Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02279 Aquilegia oxysepala HOM05D006310 ORTHO05D007768 1.4e-90 337.0 211 100.0
MBI04_g20344_MAGBIO Magnolia biondii HOM05D006310 ORTHO05D007768 3.9e-27 126.3 227 44.5
TAR629G1434 Trochodendron aralioides HOM05D006310 ORTHO05D007768 1.6e-25 120.9 225 46.2
Dinv28973 Davidia involucrata HOM05D006310 ORTHO05D007768 4.0e-24 116.3 223 39.0
PSO063G6445 Papaver somniferum HOM05D006310 ORTHO05D007768 1.5e-23 114.4 231 38.5
Nn1g00145 Nelumbo nucifera HOM05D006310 ORTHO05D007768 2.0e-23 114.0 223 43.5
Dinv25232 Davidia involucrata HOM05D006310 ORTHO05D007768 9.8e-23 111.7 223 39.9
PSO782G4606 Papaver somniferum HOM05D006310 ORTHO05D007768 9.8e-23 111.7 232 37.5
Gohir.A08G155500 Gossypium hirsutum HOM05D006310 ORTHO05D007768 4.9e-22 109.4 216 37.0
QL12p004739 Quercus lobata HOM05D006310 ORTHO05D007768 6.4e-22 109.0 220 38.2
Gohir.D08G176100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.9e-21 107.5 215 36.7
Haze_08202 Corylus avellana HOM05D006310 ORTHO05D007768 9.2e-21 105.1 216 37.0
Duzib205G0324 Durio zibethinus HOM05D006310 ORTHO05D007768 1.2e-20 104.8 217 36.4
Gorai.004G183900 Gossypium raimondii HOM05D006310 ORTHO05D007768 2.0e-20 104.0 215 36.3
Potri.001G140500 Populus trichocarpa HOM05D006310 ORTHO05D007768 2.7e-20 103.6 212 35.4
Atru.chr6.1649 Acer truncatum HOM05D006310 ORTHO05D007768 1.3e-19 101.3 217 35.5
Manes.15G192960 Manihot esculenta HOM05D006310 ORTHO05D007768 1.3e-19 101.3 220 39.5
Cfa012467 Carpinus fangiana HOM05D006310 ORTHO05D007768 3.9e-19 99.8 218 35.8
COL.COLO4_16996 Corchorus olitorius HOM05D006310 ORTHO05D007768 6.6e-19 99.0 217 35.5
Lj2A236G56 Lonicera japonica HOM05D006310 ORTHO05D007768 6.6e-19 99.0 223 39.9
CiPaw.12G065800 Carya illinoinensis HOM05D006310 ORTHO05D007768 8.6e-19 98.6 221 38.5
Gorai.007G033000 Gossypium raimondii HOM05D006310 ORTHO05D007768 1.1e-18 98.2 214 35.0
Sabra01G0109300 Salix brachista HOM05D006310 ORTHO05D007768 1.1e-18 98.2 214 34.1
CDE11G1127 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 1.9e-18 97.4 221 40.7
Nn3g19447 Nelumbo nucifera HOM05D006310 ORTHO05D007768 1.9e-18 97.4 230 40.0
Gohir.D11G030100 Gossypium hirsutum HOM05D006310 ORTHO05D007768 5.6e-18 95.9 214 34.6
Nitab4.5_0003625g0020 Nicotiana tabacum HOM05D006310 ORTHO05D007768 7.3e-18 95.5 227 33.0
Actinidia03362 Actinidia chinensis HOM05D006310 ORTHO05D007768 1.2e-17 94.7 216 35.2
Oeu006245.1 Olea europaea HOM05D006310 ORTHO05D007768 1.2e-17 94.7 226 34.5
CSS0006923 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 2.1e-17 94.0 227 35.2
