOM05D001339 ORTHO05D003609 3.5e-10 68.2 48 66.7
Lj2A1108G29 Lonicera japonica HOM05D001339 ORTHO05D003609 3.5e-10 68.2 53 60.4
SEGI_13312 Sequoiadendron giganteum HOM05D001339 ORTHO05D003609 3.5e-10 68.2 61 60.7
Cfa008557 Carpinus fangiana HOM05D001339 ORTHO05D003609 4.6e-10 67.8 53 60.4
Nitab4.5_0000539g0050 Nicotiana tabacum HOM05D001339 ORTHO05D003609 4.6e-10 67.8 53 60.4
Nitab4.5_0004383g0060 Nicotiana tabacum HOM05D001339 ORTHO05D003609 4.6e-10 67.8 53 60.4
Lj4g0016304 Lotus japonicus HOM05D001339 ORTHO05D003609 6.0e-10 67.4 71 45.1
Lalb_Chr16g0387411 Lupinus albus HOM05D001339 ORTHO05D003609 6.0e-10 67.4 53 56.6
Glyma.05G241100 Glycine max HOM05D001339 ORTHO05D003609 7.8e-10 67.0 53 58.5
Glyma.08G048100 Glycine max HOM05D001339 ORTHO05D003609 7.8e-10 67.0 53 58.5
QL01p000742 Quercus lobata HOM05D001339 ORTHO05D003609 7.8e-10 67.0 53 62.3
CAN.G874.54 Capsicum annuum HOM05D001339 ORTHO05D003609 1.0e-09 66.6 71 47.9
Peaxi162Scf00372g00719 Petunia axillaris HOM05D001339 ORTHO05D003609 1.0e-09 66.6 53 58.5
Potri.007G000200 Populus trichocarpa HOM05D001339 ORTHO05D003609 1.0e-09 66.6 53 60.4
Sabra07G0000200 Salix brachista HOM05D001339 ORTHO05D003609 1.0e-09 66.6 53 60.4
Sp3g18030 Schrenkiella parvula HOM05D001339 ORTHO05D003609 1.0e-09 66.6 53 58.5
MBI19_g37616_MAGBIO Magnolia biondii HOM05D001339 ORTHO05D003609 1.3e-09 66.2 61 59.0
Solyc06g082793.1 Solanum lycopersicum HOM05D001339 ORTHO05D003609 1.3e-09 66.2 53 56.6
Sopen06g034150 Solanum pennellii HOM05D001339 ORTHO05D003609 1.3e-09 66.2 53 56.6
Lalb_Chr09g0330751 Lupinus albus HOM05D001339 ORTHO05D003609 1.7e-09 65.9 53 56.6
Sc15g0000900 Simmondsia chinensis HOM05D001339 ORTHO05D003609 1.7e-09 65.9 61 54.1
Nitab4.5_0002641g0080 Nicotiana tabacum HOM05D001339 ORTHO05D003609 2.3e-09 65.5 53 56.6
Nitab4.5_0003952g0030 Nicotiana tabacum HOM05D001339 ORTHO05D003609 2.3e-09 65.5 53 56.6
Potri.014G004100 Populus trichocarpa HOM05D001339 ORTHO05D003609 2.3e-09 65.5 53 58.5
Sabra14G0001700 Salix brachista HOM05D001339 ORTHO05D003609 2.3e-09 65.5 53 58.5
Sabra14G0004100 Salix brachista HOM05D001339 ORTHO05D003609 2.3e-09 65.5 53 58.5
HPP92_000810 Vanilla planifolia HOM05D001339 ORTHO05D003609 3.0e-09 65.1 53 60.4
Solyc06g007710.4 Solanum lycopersicum HOM05D001339 ORTHO05D003609 3.9e-09 64.7 53 54.7
Sopen06g002600 Solanum pennellii HOM05D001339 ORTHO05D003609 3.9e-09 64.7 53 54.7
THA.LOC104815250 Tarenaya hassleriana HOM05D001339 ORTHO05D003609 3.9e-09 64.7 53 58.5
PSO339G6378 Papaver somniferum HOM05D001339 ORTHO05D003609 5.1e-09 64.3 61 55.7
Zm00001eb015420 Zea mays HOM05D001339 ORTHO05D003609 5.1e-09 64.3 61 55.7
Thhalv10021197m.g Eutrema salsugineum HOM05D001339 ORTHO05D003609 6.6e-09 63.9 53 54.7
Lsat_1_v5_gn_5_175961 Lactuca sativa HOM05D001339 ORTHO05D003609 6.6e-09 63.9 53 54.7
