Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02264 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.1e-119 433.3 219 100.0
Aqoxy4G00886 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 6.7e-61 238.0 168 76.8
Aqoxy4G00561 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 1.4e-34 150.6 174 54.0
Nn8g39635 Nelumbo nucifera HOM05D002727 ORTHO05D002856 2.4e-34 149.8 178 50.0
Aqoxy4G00571 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 3.1e-34 149.4 167 55.1
Nn8g40185 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.2e-33 147.5 170 51.2
Rhsim01G0020200 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.2e-33 147.5 186 46.8
Rhsim01G0019500 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.3e-32 144.1 184 47.3
Nn8g40139 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.7e-32 143.7 170 50.6
Nn8g39630 Nelumbo nucifera HOM05D002727 ORTHO05D002856 5.0e-32 142.1 178 49.4
Rhsim01G0018300 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.1e-31 141.0 185 44.9
Nn2g12178 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.2e-31 139.0 158 51.9
Nn2g12179 Nelumbo nucifera HOM05D002727 ORTHO05D002856 4.2e-31 139.0 160 50.6
Nn8g40141 Nelumbo nucifera HOM05D002727 ORTHO05D002856 5.5e-31 138.7 170 48.8
Nn8g40140 Nelumbo nucifera HOM05D002727 ORTHO05D002856 9.4e-31 137.9 170 48.8
Dinv42803 Davidia involucrata HOM05D002727 ORTHO05D002856 3.7e-27 125.9 162 50.0
Dinv43298 Davidia involucrata HOM05D002727 ORTHO05D002856 3.7e-27 125.9 162 50.0
MD03G1035100 Malus domestica HOM05D002727 ORTHO05D002856 2.4e-26 123.2 159 44.0
Prupe.1G100500 Prunus persica HOM05D002727 ORTHO05D002856 3.1e-26 122.9 192 42.2
Nn2g12182 Nelumbo nucifera HOM05D002727 ORTHO05D002856 1.2e-25 120.9 143 50.3
Rhsim01G0020900 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.6e-25 120.6 185 42.2
Rhsim01G0018600 Rhododendron simsii HOM05D002727 ORTHO05D002856 5.9e-25 118.6 138 49.3
Dinv42800 Davidia involucrata HOM05D002727 ORTHO05D002856 2.2e-24 116.7 145 51.0
Dinv43301 Davidia involucrata HOM05D002727 ORTHO05D002856 2.2e-24 116.7 145 51.0
GSVIVG01023712001 Vitis vinifera HOM05D002727 ORTHO05D002856 5.0e-24 115.5 202 40.6
MD03G1107500 Malus domestica HOM05D002727 ORTHO05D002856 6.5e-24 115.2 148 43.2
Prupe.1G100600 Prunus persica HOM05D002727 ORTHO05D002856 6.5e-24 115.2 149 44.3
Actinidia02639 Actinidia chinensis HOM05D002727 ORTHO05D002856 8.5e-24 114.8 156 46.2
TWI34G1383 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 2.3e-21 106.7 173 42.8
MD15G1046300 Malus domestica HOM05D002727 ORTHO05D002856 3.0e-21 106.3 183 39.3
QL02p098200 Quercus lobata HOM05D002727 ORTHO05D002856 3.7e-19 99.4 126 46.0
Aqoxy2G00907 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 2.1e-14 83.6 133 40.6
Rhsim01G0017200 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.0e-13 81.3 65 56.9
Rhsim01G0018500 Rhododendron simsii HOM05D002727 ORTHO05D002856 1.0e-13 81.3 65 56.9
