Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02219 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.3e-108 396.4 190 100.0
Aqoxy7G00268 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 7.1e-43 177.9 136 61.0
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 1.3e-39 167.2 137 59.1
Actinidia21593 Actinidia chinensis HOM05D000462 ORTHO05D005846 1.4e-38 163.7 137 57.7
Haze_03590 Corylus avellana HOM05D000462 ORTHO05D005846 5.3e-38 161.8 138 56.5
Cfa010675 Carpinus fangiana HOM05D000462 ORTHO05D005846 9.0e-38 161.0 138 56.5
CSS0023532 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 4.5e-37 158.7 137 60.6
Hma1.2p1_0353F.1_g133250 Hydrangea macrophylla HOM05D000462 ORTHO05D005846 7.1e-35 151.4 137 54.7
Atru.chr2.1657 Acer truncatum HOM05D000462 ORTHO05D005846 1.2e-34 150.6 146 49.3
GSVIVG01019293001 Vitis vinifera HOM05D000462 ORTHO05D005846 1.6e-34 150.2 145 54.5
Rhsim07G0047200 Rhododendron simsii HOM05D000462 ORTHO05D005846 4.6e-34 148.7 153 50.3
Rhsim07G0047100 Rhododendron simsii HOM05D000462 ORTHO05D005846 1.0e-33 147.5 136 56.6
MD07G1080300 Malus domestica HOM05D000462 ORTHO05D005846 2.3e-33 146.4 148 51.4
TAR374G1078 Trochodendron aralioides HOM05D000462 ORTHO05D005846 3.0e-33 146.0 195 44.6
Aqoxy3G00515 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 8.7e-33 144.4 141 53.2
CSS0047566 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 1.3e-31 140.6 149 51.0
Prupe.2G100300 Prunus persica HOM05D000462 ORTHO05D005846 2.8e-31 139.4 134 53.0
CSS0030224 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D005846 3.7e-31 139.0 149 51.0
PSO063G2746 Papaver somniferum HOM05D000462 ORTHO05D005846 6.3e-31 138.3 132 51.5
MD02G1233300 Malus domestica HOM05D000462 ORTHO05D005846 1.1e-30 137.5 142 49.3
PSO782G4146 Papaver somniferum HOM05D000462 ORTHO05D005846 1.4e-30 137.1 150 46.7
PSO017G2480 Papaver somniferum HOM05D000462 ORTHO05D005846 1.8e-30 136.7 153 43.8
Prupe.2G104700 Prunus persica HOM05D000462 ORTHO05D005846 3.1e-30 136.0 134 51.5
PGSC0003DMG400042622 Solanum tuberosum HOM05D000462 ORTHO05D005846 5.3e-30 135.2 136 50.7
AUR62031622 Chenopodium quinoa HOM05D000462 ORTHO05D005846 2.6e-29 132.9 139 50.4
Nn1g09754 Nelumbo nucifera HOM05D000462 ORTHO05D005846 2.6e-29 132.9 135 49.6
Nn3g19412 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.4e-29 132.5 178 40.4
Nn3g19417 Nelumbo nucifera HOM05D000462 ORTHO05D005846 3.4e-29 132.5 152 46.1
RcHm_v2.0_Chr2g0147401 Rosa chinensis HOM05D000462 ORTHO05D005846 2.2e-28 129.8 136 47.1
EL10Ac4g07924 Beta vulgaris HOM05D000462 ORTHO05D005846 5.0e-28 128.6 134 50.0
PSO478G1321 Papaver somniferum HOM05D000462 ORTHO05D005846 5.0e-28 128.6 153 40.5
Hund26858 Selenicereus undatus HOM05D000462 ORTHO05D005846 5.0e-28 128.6 135 51.9
AUR62020515 Chenopodium quinoa HOM05D000462 ORTHO05D005846 8.4e-28 127.9 139 48.9
DCAR_029565 Daucus carota HOM05D000462 ORTHO05D005846 8.4e-28 127.9 135 51.1
FAN03G2319 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.1e-27 127.5 164 43.9