PSO384G4952 Papaver somniferum HOM05D001339 ORTHO05D003609 6.6e-09 63.9 61 54.1
THA.LOC104826511 Tarenaya hassleriana HOM05D001339 ORTHO05D003609 6.6e-09 63.9 53 56.6
Aa31LG8G6780 Aethionema arabicum HOM05D001339 ORTHO05D003609 8.7e-09 63.5 53 56.6
CDE02G2561 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 8.7e-09 63.5 61 57.4
CDE04G2801 Ceratophyllum demersum HOM05D001339 ORTHO05D003609 8.7e-09 63.5 61 57.4
ECA248G3873 Erigeron canadensis HOM05D001339 ORTHO05D003609 8.7e-09 63.5 53 54.7
SGA_v2.0_scaffold77G25332 Striga asiatica HOM05D001339 ORTHO05D003609 8.7e-09 63.5 61 52.5
HPP92_021162 Vanilla planifolia HOM05D001339 ORTHO05D003609 8.7e-09 63.5 61 55.7
Sp1g37220 Schrenkiella parvula HOM05D001339 ORTHO05D003609 1.1e-08 63.2 53 56.6
Sp1g37230 Schrenkiella parvula HOM05D001339 ORTHO05D003609 1.1e-08 63.2 53 58.5
vmacro02853 Vaccinium macrocarpon HOM05D001339 ORTHO05D003609 1.1e-08 63.2 66 50.0
BcaB04g20672 Brassica carinata HOM05D001339 ORTHO05D003609 1.5e-08 62.8 53 56.6
A01p34660 Brassica napus HOM05D001339 ORTHO05D003609 1.5e-08 62.8 53 56.6
Eucgr.J00343 Eucalyptus grandis HOM05D001339 ORTHO05D003609 1.5e-08 62.8 53 58.5
PGR044G2652 Punica granatum HOM05D001339 ORTHO05D003609 1.5e-08 62.8 53 56.6
SGA_v2.0_scaffold120G33015 Striga asiatica HOM05D001339 ORTHO05D003609 1.5e-08 62.8 53 54.7
Thhalv10012035m.g Eutrema salsugineum HOM05D001339 ORTHO05D003609 1.9e-08 62.4 53 56.6
MD13G1002300 Malus domestica HOM05D001339 ORTHO05D003609 1.9e-08 62.4 53 58.5
THA.LOC104809025 Tarenaya hassleriana HOM05D001339 ORTHO05D003609 1.9e-08 62.4 53 56.6
Psat7g004320 Pisum sativum HOM05D001339 ORTHO05D003609 2.5e-08 62.0 53 56.6
Zm00001eb395490 Zea mays HOM05D001339 ORTHO05D003609 2.5e-08 62.0 61 54.1
AT3G20000 Arabidopsis thaliana HOM05D001339 ORTHO05D003609 3.3e-08 61.6 53 56.6
BcaC09g48956 Brassica carinata HOM05D001339 ORTHO05D003609 3.3e-08 61.6 53 54.7
C01p44090 Brassica napus HOM05D001339 ORTHO05D003609 3.3e-08 61.6 53 54.7
BolC1t04372H Brassica oleracea HOM05D001339 ORTHO05D003609 3.3e-08 61.6 53 54.7
Mapoly0037s0137 Marchantia polymorpha HOM05D001339 ORTHO05D003609 3.3e-08 61.6 53 56.6
BcaC01g03591 Brassica carinata HOM05D001339 ORTHO05D003609 4.3e-08 61.2 53 54.7
Cc01_g15660 Coffea canephora HOM05D001339 ORTHO05D003609 5.6e-08 60.8 53 54.7
RcHm_v2.0_Chr4g0447041 Rosa chinensis HOM05D001339 ORTHO05D003609 5.6e-08 60.8 53 54.7
Hund05689 Selenicereus undatus HOM05D001339 ORTHO05D003609 5.6e-08 60.8 53 58.5
Hund18623 Selenicereus undatus HOM05D001339 ORTHO05D003609 5.6e-08 60.8 53 56.6
Aa31LG10G3890 Aethionema arabicum HOM05D001339 ORTHO05D003609 7.3e-08 60.5 71 46.5
C03p50840 Brassica napus HOM05D001339 ORTHO05D003609 7.3e-08 60.5 71 45.1
BolC3t17368H Brassica oleracea HOM05D001339 ORTHO05D003609 7.3e-08 60.5 71 45.1