ClCG01G006130 Citrullus lanatus HOM05D002727 ORTHO05D002856 1.8e-13 80.5 133 37.6
CANSAT01G3036 Cannabis sativa HOM05D002727 ORTHO05D002856 5.2e-13 79.0 135 42.2
DCAR_007283 Daucus carota HOM05D002727 ORTHO05D002856 5.2e-13 79.0 137 35.8
ATR0012G059 Amborella trichopoda HOM05D002727 ORTHO05D002856 6.8e-13 78.6 134 40.3
QL01p002083 Quercus lobata HOM05D002727 ORTHO05D002856 6.8e-13 78.6 139 36.0
TAR622G1289 Trochodendron aralioides HOM05D002727 ORTHO05D002856 6.8e-13 78.6 183 32.8
Duzib251G0433 Durio zibethinus HOM05D002727 ORTHO05D002856 8.8e-13 78.2 135 38.5
Eucgr.G02210 Eucalyptus grandis HOM05D002727 ORTHO05D002856 8.8e-13 78.2 135 37.0
Cpa.g.sc199.5 Carica papaya HOM05D013024 ORTHO05D015548 2.6e-12 76.6 148 35.1
Ciclev10017676m.g Citrus clementina HOM05D002727 ORTHO05D002856 3.4e-12 76.3 140 37.1
Eucgr.G02208 Eucalyptus grandis HOM05D002727 ORTHO05D002856 4.4e-12 75.9 136 36.0
Glyma.10G265700 Glycine max HOM05D002727 ORTHO05D002856 4.4e-12 75.9 150 35.3
Glyma.20G124900 Glycine max HOM05D002727 ORTHO05D002856 4.4e-12 75.9 144 36.1
Phvul.007G037300 Phaseolus vulgaris HOM05D002727 ORTHO05D002856 4.4e-12 75.9 144 36.8
Potri.008G127500 Populus trichocarpa HOM05D002727 ORTHO05D002856 5.7e-12 75.5 127 37.0
Aqoxy1G00996 Aquilegia oxysepala HOM05D002727 ORTHO05D002856 7.5e-12 75.1 134 37.3
Eucgr.G02206 Eucalyptus grandis HOM05D002727 ORTHO05D002856 7.5e-12 75.1 135 35.6
CSS0022209 Camellia sinensis var. sinensis HOM05D002727 ORTHO05D002856 9.8e-12 74.7 144 35.4
CDE04G0093 Ceratophyllum demersum HOM05D002727 ORTHO05D002856 9.8e-12 74.7 150 36.0
Nn3g16463 Nelumbo nucifera HOM05D002727 ORTHO05D002856 9.8e-12 74.7 135 37.0
PSO017G4651 Papaver somniferum HOM05D002727 ORTHO05D002856 9.8e-12 74.7 155 34.8
Sed0008746 Sechium edule HOM05D002727 ORTHO05D002856 1.7e-11 73.9 134 37.3
Sabra08G0096300 Salix brachista HOM05D002727 ORTHO05D002856 2.8e-11 73.2 119 35.3
Cpa.g.sc171.13 Carica papaya HOM05D002727 ORTHO05D002856 3.7e-11 72.8 132 33.3
Hma1.2p1_0114F.1_g055280 Hydrangea macrophylla HOM05D002727 ORTHO05D002856 3.7e-11 72.8 136 34.6
MD16G1031100 Malus domestica HOM05D002727 ORTHO05D002856 3.7e-11 72.8 137 38.7
arahy.Tifrunner.gnm1.ann1.E5JI7C Arachis hypogaea HOM05D002727 ORTHO05D002856 4.9e-11 72.4 135 38.5
MD13G1026900 Malus domestica HOM05D002727 ORTHO05D002856 4.9e-11 72.4 146 38.4
Cpa.g.sc65.122 Carica papaya HOM05D002727 ORTHO05D002856 6.3e-11 72.0 131 36.6
Lj5g0017764 Lotus japonicus HOM05D002727 ORTHO05D002856 6.3e-11 72.0 135 37.8
Manes.09G062812 Manihot esculenta HOM05D013024 ORTHO05D015548 6.3e-11 72.0 128 39.8
QL01p002288 Quercus lobata HOM05D002727 ORTHO05D002856 6.3e-11 72.0 134 35.1
arahy.Tifrunner.gnm1.ann1.NZR7KS Arachis hypogaea HOM05D002727 ORTHO05D002856 8.3e-11 71.6 135 38.5
CsaV3_5G028530 Cucumis sativus L. HOM05D002727 ORTHO05D002856 8.3e-11 71.6 131 35.1
Manes.17G103100 Manihot esculenta HOM05D002727 ORTHO05D002856 8.3e-11 71.6 131 35.9
DCAR_023615 Daucus carota HOM05D002727 ORTHO05D002856 1.1e-10 71.2 147 35.4