FvH4_6g35581 Fragaria vesca HOM05D000462 ORTHO05D005846 1.9e-27 126.7 129 48.1
FAN06G2574 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.9e-27 126.7 137 47.4
MELO3C006216.2 Cucumis melo HOM05D000462 ORTHO05D005846 2.5e-27 126.3 147 47.6
Migut.N01674 Erythranthe guttata HOM05D000462 ORTHO05D005846 2.5e-27 126.3 134 48.5
ClCG05G002510 Citrullus lanatus HOM05D000462 ORTHO05D005846 4.2e-27 125.6 161 44.7
Eucgr.E01753 Eucalyptus grandis HOM05D000462 ORTHO05D005846 4.2e-27 125.6 142 44.4
Peaxi162Scf00907g00221 Petunia axillaris HOM05D000462 ORTHO05D005846 4.2e-27 125.6 142 47.9
FvH4_7g07720 Fragaria vesca HOM05D000462 ORTHO05D005846 7.2e-27 124.8 136 47.1
Prupe.2G104300 Prunus persica HOM05D000462 ORTHO05D005846 7.2e-27 124.8 148 45.9
CiPaw.13G054400 Carya illinoinensis HOM05D000462 ORTHO05D005846 9.3e-27 124.4 148 43.9
FAN10G1386 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.6e-26 123.6 146 46.6
RcHm_v2.0_Chr2g0147411 Rosa chinensis HOM05D000462 ORTHO05D005846 1.6e-26 123.6 135 48.9
DCAR_029566 Daucus carota HOM05D000462 ORTHO05D005846 2.1e-26 123.2 134 49.3
CsaV3_3G009950 Cucumis sativus L. HOM05D000462 ORTHO05D005846 7.9e-26 121.3 147 46.9
EL10Ac4g07923 Beta vulgaris HOM05D000462 ORTHO05D005846 1.3e-25 120.6 158 43.7
DCAR_029563 Daucus carota HOM05D000462 ORTHO05D005846 1.3e-25 120.6 131 48.1
Sed0009318 Sechium edule HOM05D000462 ORTHO05D005846 1.8e-25 120.2 144 44.4
FvH4_6g35582 Fragaria vesca HOM05D000462 ORTHO05D005846 3.9e-25 119.0 133 45.1
vmacro13593 Vaccinium macrocarpon HOM05D000462 ORTHO05D005846 3.9e-25 119.0 136 47.8
PGSC0003DMG400001798 Solanum tuberosum HOM05D000462 ORTHO05D005846 6.7e-25 118.2 136 50.7
PGSC0003DMG400020979 Solanum tuberosum HOM05D000462 ORTHO05D005846 6.7e-25 118.2 136 50.7
Migut.N01672 Erythranthe guttata HOM05D000462 ORTHO05D005846 8.7e-25 117.9 137 46.0
Solyc01g081400.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 8.7e-25 117.9 159 46.5
Solyc01g150140.1 Solanum lycopersicum HOM05D000462 ORTHO05D005846 8.7e-25 117.9 124 50.0
Sopen01g032970 Solanum pennellii HOM05D000462 ORTHO05D005846 8.7e-25 117.9 159 46.5
Ciclev10033936m.g Citrus clementina HOM05D000462 ORTHO05D005846 1.5e-24 117.1 103 52.4
FAN14G2914 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.5e-24 117.1 133 44.4
Sc02g0004850 Simmondsia chinensis HOM05D000462 ORTHO05D005846 1.5e-24 117.1 108 52.8
Aqoxy2G03796 Aquilegia oxysepala HOM05D000462 ORTHO05D005846 1.9e-24 116.7 121 52.1
RcHm_v2.0_Chr1g0342371 Rosa chinensis HOM05D000462 ORTHO05D005846 1.9e-24 116.7 135 47.4
CAN.G992.17 Capsicum annuum HOM05D000462 ORTHO05D005846 3.3e-24 115.9 133 47.4
Sopen01g026530 Solanum pennellii HOM05D000462 ORTHO05D005846 4.3e-24 115.5 118 53.4
Nitab4.5_0000792g0060 Nicotiana tabacum HOM05D000462 ORTHO05D005846 7.4e-24 114.8 152 44.1
RcHm_v2.0_Chr1g0342491 Rosa chinensis HOM05D000462 ORTHO05D005846 7.4e-24 114.8 136 43.4
Cc08_g05580 Coffea canephora HOM05D000462 ORTHO05D005846 1.3e-23 114.0 167 39.5
Sed0002685 Sechium edule HOM05D000462 ORTHO05D005846 1.3e-23 114.0 138 46.4
