Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02427 Aquilegia oxysepala HOM05D007134 ORTHO05D009004 2.1e-188 662.1 324 100.0
PSO782G3567 Papaver somniferum HOM05D007134 ORTHO05D009004 8.5e-129 464.2 319 68.0
TAR629G3531 Trochodendron aralioides HOM05D007134 ORTHO05D009004 1.2e-127 460.3 325 67.7
Atru.chr6.1744 Acer truncatum HOM05D007134 ORTHO05D009004 1.7e-124 449.9 323 66.9
Dinv28939 Davidia involucrata HOM05D007134 ORTHO05D009004 3.7e-124 448.7 305 70.2
Actinidia03384 Actinidia chinensis HOM05D007134 ORTHO05D009004 2.2e-121 439.5 304 67.4
Hma1.2p1_0991F.1_g244990 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 6.5e-121 438.0 301 69.1
Hma1.2p1_2785F.1_g328490 Hydrangea macrophylla HOM05D007134 ORTHO05D009004 6.5e-121 438.0 299 69.6
Cfa012416 Carpinus fangiana HOM05D007134 ORTHO05D009004 1.9e-120 436.4 301 68.4
CiPaw.11G091800 Carya illinoinensis HOM05D007134 ORTHO05D009004 7.2e-120 434.5 301 68.4
Haze_08260 Corylus avellana HOM05D007134 ORTHO05D009004 2.1e-119 433.0 316 66.1
GSVIVG01013189001 Vitis vinifera HOM05D007134 ORTHO05D009004 2.7e-119 432.6 288 70.8
Lj8A293T18 Lonicera japonica HOM05D007134 ORTHO05D009004 3.6e-119 432.2 298 69.5
CSS0021568 Camellia sinensis var. sinensis HOM05D007134 ORTHO05D009004 6.1e-119 431.4 313 66.1
Peaxi162Scf00006g04220 Petunia axillaris HOM05D007134 ORTHO05D009004 4.4e-117 425.2 298 66.1
Nitab4.5_0002931g0030 Nicotiana tabacum HOM05D007134 ORTHO05D009004 1.3e-116 423.7 298 67.1
Manes.15G172000 Manihot esculenta HOM05D007134 ORTHO05D009004 2.2e-116 422.9 295 66.8
Solyc08g077090.3 Solanum lycopersicum HOM05D007134 ORTHO05D009004 2.8e-116 422.5 298 65.8
Potri.001G144000 Populus trichocarpa HOM05D007134 ORTHO05D009004 4.8e-116 421.8 294 66.0
Sc01g0007540 Simmondsia chinensis HOM05D007134 ORTHO05D009004 1.4e-115 420.2 302 65.6
TPR.G28658 Trifolium pratense HOM05D007134 ORTHO05D009004 1.4e-115 420.2 307 63.8
CAN.G1659.3 Capsicum annuum HOM05D007134 ORTHO05D009004 3.1e-115 419.1 298 65.8
Thecc.03G230400 Theobroma cacao HOM05D007134 ORTHO05D009004 3.1e-115 419.1 301 65.4
Sopen08g025670 Solanum pennellii HOM05D007134 ORTHO05D009004 4.1e-115 418.7 290 67.2
Prupe.5G039700 Prunus persica HOM05D007134 ORTHO05D009004 3.5e-114 415.6 306 63.7
TWI81G0484 Tripterygium wilfordii HOM05D007134 ORTHO05D009004 7.7e-114 414.5 297 64.3
COL.COLO4_17065 Corchorus olitorius HOM05D007134 ORTHO05D009004 1.0e-113 414.1 301 63.8
MD06G1032400 Malus domestica HOM05D007134 ORTHO05D009004 1.0e-113 414.1 304 64.1
Phvul.003G230000 Phaseolus vulgaris HOM05D007134 ORTHO05D009004 1.3e-113 413.7 288 66.0
Psat4g079040 Pisum sativum HOM05D007134 ORTHO05D009004 2.2e-113 412.9 296 65.2
EL10Ac5g12144 Beta vulgaris HOM05D007134 ORTHO05D009004 3.8e-113 412.1 315 62.5
Lalb_Chr05g0220571 Lupinus albus HOM05D007134 ORTHO05D009004 3.8e-113 412.1 306 64.4
MSTRG.6669 Avicennia marina HOM05D007134 ORTHO05D009004 5.0e-113 411.8 299 65.6
ClCG10G001760 Citrullus lanatus HOM05D007134 ORTHO05D009004 5.0e-113 411.8 304 63.8
Glyma.05G112400 Glycine max HOM05D007134 ORTHO05D009004 6.5e-113 411.4 304 63.5
Ca_22068_v3 Cicer arietinum L. HOM05D007134 ORTHO05D009004 8.5e-113 411.0 305 61.6
