Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02158 Aquilegia oxysepala HOM05D006678 ORTHO05D008388 2.9e-61 238.4 125 100.0
Duzib106G0454 Durio zibethinus HOM05D006678 ORTHO05D008388 4.8e-40 167.9 78 94.9
Duzib177G0619 Durio zibethinus HOM05D006678 ORTHO05D008388 4.8e-40 167.9 90 86.7
Gohir.D13G161000 Gossypium hirsutum HOM05D006678 ORTHO05D008388 4.8e-40 167.9 90 86.7
Gorai.013G181600 Gossypium raimondii HOM05D006678 ORTHO05D008388 4.8e-40 167.9 90 86.7
Manes.09G127100 Manihot esculenta HOM05D006678 ORTHO05D008388 4.8e-40 167.9 90 86.7
Thecc.05G213400 Theobroma cacao HOM05D006678 ORTHO05D008388 6.3e-40 167.5 90 86.7
PSO063G3868 Papaver somniferum HOM05D006678 ORTHO05D008388 8.3e-40 167.2 123 69.1
Lj3g0002487 Lotus japonicus HOM05D006678 ORTHO05D008388 1.1e-39 166.8 90 86.7
Phvul.011G020300 Phaseolus vulgaris HOM05D006678 ORTHO05D008388 1.1e-39 166.8 90 86.7
GSVIVG01024408001 Vitis vinifera HOM05D006678 ORTHO05D008388 1.1e-39 166.8 117 72.6
VMungo1127G1968 Vigna mungo HOM05D006678 ORTHO05D008388 1.4e-39 166.4 90 86.7
Gohir.A13G156100 Gossypium hirsutum HOM05D006678 ORTHO05D008388 1.8e-39 166.0 90 85.6
Nn1g01909 Nelumbo nucifera HOM05D006678 ORTHO05D008388 1.8e-39 166.0 122 68.9
PSO782G5154 Papaver somniferum HOM05D006678 ORTHO05D008388 1.8e-39 166.0 123 68.3
TWI38G1314 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 1.8e-39 166.0 90 86.7
TWI39G0757 Tripterygium wilfordii HOM05D006678 ORTHO05D008388 3.1e-39 165.2 90 85.6
Atru.chr12.1964 Acer truncatum HOM05D006678 ORTHO05D008388 4.1e-39 164.9 75 96.0
Ciclev10023015m.g Citrus clementina HOM05D006678 ORTHO05D008388 9.1e-39 163.7 81 91.4
FAN03G1679 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.2e-38 163.3 93 82.8
MD01G1236000 Malus domestica HOM05D006678 ORTHO05D008388 1.2e-38 163.3 90 86.7
Nitab4.5_0000021g0500 Nicotiana tabacum HOM05D006678 ORTHO05D008388 1.6e-38 162.9 122 65.6
Peaxi162Scf00133g00723 Petunia axillaris HOM05D006678 ORTHO05D008388 1.6e-38 162.9 122 63.9
CANSAT21G1467 Cannabis sativa HOM05D006678 ORTHO05D008388 2.0e-38 162.5 77 90.9
Lalb_Chr01g0000921 Lupinus albus HOM05D006678 ORTHO05D008388 2.0e-38 162.5 90 84.4
Prupe.2G326100 Prunus persica HOM05D006678 ORTHO05D008388 2.0e-38 162.5 89 86.5
RcHm_v2.0_Chr1g0384211 Rosa chinensis HOM05D006678 ORTHO05D008388 2.7e-38 162.2 76 94.7
Ca_04918_v3 Cicer arietinum L. HOM05D006678 ORTHO05D008388 3.5e-38 161.8 90 83.3
Glyma.11G091800 Glycine max HOM05D006678 ORTHO05D008388 3.5e-38 161.8 90 84.4
Medtr4g077807 Medicago truncatula HOM05D006678 ORTHO05D008388 3.5e-38 161.8 90 83.3