Zm00001eb421100 Zea mays HOM05D000462 ORTHO05D005846 1.6e-23 113.6 122 42.6
MSTRG.17069 Avicennia marina HOM05D000462 ORTHO05D005846 2.2e-23 113.2 166 41.0
Cc00_g12640 Coffea canephora HOM05D000462 ORTHO05D005846 2.2e-23 113.2 183 36.6
Peaxi162Scf00907g00226 Petunia axillaris HOM05D000462 ORTHO05D005846 2.2e-23 113.2 159 41.5
RcHm_v2.0_Chr1g0342401 Rosa chinensis HOM05D000462 ORTHO05D005846 2.2e-23 113.2 137 43.1
ClCG05G011530 Citrullus lanatus HOM05D000462 ORTHO05D005846 4.8e-23 112.1 121 45.5
AUR62015684 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.4e-22 110.5 133 48.1
Cc08_g05570 Coffea canephora HOM05D000462 ORTHO05D005846 1.4e-22 110.5 145 43.4
CAN.G206.135 Capsicum annuum HOM05D000462 ORTHO05D005846 1.8e-22 110.2 138 43.5
Lsat_1_v5_gn_5_59060 Lactuca sativa HOM05D000462 ORTHO05D005846 1.8e-22 110.2 134 44.0
Nitab4.5_0003123g0040 Nicotiana tabacum HOM05D000462 ORTHO05D011162 2.4e-22 109.8 130 45.4
ECA240G2690 Erigeron canadensis HOM05D000462 ORTHO05D005846 3.1e-22 109.4 155 37.4
PGR042G2077 Punica granatum HOM05D000462 ORTHO05D005846 3.1e-22 109.4 125 44.8
AUR62020518 Chenopodium quinoa HOM05D000462 ORTHO05D005846 6.9e-22 108.2 133 45.9
HPP92_014959 Vanilla planifolia HOM05D000462 ORTHO05D005846 2.0e-21 106.7 192 37.5
Peaxi162Scf00245g00411 Petunia axillaris HOM05D000462 ORTHO05D005846 2.6e-21 106.3 127 50.4
AUR62015689 Chenopodium quinoa HOM05D000462 ORTHO05D005846 4.5e-21 105.5 96 50.0
Migut.N01673 Erythranthe guttata HOM05D000462 ORTHO05D005846 5.9e-21 105.1 135 42.2
AUR62031619 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.3e-20 104.0 133 44.4
HanXRQChr13g0411631 Helianthus annuus HOM05D000462 ORTHO05D005846 1.3e-20 104.0 151 39.1
AUR62031621 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.7e-20 103.6 96 49.0
Lsat_1_v5_gn_7_33120 Lactuca sativa HOM05D000462 ORTHO05D005846 3.8e-20 102.4 135 42.2
SalBow4G1864 Salvia bowleyana HOM05D000462 ORTHO05D005846 3.8e-20 102.4 126 44.4
SalBow4G3150 Salvia bowleyana HOM05D000462 ORTHO05D005846 3.8e-20 102.4 126 44.4
arahy.Tifrunner.gnm1.ann1.XCU387 Arachis hypogaea HOM05D000462 ORTHO05D005846 5.0e-20 102.1 125 43.2
arahy.Tifrunner.gnm1.ann1.ES60GW Arachis hypogaea HOM05D000462 ORTHO05D005846 6.5e-20 101.7 129 42.6
Cc08_g05560 Coffea canephora HOM05D000462 ORTHO05D005846 8.5e-20 101.3 180 37.2
Solyc07g017470.3 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.1e-19 100.9 98 51.0
Os04g0386900 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 1.4e-19 100.5 153 34.6
Phvul.002G100800 Phaseolus vulgaris HOM05D000462 ORTHO05D005846 1.4e-19 100.5 140 36.4
FAN14G3081 Fragaria x ananassa HOM05D000462 ORTHO05D005846 4.2e-19 99.0 100 46.0
CANSAT78G2521 Cannabis sativa HOM05D000462 ORTHO05D005846 1.6e-18 97.1 108 46.3
SalBow4G2124 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.1e-18 96.7 133 41.4
SalBow4G2827 Salvia bowleyana HOM05D000462 ORTHO05D005846 2.7e-18 96.3 133 41.4
VMungo0251G1006 Vigna mungo HOM05D000462 ORTHO05D005846 7.9e-18 94.7 144 37.5
