Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.0e-119 433.7 264 100.0
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 2.3e-60 236.5 264 50.0
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 6.8e-60 235.0 264 59.8
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 8.6e-55 218.0 267 48.7
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 2.0e-51 206.8 176 60.2
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.0e-47 194.5 194 54.1
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 6.6e-47 191.8 184 53.8
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 1.5e-46 190.7 175 58.9
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 1.9e-46 190.3 187 53.5
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 2.5e-46 189.9 178 53.9
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 2.5e-46 189.9 246 43.5
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 1.2e-45 187.6 173 56.1
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 1.2e-45 187.6 179 52.5
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 2.1e-45 186.8 185 55.1
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 2.8e-45 186.4 178 52.2
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 2.8e-45 186.4 271 41.3
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 8.1e-45 184.9 271 41.3
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 1.4e-44 184.1 175 54.9
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.4e-44 184.1 173 58.4
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.4e-44 184.1 187 52.9
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 2.4e-44 183.3 185 52.4
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.1e-44 183.0 185 52.4
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 3.1e-44 183.0 182 51.1
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 3.1e-44 183.0 181 54.1
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 4.0e-44 182.6 180 56.7
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 4.0e-44 182.6 169 53.8
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 1.2e-43 181.0 164 55.5
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.5e-43 180.6 184 52.7
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.5e-43 180.6 178 51.1
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 2.0e-43 180.3 180 55.0
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 2.6e-43 179.9 188 52.7
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 4.4e-43 179.1 187 50.8
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 7.6e-43 178.3 182 54.9
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 9.9e-43 177.9 168 52.4
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 1.3e-42 177.6 258 43.8
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 3.8e-42 176.0 182 53.8
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 4.9e-42 175.6 153 55.6
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 8.4e-42 174.9 182 52.7
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.4e-41 174.1 160 55.6
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 2.4e-41 173.3 183 53.6
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 3.2e-41 172.9 175 52.6
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 3.2e-41 172.9 173 51.4
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 5.4e-41 172.2 153 54.9
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 9.3e-41 171.4 174 52.9
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 1.6e-40 170.6 159 56.0
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 2.1e-40 170.2 156 55.1
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 2.1e-40 170.2 177 50.8
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 2.1e-40 170.2 149 58.4
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 2.7e-40 169.9 155 56.1
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 4.6e-40 169.1 176 50.0
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 1.3e-39 167.5 176 49.4
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 8.7e-39 164.9 179 46.9
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 1.5e-38 164.1 175 52.0
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 1.9e-38 163.7 151 51.0
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 4.3e-38 162.5 272 37.5
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 2.4e-36 156.8 155 52.9
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 4.0e-36 156.0 148 52.7
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 4.0e-36 156.0 185 47.6
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 6.9e-36 155.2 185 47.6
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.0e-35 153.7 159 50.9
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 3.4e-35 152.9 183 45.4
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 3.4e-35 152.9 177 47.5
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 5.8e-35 152.1 183 46.4
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 1.3e-34 151.0 180 48.3
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 2.9e-34 149.8 138 58.7
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 8.4e-34 148.3 153 51.0
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 1.9e-33 147.1 153 51.6
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 2.4e-33 146.7 161 49.1
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 2.4e-33 146.7 264 41.7
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.4e-33 145.6 184 45.7
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.4e-33 145.6 184 45.7
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 5.4e-33 145.6 183 46.4
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 7.1e-33 145.2 154 50.6
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 9.3e-33 144.8 184 45.7
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 4.6e-32 142.5 184 44.6
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 8.7e-31 138.3 163 42.9
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.9e-30 137.1 113 56.6
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.3e-30 136.0 121 56.2
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 6.2e-29 132.1 197 44.2
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 4.5e-27 125.9 182 38.5
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 5.8e-27 125.6 187 35.3
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 6.4e-26 122.1 153 39.2
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 8.4e-26 121.7 174 36.8
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 1.1e-25 121.3 181 38.1
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 3.2e-25 119.8 150 40.7
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.2e-25 119.8 159 40.9
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 3.2e-25 119.8 181 37.6
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 4.2e-25 119.4 151 39.1
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 9.3e-25 118.2 175 40.6
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 9.3e-25 118.2 154 37.7
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.6e-24 117.5 174 36.8
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 3.5e-24 116.3 150 38.7
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 4.6e-24 115.9 151 37.7
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 4.6e-24 115.9 152 38.2
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 6.0e-24 115.5 177 33.3
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 6.0e-24 115.5 177 33.3
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 6.0e-24 115.5 128 42.2
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 7.9e-24 115.2 175 38.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 7.9e-24 115.2 155 38.7
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 1.0e-23 114.8 153 37.3
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 1.8e-23 114.0 101 57.4
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.9e-23 112.8 150 37.3
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 6.7e-23 112.1 153 35.3
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.5e-22 110.9 128 42.2
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 7.4e-22 108.6 155 34.2
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 7.4e-22 108.6 156 35.9
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 9.6e-22 108.2 155 36.8
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 9.6e-22 108.2 145 37.9
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.3e-21 107.8 159 35.2
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 2.8e-21 106.7 134 38.1
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 2.8e-21 106.7 170 37.1
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 8.1e-21 105.1 128 38.3
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-20 104.8 159 34.0
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 1.1e-20 104.8 179 32.4
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 1.1e-20 104.8 179 32.4
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.4e-20 104.4 174 34.5
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 1.4e-20 104.4 159 34.0
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.4e-20 104.4 174 34.5
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 2.4e-20 103.6 174 33.9
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 2.4e-20 103.6 174 33.9
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 2.4e-20 103.6 134 38.1
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 3.1e-20 103.2 174 33.9
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 9.0e-20 101.7 134 38.1
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 1.5e-19 100.9 134 37.3
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 2.0e-19 100.5 150 37.3
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 2.6e-19 100.1 116 40.5
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 3.4e-19 99.8 165 36.4
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 3.4e-19 99.8 121 38.0
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 4.5e-19 99.4 140 37.9
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 5.8e-19 99.0 132 35.6
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.0e-18 98.2 153 35.9
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.0e-18 98.2 166 31.9
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 1.0e-18 98.2 190 33.2
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.7e-18 97.4 157 35.7
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 1.7e-18 97.4 135 40.7
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 2.2e-18 97.1 191 32.5
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 2.9e-18 96.7 156 35.9
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 3.8e-18 96.3 137 37.2
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 3.8e-18 96.3 152 34.9
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 8.4e-18 95.1 155 32.9
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 8.4e-18 95.1 137 33.6
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 8.4e-18 95.1 171 32.7
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 3.2e-17 93.2 122 35.2
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 4.2e-17 92.8 127 37.0
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 5.5e-17 92.4 77 59.7
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 7.1e-17 92.0 121 36.4
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 9.3e-17 91.7 154 34.4
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.6e-16 90.9 177 32.8
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.6e-16 90.9 168 33.9
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 6.0e-16 89.0 93 43.0
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 1.3e-15 87.8 118 34.7
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 1.6e-13 80.9 90 41.1
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.8e-13 80.1 112 36.6
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 2.4e-12 77.0 91 39.6
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 9.0e-12 75.1 82 51.2
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 1.5e-11 74.3 107 36.4
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 5.9e-11 72.4 119 37.0
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 6.5e-10 68.9 117 30.8
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 3.6e-08 63.2 59 45.8
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 4.6e-08 62.8 120 31.7
PSO782G2497 Papaver somniferum HOM05D005423 ORTHO05D006223 3.9e-07 59.7 123 30.9


User provided reference genes

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