Lj4g0007831 Lotus japonicus HOM05D007134 ORTHO05D009004 2.5e-112 409.5 313 61.7
Nitab4.5_0001276g0070 Nicotiana tabacum HOM05D007134 ORTHO05D009004 2.5e-112 409.5 288 67.0
CANSAT21G0276 Cannabis sativa HOM05D007134 ORTHO05D009004 3.2e-112 409.1 309 63.1
FAN08G2031 Fragaria x ananassa HOM05D007134 ORTHO05D009004 3.2e-112 409.1 314 63.4
PGSC0003DMG400017530 Solanum tuberosum HOM05D007134 ORTHO05D009004 7.2e-112 407.9 324 61.1
Glyma.17G154600 Glycine max HOM05D007134 ORTHO05D009004 3.6e-111 405.6 300 63.7
RcHm_v2.0_Chr7g0209231 Rosa chinensis HOM05D007134 ORTHO05D009004 3.6e-111 405.6 313 62.0
FvH4_5g21740 Fragaria vesca HOM05D007134 ORTHO05D009004 4.7e-111 405.2 314 62.7
Gohir.D12G211900 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.7e-111 405.2 298 64.4
Gorai.008G227500 Gossypium raimondii HOM05D007134 ORTHO05D009004 4.7e-111 405.2 298 64.4
Duzib205G1618 Durio zibethinus HOM05D007134 ORTHO05D009004 6.1e-111 404.8 301 63.8
FAN13G3184 Fragaria x ananassa HOM05D007134 ORTHO05D009004 1.4e-110 403.7 307 63.2
THA.LOC104814437 Tarenaya hassleriana HOM05D007134 ORTHO05D009004 2.3e-110 402.9 298 62.4
Sabra01G0112400 Salix brachista HOM05D007134 ORTHO05D009004 4.0e-110 402.1 325 59.4
CDE12G0960 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 8.8e-110 401.0 297 65.7
arahy.Tifrunner.gnm1.ann1.2XNM6Q Arachis hypogaea HOM05D007134 ORTHO05D009004 2.0e-109 399.8 308 62.7
MELO3C013860.2 Cucumis melo HOM05D007134 ORTHO05D009004 2.0e-109 399.8 306 61.1
ECA233G0754 Erigeron canadensis HOM05D007134 ORTHO05D009004 2.6e-109 399.4 293 63.8
arahy.Tifrunner.gnm1.ann1.40JZG2 Arachis hypogaea HOM05D007134 ORTHO05D009004 4.4e-109 398.7 308 62.3
AUR62007266 Chenopodium quinoa HOM05D007134 ORTHO05D009004 5.7e-109 398.3 322 60.9
Ciclev10032247m.g Citrus clementina HOM05D007134 ORTHO05D009004 2.2e-108 396.4 296 63.2
A03p19520 Brassica napus HOM05D007134 ORTHO05D009004 2.8e-108 396.0 298 61.4
BraA03t11205Z Brassica rapa HOM05D007134 ORTHO05D009004 2.8e-108 396.0 298 61.4
CsaV3_3G001860 Cucumis sativus L. HOM05D007134 ORTHO05D009004 2.8e-108 396.0 295 61.7
Thhalv10016981m.g Eutrema salsugineum HOM05D007134 ORTHO05D009004 2.8e-108 396.0 298 63.4
AL4G31350 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 8.3e-108 394.4 298 63.1
ATR0049G037 Amborella trichopoda HOM05D007134 ORTHO05D009004 1.1e-107 394.0 293 63.1
C03p22750 Brassica napus HOM05D007134 ORTHO05D009004 1.1e-107 394.0 298 61.4
CDE04G0512 Ceratophyllum demersum HOM05D007134 ORTHO05D009004 1.4e-107 393.7 305 64.3
Ah.12g054890 Amaranthus hybridus HOM05D007134 ORTHO05D009004 2.4e-107 392.9 301 62.8
FAN18G1678 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.1e-107 392.1 339 58.1
Sed0020644 Sechium edule HOM05D007134 ORTHO05D009004 5.3e-107 391.7 324 58.3
AL457U10010 Arabidopsis lyrata HOM05D007134 ORTHO05D009004 7.0e-107 391.3 298 62.8
AT2G35320 Arabidopsis thaliana HOM05D007134 ORTHO05D009004 1.2e-106 390.6 318 58.8
Aa31LG9G15330 Aethionema arabicum HOM05D007134 ORTHO05D009004 3.5e-106 389.0 314 60.2
BolC3t14673H Brassica oleracea HOM05D007134 ORTHO05D009004 4.5e-106 388.7 298 60.4
Rhsim11G0013400 Rhododendron simsii HOM05D007134 ORTHO05D009004 1.3e-105 387.1 449 47.7