ECA236G1772 Erigeron canadensis HOM05D000462 ORTHO05D005846 1.0e-17 94.4 125 41.6
Lalb_Chr09g0328911 Lupinus albus HOM05D000462 ORTHO05D005846 1.4e-17 94.0 121 44.6
TPR.G34026 Trifolium pratense HOM05D000462 ORTHO05D005846 1.8e-17 93.6 126 42.9
arahy.Tifrunner.gnm1.ann1.L6NMZX Arachis hypogaea HOM05D000462 ORTHO05D005846 5.1e-17 92.0 151 40.4
CAN.G992.16 Capsicum annuum HOM05D000462 ORTHO05D005846 6.7e-17 91.7 99 50.5
Cpa.g.sc73.65 Carica papaya HOM05D000462 ORTHO05D005846 1.1e-16 90.9 96 42.7
SalBow4G0191 Salvia bowleyana HOM05D009568 ORTHO05D011026 1.5e-16 90.5 101 44.6
unitig_26.g8840 Utricularia gibba HOM05D000462 ORTHO05D005846 1.5e-16 90.5 115 40.9
arahy.Tifrunner.gnm1.ann1.AX2FME Arachis hypogaea HOM05D000462 ORTHO05D005846 2.0e-16 90.1 150 40.0
SalBow4G0706 Salvia bowleyana HOM05D009568 ORTHO05D011026 2.0e-16 90.1 101 44.6
RcHm_v2.0_Chr1g0342511 Rosa chinensis HOM05D000462 ORTHO05D005846 4.3e-16 89.0 102 46.1
Medtr4g083390 Medicago truncatula HOM05D000462 ORTHO05D005846 5.7e-16 88.6 124 41.1
Nitab4.5_0006461g0020 Nicotiana tabacum HOM05D000462 ORTHO05D005846 5.7e-16 88.6 91 50.5
Psat7g132920 Pisum sativum HOM05D000462 ORTHO05D005846 9.7e-16 87.8 119 47.9
Peaxi162Scf00104g00047 Petunia axillaris HOM05D000462 ORTHO05D005846 1.3e-15 87.4 101 44.6
Nitab4.5_0000050g0130 Nicotiana tabacum HOM05D000462 ORTHO05D005846 2.8e-15 86.3 76 51.3
Os06g0112300 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D005846 4.8e-15 85.5 128 39.1
arahy.Tifrunner.gnm1.ann1.62DZ2D Arachis hypogaea HOM05D000462 ORTHO05D005846 8.2e-15 84.7 121 42.1
HanXRQChr01g0021801 Helianthus annuus HOM05D000462 ORTHO05D005846 8.2e-15 84.7 103 41.7
SGA_v2.0_scaffold4G02224 Striga asiatica HOM05D000462 ORTHO05D005846 8.2e-15 84.7 115 40.0
unitig_749.g14241 Utricularia gibba HOM05D000462 ORTHO05D005846 1.1e-14 84.3 112 36.6
Oeu039097.1 Olea europaea HOM05D000462 ORTHO05D005846 2.4e-14 83.2 138 34.1
Oeu013594.1 Olea europaea HOM05D000462 ORTHO05D005846 9.1e-14 81.3 132 33.3
SGA_v2.0_scaffold98G29378 Striga asiatica HOM05D000462 ORTHO05D005846 2.6e-13 79.7 128 35.2
Aqoxy5G02385 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 7.7e-13 78.2 140 35.7
FAN06G0093 Fragaria x ananassa HOM05D000462 ORTHO05D005846 1.0e-12 77.8 93 46.2
AUR62020516 Chenopodium quinoa HOM05D000462 ORTHO05D005846 1.3e-12 77.4 88 43.2
Glyma.07G224100 Glycine max HOM05D000462 ORTHO05D005846 1.7e-12 77.0 99 44.4
Ca_18787_v3 Cicer arietinum L. HOM05D000462 ORTHO05D005846 5.0e-12 75.5 84 52.4
QL11p039132 Quercus lobata HOM05D000823 ORTHO05D000088 5.0e-12 75.5 94 43.6
SalBow6G3582 Salvia bowleyana HOM05D000462 ORTHO05D005846 6.5e-12 75.1 133 33.1
Peaxi162Scf01016g00003 Petunia axillaris HOM05D000462 ORTHO05D005846 1.1e-11 74.3 99 39.4
FAN10G1699 Fragaria x ananassa HOM05D000462 ORTHO05D005846 2.1e-10 70.1 80 45.0
Aqoxy3G01422 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 3.6e-10 69.3 122 34.4
CDE03G0429 Ceratophyllum demersum HOM05D000462 ORTHO05D005846 6.1e-10 68.6 81 43.2
Solyc01g060370.2 Solanum lycopersicum HOM05D000462 ORTHO05D005846 1.0e-09 67.8 60 53.3