Peaxi162Scf00205g00023 Petunia axillaris HOM05D002727 ORTHO05D002856 1.1e-10 71.2 139 36.7
Dinv16190 Davidia involucrata HOM05D002727 ORTHO05D002856 1.4e-10 70.9 134 35.8
RcHm_v2.0_Chr4g0440841 Rosa chinensis HOM05D002727 ORTHO05D002856 1.4e-10 70.9 136 40.4
THA.LOC104824571 Tarenaya hassleriana HOM05D002727 ORTHO05D002856 1.4e-10 70.9 153 34.6
CANSAT64G1895 Cannabis sativa HOM05D002727 ORTHO05D002856 1.8e-10 70.5 129 37.2
FvH4_4g32150 Fragaria vesca HOM05D002727 ORTHO05D002856 1.8e-10 70.5 137 39.4
FAN12G1004 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-10 70.5 137 39.4
FAN22G0940 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.8e-10 70.5 137 39.4
Thecc.02G279300 Theobroma cacao HOM05D002727 ORTHO05D002856 1.8e-10 70.5 141 35.5
Thecc.02G278300 Theobroma cacao HOM05D002727 ORTHO05D002856 2.4e-10 70.1 134 36.6
CiPaw.05G247600 Carya illinoinensis HOM05D002727 ORTHO05D002856 4.1e-10 69.3 136 33.1
CiPaw.06G012900 Carya illinoinensis HOM05D002727 ORTHO05D002856 4.1e-10 69.3 135 37.0
FAN05G4306 Fragaria x ananassa HOM05D002727 ORTHO05D002856 5.4e-10 68.9 130 36.2
FvH4_6g53540 Fragaria vesca HOM05D002727 ORTHO05D002856 7.0e-10 68.6 131 35.9
HanXRQChr08g0212641 Helianthus annuus HOM05D002727 ORTHO05D002856 7.0e-10 68.6 133 36.8
VMungo0720G2475 Vigna mungo HOM05D002727 ORTHO05D002856 7.0e-10 68.6 147 34.0
Actinidia15249 Actinidia chinensis HOM05D002727 ORTHO05D002856 9.2e-10 68.2 145 35.2
MD13G1028200 Malus domestica HOM05D002727 ORTHO05D002856 9.2e-10 68.2 206 34.0
Thecc.09G156600 Theobroma cacao HOM05D013024 ORTHO05D015548 9.2e-10 68.2 163 36.2
Actinidia36683 Actinidia chinensis HOM05D002727 ORTHO05D002856 1.2e-09 67.8 145 34.5
MELO3C005314.2 Cucumis melo HOM05D002727 ORTHO05D002856 1.2e-09 67.8 126 34.9
FAN14G5438 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.6e-09 67.4 134 34.3
Manes.17G075200 Manihot esculenta HOM05D002727 ORTHO05D002856 1.6e-09 67.4 144 34.0
Solyc05g008320.1 Solanum lycopersicum HOM05D002727 ORTHO05D002856 1.6e-09 67.4 132 37.9
Sopen05g004150 Solanum pennellii HOM05D002727 ORTHO05D002856 1.6e-09 67.4 132 37.9
PGSC0003DMG400030506 Solanum tuberosum HOM05D002727 ORTHO05D002856 1.6e-09 67.4 132 37.9
Psat6g221920 Pisum sativum HOM05D002727 ORTHO05D002856 2.0e-09 67.0 135 34.1
HanXRQChr15g0488631 Helianthus annuus HOM05D002727 ORTHO05D002856 2.7e-09 66.6 131 35.9
Lsat_1_v5_gn_3_54560 Lactuca sativa HOM05D002727 ORTHO05D002856 3.5e-09 66.2 136 36.0
Prupe.1G322000 Prunus persica HOM05D002727 ORTHO05D002856 3.5e-09 66.2 136 36.8
Actinidia06457 Actinidia chinensis HOM05D013024 ORTHO05D057743 5.9e-09 65.5 151 33.8
Sed0024961 Sechium edule HOM05D002727 ORTHO05D002856 1.0e-08 64.7 133 31.6
CAN.G185.21 Capsicum annuum HOM05D002727 ORTHO05D002856 1.3e-08 64.3 153 32.7
FAN07G1376 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.3e-08 64.3 137 37.2
Ca_11101_v3 Cicer arietinum L. HOM05D002727 ORTHO05D002856 1.7e-08 63.9 134 33.6