Thecc.03G224800 Theobroma cacao HOM05D006310 ORTHO05D007768 2.8e-17 93.6 216 34.3
Nitab4.5_0000127g0100 Nicotiana tabacum HOM05D006310 ORTHO05D007768 4.7e-17 92.8 226 33.2
CDE02G1298 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 6.2e-17 92.4 218 42.2
Duzib084G0468 Durio zibethinus HOM05D006310 ORTHO05D007768 6.2e-17 92.4 215 34.0
PGR031G3884 Punica granatum HOM05D006310 ORTHO05D007768 1.4e-16 91.3 222 38.7
CSS0048597 Camellia sinensis var. sinensis HOM05D006310 ORTHO05D007768 1.8e-16 90.9 222 34.2
Gohir.A11G031400 Gossypium hirsutum HOM05D006310 ORTHO05D007768 1.8e-16 90.9 213 33.3
CANSAT21G0851 Cannabis sativa HOM05D006310 ORTHO05D007768 2.3e-16 90.5 215 38.6
Sopen08g025280 Solanum pennellii HOM05D006310 ORTHO05D007768 2.3e-16 90.5 223 32.3
DCAR_008251 Daucus carota HOM05D006310 ORTHO05D007768 4.0e-16 89.7 217 33.6
Actinidia25977 Actinidia chinensis HOM05D006310 ORTHO05D007768 5.2e-16 89.4 216 38.0
Solyc08g076730.4 Solanum lycopersicum HOM05D006310 ORTHO05D007768 5.2e-16 89.4 223 31.8
PGSC0003DMG400017523 Solanum tuberosum HOM05D006310 ORTHO05D007768 1.2e-15 88.2 226 32.3
Prupe.5G032400 Prunus persica HOM05D006310 ORTHO05D007768 5.8e-15 85.9 216 31.9
Lalb_Chr05g0215911 Lupinus albus HOM05D006310 ORTHO05D007768 6.4e-14 82.4 218 33.5
Cc08_g03010 Coffea canephora HOM05D006310 ORTHO05D007768 1.1e-13 81.6 219 32.0
Hma1.2p1_1379F.1_g279220 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 1.4e-13 81.3 215 32.1
THA.LOC104827750 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 1.4e-13 81.3 212 31.1
TWI15G1132 Tripterygium wilfordii HOM05D006310 ORTHO05D007768 1.9e-13 80.9 219 32.0
CAN.G298.28 Capsicum annuum HOM05D006310 ORTHO05D007768 2.4e-13 80.5 213 32.4
ClCG09G011810 Citrullus lanatus HOM05D006310 ORTHO05D007768 5.4e-13 79.3 228 30.3
CiPaw.11G095600 Carya illinoinensis HOM05D006310 ORTHO05D007768 1.6e-12 77.8 214 29.9
Lsat_1_v5_gn_3_18800 Lactuca sativa HOM05D006310 ORTHO05D007768 1.6e-12 77.8 210 39.0
Eucgr.D02211 Eucalyptus grandis HOM05D006310 ORTHO05D007768 2.1e-12 77.4 222 36.5
Hma1.2p1_0303F.1_g118950 Hydrangea macrophylla HOM05D006310 ORTHO05D007768 2.1e-12 77.4 232 32.3
ATR0665G126 Amborella trichopoda HOM05D006310 ORTHO05D007768 2.7e-12 77.0 235 33.6
MD06G1036900 Malus domestica HOM05D006310 ORTHO05D007768 2.7e-12 77.0 212 32.5
Cpa.g.sc90.63 Carica papaya HOM05D006310 ORTHO05D007768 4.6e-12 76.3 217 30.4
Actinidia14793 Actinidia chinensis HOM05D006310 ORTHO05D007768 6.0e-12 75.9 218 31.7
ECA246G3187 Erigeron canadensis HOM05D006310 ORTHO05D007768 7.8e-12 75.5 216 32.4
