Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02349 Aquilegia oxysepala HOM05D008113 ORTHO05D009793 2.3e-182 642.1 325 100.0
Nn1g08044 Nelumbo nucifera HOM05D008113 ORTHO05D009793 2.1e-26 124.0 352 33.8
PSO063G7600 Papaver somniferum HOM05D008113 ORTHO05D009793 3.7e-23 113.2 331 33.8
PSO782G0685 Papaver somniferum HOM05D008113 ORTHO05D009793 1.1e-22 111.7 331 33.8
MBI04_g23600_MAGBIO Magnolia biondii HOM05D008113 ORTHO05D009793 1.2e-21 108.2 334 34.1
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.3e-20 104.8 166 43.4
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.3e-20 104.8 166 43.4
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 1.1e-19 101.7 170 43.5
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 4.2e-19 99.8 140 45.7
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 9.4e-19 98.6 152 42.8
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.1e-18 95.9 155 43.2
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.0e-17 95.1 153 47.1
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 1.0e-17 95.1 151 41.7
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 3.9e-17 93.2 168 41.7
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 5.2e-17 92.8 152 44.1
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 1.1e-16 91.7 181 40.9
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.5e-16 91.3 155 41.9
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 1.5e-16 91.3 153 42.5
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 2.6e-16 90.5 145 41.4
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 3.3e-16 90.1 162 42.0
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 4.4e-16 89.7 154 43.5
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 9.7e-16 88.6 162 40.7
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 1.7e-15 87.8 155 40.6
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 2.8e-15 87.0 152 42.1
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 2.8e-15 87.0 153 42.5
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.7e-15 86.7 158 39.9
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 4.8e-15 86.3 152 41.4
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 6.3e-15 85.9 153 42.5
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 6.3e-15 85.9 152 41.4
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 8.2e-15 85.5 152 41.4
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 1.4e-14 84.7 157 41.4
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 3.1e-14 83.6 143 42.0
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 4.1e-14 83.2 153 39.2
Rhsim07G0126900 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.2e-13 81.6 168 41.1
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.0e-13 80.9 151 38.4
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 3.5e-13 80.1 163 39.9
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 3.5e-13 80.1 158 38.6
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 5.9e-13 79.3 153 39.9
Rhsim07G0125800 Rhododendron simsii HOM05D008113 ORTHO05D009793 1.3e-12 78.2 153 42.5
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 2.2e-12 77.4 158 38.0
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 3.8e-12 76.6 160 40.0
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 8.5e-12 75.5 153 39.2
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 8.5e-12 75.5 151 39.1
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 4.2e-11 73.2 160 36.9
Ah.12g055040 Amaranthus hybridus HOM05D008113 ORTHO05D009793 5.5e-11 72.8 155 34.2
CANSAT21G0751 Cannabis sativa HOM05D008113 ORTHO05D009793 9.4e-11 72.0 179 36.3
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 9.4e-11 72.0 127 40.9
Actinidia09205 Actinidia chinensis HOM05D008113 ORTHO05D009793 1.6e-10 71.2 91 52.7
FAN18G0344 Fragaria x ananassa HOM05D008113 ORTHO05D009793 6.1e-10 69.3 86 50.0
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 6.1e-10 69.3 180 36.7
EL10Ac5g12119 Beta vulgaris HOM05D008113 ORTHO05D009793 6.7e-09 65.9 145 36.6
Actinidia09200 Actinidia chinensis HOM05D008113 ORTHO05D009793 3.3e-08 63.5 147 38.1
Sc22g0001540 Simmondsia chinensis HOM05D008113 ORTHO05D009793 3.3e-08 63.5 149 31.5
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 2.2e-07 60.8 156 35.3
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.8e-07 60.5 164 32.3
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 6.3e-07 59.3 152 32.9
ECA233G2707 Erigeron canadensis HOM05D008113 ORTHO05D009793 1.4e-06 58.2 73 46.6
AUR62018715 Chenopodium quinoa HOM05D008113 ORTHO05D009793 2.4e-06 57.4 121 37.2
SGA_v2.0_scaffold20G09258 Striga asiatica HOM05D008113 ORTHO05D009793 4.1e-06 56.6 153 33.3


User provided reference genes

Program Settings