Psat7g171800 Pisum sativum HOM05D006678 ORTHO05D008388 3.5e-38 161.8 112 68.8
Potri.013G082100 Populus trichocarpa HOM05D006678 ORTHO05D008388 3.5e-38 161.8 77 92.2
COL.COLO4_11805 Corchorus olitorius HOM05D006678 ORTHO05D008388 4.5e-38 161.4 90 83.3
THA.LOC104827215 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 4.5e-38 161.4 78 92.3
TAR629G1392 Trochodendron aralioides HOM05D006678 ORTHO05D008388 4.5e-38 161.4 121 69.4
FvH4_7g33980 Fragaria vesca HOM05D006678 ORTHO05D008388 7.7e-38 160.6 93 81.7
Lalb_Chr03g0024411 Lupinus albus HOM05D006678 ORTHO05D008388 7.7e-38 160.6 90 82.2
QL09p024031 Quercus lobata HOM05D006678 ORTHO05D008388 7.7e-38 160.6 89 83.1
PGR042G1336 Punica granatum HOM05D006678 ORTHO05D008388 1.0e-37 160.2 90 82.2
THA.LOC104802920 Tarenaya hassleriana HOM05D006678 ORTHO05D008388 1.0e-37 160.2 78 91.0
CiPaw.06G032600 Carya illinoinensis HOM05D006678 ORTHO05D008388 1.3e-37 159.8 76 92.1
FAN10G1380 Fragaria x ananassa HOM05D006678 ORTHO05D008388 1.3e-37 159.8 93 80.6
Sed0006085 Sechium edule HOM05D006678 ORTHO05D008388 1.7e-37 159.5 80 90.0
TPR.G27187 Trifolium pratense HOM05D006678 ORTHO05D008388 1.7e-37 159.5 112 67.9
MELO3C024729.2 Cucumis melo HOM05D006678 ORTHO05D008388 2.3e-37 159.1 90 82.2
Glyma.12G017800 Glycine max HOM05D006678 ORTHO05D008388 2.3e-37 159.1 76 93.4
Oeu031704.1 Olea europaea HOM05D006678 ORTHO05D008388 2.9e-37 158.7 75 93.3
ClCG02G007680 Citrullus lanatus HOM05D006678 ORTHO05D008388 3.8e-37 158.3 77 89.6
FAN01G1466 Fragaria x ananassa HOM05D006678 ORTHO05D008388 3.8e-37 158.3 93 80.6
Actinidia34306 Actinidia chinensis HOM05D006678 ORTHO05D008388 6.5e-37 157.5 121 62.8
Aa31LG5G13550 Aethionema arabicum HOM05D006678 ORTHO05D008388 6.5e-37 157.5 77 89.6
AT3G03070 Arabidopsis thaliana HOM05D006678 ORTHO05D008388 6.5e-37 157.5 77 89.6
CARHR077080 Cardamine hirsuta HOM05D006678 ORTHO05D008388 6.5e-37 157.5 77 89.6
Thhalv10021803m.g Eutrema salsugineum HOM05D006678 ORTHO05D008388 6.5e-37 157.5 77 89.6
Nitab4.5_0011186g0030 Nicotiana tabacum HOM05D006678 ORTHO05D008388 8.6e-37 157.1 122 63.1
Sp3g02110 Schrenkiella parvula HOM05D006678 ORTHO05D008388 8.6e-37 157.1 93 79.6
BcaB04g21385 Brassica carinata HOM05D006678 ORTHO05D008388 1.1e-36 156.8 82 85.4
Sabra13G0070800 Salix brachista HOM05D006678 ORTHO05D008388 1.5e-36 156.4 80 88.8
ATR0829G044 Amborella trichopoda HOM05D006678 ORTHO05D008388 1.9e-36 156.0 75 90.7
Actinidia18705 Actinidia chinensis HOM05D006678 ORTHO05D008388 2.5e-36 155.6 74 93.2