CDE06G1171 Ceratophyllum demersum HOM05D006310 ORTHO05D007768 3.0e-11 73.6 206 30.1
Sp7g16170 Schrenkiella parvula HOM05D006310 ORTHO05D007768 5.1e-11 72.8 211 32.2
vmacro00314 Vaccinium macrocarpon HOM05D006310 ORTHO05D007768 5.1e-11 72.8 213 34.3
THA.LOC104806719 Tarenaya hassleriana HOM05D006310 ORTHO05D007768 1.5e-10 71.2 213 29.6
Aa31LG6G690 Aethionema arabicum HOM05D006310 ORTHO05D007768 2.5e-10 70.5 212 38.7
MSTRG.13750 Avicennia marina HOM05D006310 ORTHO05D007768 3.3e-10 70.1 214 27.1
A08p13440 Brassica napus HOM05D006310 ORTHO05D007768 7.3e-10 68.9 214 35.0
BraA08t33321Z Brassica rapa HOM05D006310 ORTHO05D007768 1.2e-09 68.2 214 35.0
CARHR224680 Cardamine hirsuta HOM05D006310 ORTHO05D007768 1.6e-09 67.8 215 36.7
Thhalv10026016m.g Eutrema salsugineum HOM05D006310 ORTHO05D007768 3.6e-09 66.6 223 29.6
Peaxi162Scf00184g00001 Petunia axillaris HOM05D006310 ORTHO05D007768 8.1e-09 65.5 224 34.8
CsaV3_3G049010 Cucumis sativus L. HOM05D006310 ORTHO05D007768 1.1e-08 65.1 224 28.1
BcaNung00042 Brassica carinata HOM05D006310 ORTHO05D007768 1.4e-08 64.7 212 33.0
BolC8t48532H Brassica oleracea HOM05D006310 ORTHO05D007768 1.4e-08 64.7 214 34.1
HanXRQChr06g0167641 Helianthus annuus HOM05D006310 ORTHO05D007768 1.4e-08 64.7 210 28.1
Sed0010075 Sechium edule HOM05D006310 ORTHO05D007768 2.3e-08 63.9 227 36.6
GSVIVG01013133001 Vitis vinifera HOM05D006310 ORTHO05D007768 2.3e-08 63.9 92 37.0
HanXRQChr17g0536151 Helianthus annuus HOM05D006310 ORTHO05D007768 5.2e-08 62.8 213 29.1
HPP92_014659 Vanilla planifolia HOM05D006310 ORTHO05D007768 5.2e-08 62.8 182 29.7
EL10Ac5g12081 Beta vulgaris HOM05D006310 ORTHO05D007768 6.8e-08 62.4 42 59.5
Atru.chr7.1135 Acer truncatum HOM05D001903 ORTHO05D001847 1.2e-07 61.6 39 66.7
AT4G17940 Arabidopsis thaliana HOM05D006310 ORTHO05D007768 1.5e-07 61.2 216 34.7
VMungo1080G0874 Vigna mungo HOM05D006310 ORTHO05D007768 1.5e-07 61.2 215 27.0
AL7G36570 Arabidopsis lyrata HOM05D006310 ORTHO05D007768 2.0e-07 60.8 215 34.4
COL.COLO4_35107 Corchorus olitorius HOM05D001903 ORTHO05D001847 2.0e-07 60.8 106 43.4
Rhsim11G0017700 Rhododendron simsii HOM05D006310 ORTHO05D007768 2.0e-07 60.8 220 30.9
SEGI_00832 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 2.6e-07 60.5 35 68.6
Zm00001eb024820 Zea mays HOM05D006310 ORTHO05D007768 3.4e-07 60.1 40 57.5
Peaxi162Scf00785g00317 Petunia axillaris HOM05D001903 ORTHO05D001847 4.4e-07 59.7 38 63.2
PGR102G1074 Punica granatum HOM05D001903 ORTHO05D001847 4.4e-07 59.7 35 65.7
Glyma.01G017000 Glycine max HOM05D006310 ORTHO05D007768 5.8e-07 59.3 213 29.6
VMungo1215G2715 Vigna mungo HOM05D006310 ORTHO05D007768 7.6e-07 58.9 216 27.8