Sp4g17520 Schrenkiella parvula HOM05D007134 ORTHO05D009004 1.7e-105 386.7 296 60.8
Carub.0004s1701 Capsella rubella HOM05D007134 ORTHO05D009004 2.9e-105 386.0 296 60.8
PGR042G2424 Punica granatum HOM05D007134 ORTHO05D009004 3.8e-105 385.6 310 60.3
Hund11255 Selenicereus undatus HOM05D007134 ORTHO05D009004 6.5e-105 384.8 324 61.1
Eucgr.E00292 Eucalyptus grandis HOM05D007134 ORTHO05D009004 8.5e-105 384.4 317 59.6
Oeu036071.3 Olea europaea HOM05D007134 ORTHO05D009004 1.9e-104 383.3 325 58.8
Cc08_g02480 Coffea canephora HOM05D007134 ORTHO05D009004 5.5e-104 381.7 289 62.3
SGA_v2.0_scaffold34G13941 Striga asiatica HOM05D007134 ORTHO05D009004 5.5e-104 381.7 296 62.2
CARHR129460 Cardamine hirsuta HOM05D007134 ORTHO05D009004 2.7e-103 379.4 298 60.4
SalBow7G3039 Salvia bowleyana HOM05D007134 ORTHO05D009004 1.8e-102 376.7 298 61.7
Lsat_1_v5_gn_6_64760 Lactuca sativa HOM05D007134 ORTHO05D009004 2.3e-102 376.3 297 59.6
HanXRQChr06g0178411 Helianthus annuus HOM05D007134 ORTHO05D009004 4.0e-102 375.6 301 59.5
SalBow7G1996 Salvia bowleyana HOM05D007134 ORTHO05D009004 5.2e-102 375.2 303 61.4
DCAR_032214 Daucus carota HOM05D007134 ORTHO05D009004 6.8e-102 374.8 297 58.6
Zm00001eb417090 Zea mays HOM05D007134 ORTHO05D009004 3.7e-100 369.0 309 56.3
Migut.M00165 Erythranthe guttata HOM05D007134 ORTHO05D009004 9.1e-99 364.4 289 60.2
Os06g0110100 Oryza sativa ssp. japonica HOM05D007134 ORTHO05D009004 2.7e-98 362.8 306 57.2
Gohir.A12G209200 Gossypium hirsutum HOM05D007134 ORTHO05D009004 4.5e-98 362.1 263 65.8
vmacro00339 Vaccinium macrocarpon HOM05D007134 ORTHO05D009004 4.5e-98 362.1 450 45.3
PSO063G6706 Papaver somniferum HOM05D007134 ORTHO05D009004 1.7e-97 360.1 319 55.8
Nn6g33621 Nelumbo nucifera HOM05D007134 ORTHO05D009004 8.0e-95 351.3 299 58.2
unitig_749.g14086 Utricularia gibba HOM05D007134 ORTHO05D009004 2.4e-91 339.7 289 56.7
BcaC01g05731 Brassica carinata HOM05D007134 ORTHO05D009004 1.1e-88 330.9 298 53.0
FAN04G0135 Fragaria x ananassa HOM05D007134 ORTHO05D009004 4.0e-86 322.4 314 53.5
AUR62018733 Chenopodium quinoa HOM05D007134 ORTHO05D009004 6.8e-86 321.6 321 51.1
Pp3c2_15970 Physcomitrium patens HOM05D007134 ORTHO05D009004 4.4e-77 292.4 309 45.3
Medtr4g098510 Medicago truncatula HOM05D007134 ORTHO05D009004 7.1e-75 285.0 237 58.6
AagrBONN_evm.TU.Sc2ySwM_117.2263 Anthoceros agrestis HOM05D007134 ORTHO05D009004 4.4e-69 265.8 305 43.0
Pp3c1_31250 Physcomitrium patens HOM05D007134 ORTHO05D009004 9.6e-64 248.1 309 41.4
VMungo0251G0669 Vigna mungo HOM05D007134 ORTHO05D009004 1.4e-62 244.2 182 63.2
Pp3c2_10940 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.5e-58 229.6 317 40.4
QL12p006104 Quercus lobata HOM05D007134 ORTHO05D009004 1.3e-52 211.1 150 65.3
Pp3c17_17110 Physcomitrium patens HOM05D007134 ORTHO05D009004 3.0e-49 199.9 256 40.6
VMungo0251G0585 Vigna mungo HOM05D007134 ORTHO05D009004 5.8e-45 185.7 121 69.4
SEGI_12545 Sequoiadendron giganteum HOM05D007134 ORTHO05D009004 2.8e-39 166.8 125 61.6
Cpa.g.sc71.65 Carica papaya HOM05D007134 ORTHO05D009004 3.7e-31 139.8 88 64.8
Nn6g33134 Nelumbo nucifera HOM05D007134 ORTHO05D009004 2.1e-10 70.9 64 59.4


User provided reference genes

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