CARHR095530 Cardamine hirsuta HOM05D001339 ORTHO05D003609 7.3e-08 60.5 53 52.8
AUR62001375 Chenopodium quinoa HOM05D001339 ORTHO05D003609 7.3e-08 60.5 61 52.5
AUR62025591 Chenopodium quinoa HOM05D001339 ORTHO05D003609 7.3e-08 60.5 61 52.5
Peaxi162Scf00293g00041 Petunia axillaris HOM05D001339 ORTHO05D003609 7.3e-08 60.5 48 58.3
TPR.G19258 Trifolium pratense HOM05D001339 ORTHO05D003609 7.3e-08 60.5 53 54.7
Carub.0003s1990 Capsella rubella HOM05D001339 ORTHO05D003609 9.6e-08 60.1 53 52.8
Medtr8g106010 Medicago truncatula HOM05D001339 ORTHO05D003609 9.6e-08 60.1 53 52.8
Medtr8g106050 Medicago truncatula HOM05D001339 ORTHO05D003609 9.6e-08 60.1 53 52.8
Os03g0323800 Oryza sativa ssp. japonica HOM05D001339 ORTHO05D003609 1.2e-07 59.7 53 54.7
BcaB06g26069 Brassica carinata HOM05D001339 ORTHO05D003609 1.6e-07 59.3 53 54.7
AL3G33650 Arabidopsis lyrata HOM05D001339 ORTHO05D003609 2.1e-07 58.9 53 52.8
HanXRQChr01g0013691 Helianthus annuus HOM05D001339 ORTHO05D003609 2.1e-07 58.9 71 43.7
Nn1g02868 Nelumbo nucifera HOM05D001339 ORTHO05D003609 2.1e-07 58.9 51 54.9
A03p41520 Brassica napus HOM05D001339 ORTHO05D003609 2.8e-07 58.5 53 52.8
BraA03t13306Z Brassica rapa HOM05D001339 ORTHO05D003609 2.8e-07 58.5 53 52.8
AagrBONN_evm.TU.Sc2ySwM_362.1809 Anthoceros agrestis HOM05D001339 ORTHO05D003609 3.6e-07 58.2 53 52.8
AL1G58040 Arabidopsis lyrata HOM05D001339 ORTHO05D003609 6.2e-07 57.4 52 53.8
EL10Ac7g18232 Beta vulgaris HOM05D001339 ORTHO05D003609 6.2e-07 57.4 61 49.2
Ah.08g217550 Amaranthus hybridus HOM05D001339 ORTHO05D003609 8.1e-07 57.0 71 43.7
CARHR040410 Cardamine hirsuta HOM05D001339 ORTHO05D003609 8.1e-07 57.0 54 53.7
Lsat_1_v5_gn_3_100001 Lactuca sativa HOM05D002100 ORTHO05D003609 8.1e-07 57.0 52 51.9
SMO367G0551 Selaginella moellendorffii HOM05D001339 ORTHO05D003609 8.1e-07 57.0 52 51.9
MBI13_g00576_MAGBIO Magnolia biondii HOM05D001339 ORTHO05D003609 1.1e-06 56.6 79 45.6
arahy.Tifrunner.gnm1.ann1.8K57QZ Arachis hypogaea HOM05D001339 ORTHO05D008981 1.4e-06 56.2 49 55.1
Pp3c22_19420 Physcomitrium patens HOM05D001339 ORTHO05D003609 1.4e-06 56.2 55 47.3
arahy.Tifrunner.gnm1.ann1.3FZ8N2 Arachis hypogaea HOM05D001339 ORTHO05D003609 1.8e-06 55.8 48 54.2
Haze_17409 Corylus avellana HOM05D001339 ORTHO05D003609 1.8e-06 55.8 48 56.2
BcaC05g28374 Brassica carinata HOM05D001339 ORTHO05D003609 3.1e-06 55.1 53 50.9
A05p29120 Brassica napus HOM05D001339 ORTHO05D003609 3.1e-06 55.1 53 50.9
C05p44520 Brassica napus HOM05D001339 ORTHO05D003609 3.1e-06 55.1 53 50.9
BolC5t33176H Brassica oleracea HOM05D001339 ORTHO05D003609 3.1e-06 55.1 53 50.9
BraA05t21795Z Brassica rapa HOM05D001339 ORTHO05D003609 3.1e-06 55.1 53 50.9
TWI74G0753 Tripterygium wilfordii HOM05D001339 ORTHO05D003609 3.1e-06 55.1 48 54.2


User provided reference genes

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