AL3G12580 Arabidopsis lyrata HOM05D006678 ORTHO05D008388 2.5e-36 155.6 77 88.3
BolC5t35043H Brassica oleracea HOM05D006678 ORTHO05D008388 2.5e-36 155.6 94 77.7
CDE06G2089 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 2.5e-36 155.6 79 86.1
Sopen03g027760 Solanum pennellii HOM05D006678 ORTHO05D008388 2.5e-36 155.6 125 61.6
Carub.0003s0222 Capsella rubella HOM05D006678 ORTHO05D008388 3.3e-36 155.2 77 88.3
Dinv17257 Davidia involucrata HOM05D006678 ORTHO05D008388 4.2e-36 154.8 123 62.6
Solyc03g097010.3 Solanum lycopersicum HOM05D006678 ORTHO05D008388 4.2e-36 154.8 125 61.6
arahy.Tifrunner.gnm1.ann1.Z69A25 Arachis hypogaea HOM05D006678 ORTHO05D008388 5.5e-36 154.5 76 90.8
CDE03G0140 Ceratophyllum demersum HOM05D006678 ORTHO05D008388 7.2e-36 154.1 80 85.0
CsaV3_2G036030 Cucumis sativus L. HOM05D006678 ORTHO05D008388 7.2e-36 154.1 90 80.0
HanXRQChr03g0088421 Helianthus annuus HOM05D006678 ORTHO05D008388 7.2e-36 154.1 74 90.5
SGA_v2.0_scaffold50G18440 Striga asiatica HOM05D006678 ORTHO05D008388 7.2e-36 154.1 75 90.7
C05p63740 Brassica napus HOM05D006678 ORTHO05D008388 9.5e-36 153.7 94 76.6
DCAR_009010 Daucus carota HOM05D006678 ORTHO05D008388 9.5e-36 153.7 126 62.7
Lsat_1_v5_gn_9_47480 Lactuca sativa HOM05D006678 ORTHO05D008388 9.5e-36 153.7 82 82.9
Dinv29159 Davidia involucrata HOM05D006678 ORTHO05D008388 1.2e-35 153.3 76 92.1
BNapus_Darmor_BZH_scaffold_129p00040 Brassica napus HOM05D006678 ORTHO05D008388 1.6e-35 152.9 77 85.7
BolC1t05850H Brassica oleracea HOM05D006678 ORTHO05D008388 1.6e-35 152.9 77 85.7
BraA01t04595Z Brassica rapa HOM05D006678 ORTHO05D008388 1.6e-35 152.9 77 85.7
A05p44110 Brassica napus HOM05D006678 ORTHO05D008388 2.8e-35 152.1 94 75.5
BraSC90t46700Z Brassica rapa HOM05D006678 ORTHO05D008388 2.8e-35 152.1 94 75.5
MSTRG.26930 Avicennia marina HOM05D006678 ORTHO05D008388 4.7e-35 151.4 87 78.2
CSS0016806 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 4.7e-35 151.4 74 90.5
Cc02_g00280 Coffea canephora HOM05D006678 ORTHO05D008388 4.7e-35 151.4 88 77.3
CSS0031072 Camellia sinensis var. sinensis HOM05D006678 ORTHO05D008388 6.1e-35 151.0 74 90.5
Migut.F00948 Erythranthe guttata HOM05D006678 ORTHO05D008388 8.0e-35 150.6 82 80.5
Hund09791 Selenicereus undatus HOM05D006678 ORTHO05D008388 8.0e-35 150.6 75 88.0
unitig_90.g27534 Utricularia gibba HOM05D006678 ORTHO05D008388 1.8e-34 149.4 75 86.7
Hma1.2p1_1680F.1_g297200 Hydrangea macrophylla HOM05D006678 ORTHO05D008388 2.3e-34 149.1 76 86.8
Rhsim03G0221400 Rhododendron simsii HOM05D006678 ORTHO05D008388 2.3e-34 149.1 83 79.5