Nitab4.5_0000209g0150 Nicotiana tabacum HOM05D001903 ORTHO05D001847 9.9e-07 58.5 39 61.5
SEGI_13914 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 9.9e-07 58.5 41 61.0
arahy.Tifrunner.gnm1.ann1.P6RCLW Arachis hypogaea HOM05D006310 ORTHO05D007768 1.3e-06 58.2 221 29.0
arahy.Tifrunner.gnm1.ann1.U64MAA Arachis hypogaea HOM05D006310 ORTHO05D007768 1.3e-06 58.2 221 29.0
BcaC07g38109 Brassica carinata HOM05D006310 ORTHO05D007768 1.3e-06 58.2 206 32.0
Gohir.D06G054100 Gossypium hirsutum HOM05D001903 ORTHO05D001847 1.7e-06 57.8 91 48.4
Gorai.010G063200 Gossypium raimondii HOM05D001903 ORTHO05D001847 1.7e-06 57.8 91 48.4
RcHm_v2.0_Chr7g0210241 Rosa chinensis HOM05D006310 ORTHO05D007768 1.7e-06 57.8 37 62.2
Lj2g0018875 Lotus japonicus HOM05D006310 ORTHO05D007768 2.2e-06 57.4 216 29.2
Os10g0576600 Oryza sativa ssp. japonica HOM05D006310 ORTHO05D007768 2.9e-06 57.0 40 55.0
Potri.006G068200 Populus trichocarpa HOM05D001903 ORTHO05D001847 2.9e-06 57.0 35 65.7
Carub.0007s2340 Capsella rubella HOM05D006310 ORTHO05D007768 4.9e-06 56.2 221 34.8
FvH4_5g22450 Fragaria vesca HOM05D006310 ORTHO05D007768 4.9e-06 56.2 38 60.5
FAN18G0493 Fragaria x ananassa HOM05D006310 ORTHO05D007768 4.9e-06 56.2 38 60.5
Sabra18G0110800 Salix brachista HOM05D001903 ORTHO05D001847 4.9e-06 56.2 75 38.7
SEGI_03197 Sequoiadendron giganteum HOM05D006310 ORTHO05D007768 4.9e-06 56.2 37 59.5
BcaB04g18451 Brassica carinata HOM05D006310 ORTHO05D007768 6.4e-06 55.8 213 34.3
CDE06G1151 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 6.4e-06 55.8 39 56.4
CDE07G0415 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 6.4e-06 55.8 39 56.4
Dinv08652 Davidia involucrata HOM05D001903 ORTHO05D001847 6.4e-06 55.8 35 60.0
FAN18G3281 Fragaria x ananassa HOM05D006310 ORTHO05D007768 6.4e-06 55.8 210 26.7
SEGI_04018 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 6.4e-06 55.8 34 64.7
SEGI_10096 Sequoiadendron giganteum HOM05D001903 ORTHO05D001847 6.4e-06 55.8 40 57.5
Aqoxy3G02851 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 8.4e-06 55.5 35 65.7
Aqoxy54s001 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 8.4e-06 55.5 35 65.7
Aqoxy7G03684 Aquilegia oxysepala HOM05D001903 ORTHO05D001847 8.4e-06 55.5 35 65.7
Nitab4.5_0006708g0010 Nicotiana tabacum HOM05D001903 ORTHO05D001847 8.4e-06 55.5 38 57.9
RcHm_v2.0_Chr2g0135711 Rosa chinensis HOM05D001903 ORTHO05D001847 8.4e-06 55.5 40 57.5
Hund14348 Selenicereus undatus HOM05D006310 ORTHO05D007768 8.4e-06 55.5 38 57.9


User provided reference genes

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