Cpa.g.c42681 Carica papaya HOM05D000462 ORTHO05D005846 1.4e-09 67.4 65 49.2
unitig_750.g28427 Utricularia gibba HOM05D000462 ORTHO05D005846 1.4e-09 67.4 185 31.4
Aqoxy5G02746 Aquilegia oxysepala HOM05D024176 ORTHO05D005846 2.0e-08 63.5 69 43.5
SEGI_02922 Sequoiadendron giganteum HOM05D000823 ORTHO05D005846 5.7e-08 62.0 101 39.6
PSO104G0153 Papaver somniferum HOM05D000838 ORTHO05D000656 2.2e-07 60.1 101 35.6
PSO017G0811 Papaver somniferum HOM05D000823 ORTHO05D000088 2.8e-07 59.7 106 32.1
SEGI_06639 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 3.7e-07 59.3 111 35.1
PSO170G5993 Papaver somniferum HOM05D000823 ORTHO05D000088 8.2e-07 58.2 106 31.1
FAN27G1265 Fragaria x ananassa HOM05D000823 ORTHO05D000088 1.1e-06 57.8 112 35.7
Cfa004943 Carpinus fangiana HOM05D001372 ORTHO05D002010 1.4e-06 57.4 139 28.1
PSO339G0204 Papaver somniferum HOM05D000395 ORTHO05D000088 1.4e-06 57.4 55 45.5
COL.COLO4_26809 Corchorus olitorius HOM05D000395 ORTHO05D000088 1.8e-06 57.0 99 34.3
QL06p036952 Quercus lobata HOM05D000395 ORTHO05D000088 1.8e-06 57.0 113 34.5
Ah.11g043200 Amaranthus hybridus HOM05D000823 ORTHO05D000088 2.4e-06 56.6 136 35.3
CANSAT01G1099 Cannabis sativa HOM05D000395 ORTHO05D000088 2.4e-06 56.6 65 43.1
CANSAT01G3239 Cannabis sativa HOM05D000395 ORTHO05D000088 3.1e-06 56.2 179 22.9
Hma1.2p1_0260F.1_g104520 Hydrangea macrophylla HOM05D000823 ORTHO05D000088 3.1e-06 56.2 116 37.1
HPP92_015720 Vanilla planifolia HOM05D000395 ORTHO05D000088 3.1e-06 56.2 99 36.4
HPP92_026640 Vanilla planifolia HOM05D000395 ORTHO05D000088 3.1e-06 56.2 99 36.4
CiPaw.02G012600 Carya illinoinensis HOM05D000395 ORTHO05D000088 4.1e-06 55.8 90 41.1
PSO541G4430 Papaver somniferum HOM05D000395 ORTHO05D000088 4.1e-06 55.8 89 32.6
Phvul.007G041900 Phaseolus vulgaris HOM05D000395 ORTHO05D000088 4.1e-06 55.8 154 27.9
Sc15g0006570 Simmondsia chinensis HOM05D000823 ORTHO05D000088 4.1e-06 55.8 83 42.2
AUR62017523 Chenopodium quinoa HOM05D000147 ORTHO05D005950 5.3e-06 55.5 126 28.6
Duzib248G0282 Durio zibethinus HOM05D000823 ORTHO05D009132 5.3e-06 55.5 83 38.6
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 5.3e-06 55.5 98 33.7
Lj5g0027331 Lotus japonicus HOM05D000823 ORTHO05D000088 5.3e-06 55.5 132 35.6
Atru.chr13.593 Acer truncatum HOM05D000823 ORTHO05D000088 7.0e-06 55.1 100 35.0
Duzib093G1908 Durio zibethinus HOM05D000823 ORTHO05D000088 7.0e-06 55.1 85 40.0
Potri.014G036800 Populus trichocarpa HOM05D000823 ORTHO05D000088 7.0e-06 55.1 100 38.0
SEGI_32289 Sequoiadendron giganteum HOM05D000823 ORTHO05D000088 7.0e-06 55.1 136 30.1
Thecc.01G047000 Theobroma cacao HOM05D000395 ORTHO05D000088 7.0e-06 55.1 108 29.6
Medtr1g021440 Medicago truncatula HOM05D000823 ORTHO05D000088 9.1e-06 54.7 166 29.5
Solyc04g079590.3 Solanum lycopersicum HOM05D000823 ORTHO05D000088 9.1e-06 54.7 116 34.5
Sopen04g033170 Solanum pennellii HOM05D000823 ORTHO05D000088 9.1e-06 54.7 116 34.5


User provided reference genes

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