Gorai.013G182200 Gossypium raimondii HOM05D006678 ORTHO05D008388 6.8e-34 147.5 90 77.8
Haze_00425 Corylus avellana HOM05D006877 ORTHO05D008735 1.7e-32 142.9 66 97.0
vmacro06510 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 6.3e-32 141.0 91 71.4
SalBow2G2234 Salvia bowleyana HOM05D006678 ORTHO05D008388 1.4e-31 139.8 82 73.2
EL10Ac3g05077 Beta vulgaris HOM05D006678 ORTHO05D008388 7.0e-31 137.5 74 83.8
CAN.G1131.11 Capsicum annuum HOM05D006678 ORTHO05D008388 1.6e-30 136.3 66 90.9
AUR62028176 Chenopodium quinoa HOM05D006678 ORTHO05D008388 4.5e-30 134.8 74 79.7
Oeu063732.2 Olea europaea HOM05D006678 ORTHO05D008388 4.5e-30 134.8 62 96.8
Duzib128G0155 Durio zibethinus HOM05D006678 ORTHO05D008388 5.9e-30 134.4 77 79.2
Os08g0161700 Oryza sativa ssp. japonica HOM05D006678 ORTHO05D008388 5.9e-30 134.4 85 70.6
vmacro22173 Vaccinium macrocarpon HOM05D006678 ORTHO05D008388 7.8e-30 134.0 64 93.8
AUR62002062 Chenopodium quinoa HOM05D006678 ORTHO05D008388 1.7e-29 132.9 74 79.7
Zm00001eb172200 Zea mays HOM05D006678 ORTHO05D008388 3.8e-29 131.7 81 72.8
Nitab4.5_0000011g0100 Nicotiana tabacum HOM05D006678 ORTHO05D008388 2.5e-28 129.0 65 89.2
AagrBONN_evm.TU.Sc2ySwM_368.1248 Anthoceros agrestis HOM05D006678 ORTHO05D008388 2.1e-27 125.9 78 67.9
SMO239G0055 Selaginella moellendorffii HOM05D006678 ORTHO05D008388 2.1e-27 125.9 72 73.6
SEGI_28569 Sequoiadendron giganteum HOM05D006678 ORTHO05D008388 1.4e-26 123.2 62 88.7
Mapoly0006s0269 Marchantia polymorpha HOM05D006678 ORTHO05D008388 4.0e-26 121.7 73 71.2
Pp3c24_2620 Physcomitrium patens HOM05D006678 ORTHO05D008388 4.0e-26 121.7 73 74.0
ECA232G0519 Erigeron canadensis HOM05D006678 ORTHO05D008388 2.0e-25 119.4 78 71.8
Ah.13g072760 Amaranthus hybridus HOM05D006678 ORTHO05D008388 1.3e-24 116.7 65 86.2
Pp3c23_13320 Physcomitrium patens HOM05D006678 ORTHO05D008388 2.7e-22 109.0 73 68.5
PRCOL_00006130 Prasinoderma coloniale HOM05D006678 ORTHO05D008388 2.8e-19 99.0 84 58.3
Cre03.g178250 Chlamydomonas reinhardtii HOM05D006678 ORTHO05D008388 1.2e-17 93.6 81 58.0
Gohir.D13G160300 Gossypium hirsutum HOM05D006678 ORTHO05D008388 3.2e-15 85.5 53 81.1
arahy.Tifrunner.gnm1.ann1.GV73NI Arachis hypogaea HOM05D006678 ORTHO05D008388 1.7e-13 79.7 39 94.9
Sc06g0002530 Simmondsia chinensis HOM05D002239 ORTHO05D002408 3.9e-13 78.6 39 89.7
Zm00001eb415610 Zea mays HOM05D006678 ORTHO05D008388 5.6e-12 74.7 38 84.2
CBR_g6679 Chara braunii HOM05D006678 ORTHO05D008388 4.4e-09 65.1 35 74.3


User provided reference genes

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