Thecc.09G156100 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-08 63.9 163 34.4
Thecc.09G156700 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-08 63.9 181 30.9
Thecc.09G156800 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-08 63.9 163 34.4
Thecc.09G157300 Theobroma cacao HOM05D013024 ORTHO05D015548 1.7e-08 63.9 182 33.5
SGA_v2.0_scaffold170G38831 Striga asiatica HOM05D002727 ORTHO05D002856 2.3e-08 63.5 128 38.3
Nitab4.5_0006134g0020 Nicotiana tabacum HOM05D002727 ORTHO05D002856 2.9e-08 63.2 132 37.1
Thecc.09G156200 Theobroma cacao HOM05D013024 ORTHO05D015548 3.8e-08 62.8 193 31.6
Lalb_Chr17g0338701 Lupinus albus HOM05D002727 ORTHO05D002856 5.0e-08 62.4 139 33.8
Medtr1g108470 Medicago truncatula HOM05D002727 ORTHO05D002856 5.0e-08 62.4 135 33.3
Rhsim09G0100100 Rhododendron simsii HOM05D008460 ORTHO05D001602 5.0e-08 62.4 139 33.8
TWI56G0192 Tripterygium wilfordii HOM05D002727 ORTHO05D002856 8.6e-08 61.6 135 29.6
Ciclev10017720m.g Citrus clementina HOM05D002727 ORTHO05D002856 1.1e-07 61.2 133 34.6
Lsat_1_v5_gn_8_43200 Lactuca sativa HOM05D002727 ORTHO05D002856 1.1e-07 61.2 133 33.1
Thecc.09G157200 Theobroma cacao HOM05D013024 ORTHO05D015548 1.1e-07 61.2 167 34.1
VMungo0720G0381 Vigna mungo HOM05D002727 ORTHO05D002856 1.5e-07 60.8 118 34.7
Atru.chr6.2573 Acer truncatum HOM05D002727 ORTHO05D002856 1.9e-07 60.5 131 30.5
FAN24G3357 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.5e-07 60.1 136 33.8
unitig_26.g9076 Utricularia gibba HOM05D002727 ORTHO05D002856 2.5e-07 60.1 145 34.5
unitig_27.g25263 Utricularia gibba HOM05D002727 ORTHO05D002856 2.5e-07 60.1 128 38.3
CANSAT11G2620 Cannabis sativa HOM05D013024 ORTHO05D015548 3.3e-07 59.7 163 34.4
TPR.G4843 Trifolium pratense HOM05D002727 ORTHO05D002856 3.3e-07 59.7 135 32.6
Migut.E00413 Erythranthe guttata HOM05D002727 ORTHO05D002856 4.3e-07 59.3 128 35.2
vmacro10627 Vaccinium macrocarpon HOM05D002727 ORTHO05D002856 4.3e-07 59.3 153 32.0
FvH4_2g32760 Fragaria vesca HOM05D002727 ORTHO05D002856 5.6e-07 58.9 136 33.8
Oeu044348.1 Olea europaea HOM05D002727 ORTHO05D002856 5.6e-07 58.9 136 34.6
Sabra08G0096800 Salix brachista HOM05D002727 ORTHO05D002856 5.6e-07 58.9 132 34.8
Haze_11036 Corylus avellana HOM05D002727 ORTHO05D002856 7.3e-07 58.5 133 33.8
FAN15G1981 Fragaria x ananassa HOM05D002727 ORTHO05D002856 7.3e-07 58.5 129 38.0
MD09G1010600 Malus domestica HOM05D002727 ORTHO05D002856 7.3e-07 58.5 134 35.8
Sabra17G0092700 Salix brachista HOM05D002727 ORTHO05D002856 9.5e-07 58.2 131 32.8
FAN18G1847 Fragaria x ananassa HOM05D002727 ORTHO05D002856 1.2e-06 57.8 127 32.3
Cfa008577 Carpinus fangiana HOM05D002727 ORTHO05D002856 2.1e-06 57.0 134 32.1
FAN27G2751 Fragaria x ananassa HOM05D002727 ORTHO05D002856 2.8e-06 56.6 111 38.7
Sc18g0004340 Simmondsia chinensis HOM05D002727 ORTHO05D002856 3.6e-06 56.2 129 32.6
CANSAT21G1445 Cannabis sativa HOM05D013024 ORTHO05D015548 6.1e-06 55.5 114 35.1


User provided reference genes

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