Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02089 Aquilegia oxysepala HOM05D006359 ORTHO05D007871 3.6e-96 354.8 162 100.0
TAR375G0743 Trochodendron aralioides HOM05D006359 ORTHO05D007871 1.4e-76 289.7 151 82.8
ATR0829G118 Amborella trichopoda HOM05D006359 ORTHO05D007871 3.2e-76 288.5 156 78.2
arahy.Tifrunner.gnm1.ann1.N39QDT Arachis hypogaea HOM05D006359 ORTHO05D007871 1.6e-75 286.2 152 79.6
TPR.G17376 Trifolium pratense HOM05D006359 ORTHO05D007871 2.1e-75 285.8 155 78.1
TPR.G779 Trifolium pratense HOM05D006359 ORTHO05D007871 2.1e-75 285.8 155 78.1
Sopen03g027690 Solanum pennellii HOM05D006359 ORTHO05D007871 2.7e-75 285.4 156 78.2
Ca_23151_v3 Cicer arietinum L. HOM05D006359 ORTHO05D007871 3.5e-75 285.0 155 78.7
CAN.G303.77 Capsicum annuum HOM05D006359 ORTHO05D007871 1.0e-74 283.5 156 78.2
HanXRQChr12g0381881 Helianthus annuus HOM05D006359 ORTHO05D007871 1.0e-74 283.5 156 77.6
Carub.0003s0225 Capsella rubella HOM05D006359 ORTHO05D007871 3.9e-74 281.6 157 79.6
CiPaw.06G019000 Carya illinoinensis HOM05D006359 ORTHO05D007871 3.9e-74 281.6 151 80.8
PGSC0003DMG402000567 Solanum tuberosum HOM05D006359 ORTHO05D007871 3.9e-74 281.6 156 77.6
Atru.chr12.1978 Acer truncatum HOM05D006359 ORTHO05D007871 6.6e-74 280.8 151 78.8
Medtr8g009960 Medicago truncatula HOM05D006359 ORTHO05D007871 1.1e-73 280.0 154 77.3
SalBow4G0660 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.1e-73 280.0 158 76.6
SalBow4G2166 Salvia bowleyana HOM05D006359 ORTHO05D007871 1.1e-73 280.0 158 76.6
AT3G03100 Arabidopsis thaliana HOM05D006359 ORTHO05D007871 1.5e-73 279.6 157 77.7
ECA246G3947 Erigeron canadensis HOM05D006359 ORTHO05D007871 1.5e-73 279.6 155 77.4
PSO782G4768 Papaver somniferum HOM05D006359 ORTHO05D007871 1.5e-73 279.6 151 81.5
arahy.Tifrunner.gnm1.ann1.K5IGPH Arachis hypogaea HOM05D006359 ORTHO05D007871 1.9e-73 279.3 152 77.6
TWI74G0194 Tripterygium wilfordii HOM05D006359 ORTHO05D007871 1.9e-73 279.3 154 77.3
CsaV3_5G005640 Cucumis sativus L. HOM05D006359 ORTHO05D007871 2.5e-73 278.9 157 76.4
Manes.08G162700 Manihot esculenta HOM05D006359 ORTHO05D007871 3.3e-73 278.5 151 78.8
CSS0011317 Camellia sinensis var. sinensis HOM05D006359 ORTHO05D007871 5.6e-73 277.7 153 78.4
Thhalv10021682m.g Eutrema salsugineum HOM05D006359 ORTHO05D007871 5.6e-73 277.7 157 77.1
PSO063G2711 Papaver somniferum HOM05D006359 ORTHO05D007871 5.6e-73 277.7 151 79.5
Phvul.002G039500 Phaseolus vulgaris HOM05D006359 ORTHO05D007871 5.6e-73 277.7 153 77.8
Sed0002409 Sechium edule HOM05D006359 ORTHO05D007871 5.6e-73 277.7 157 75.8
AL3G12700 Arabidopsis lyrata HOM05D006359 ORTHO05D007871 7.4e-73 277.3 157 77.1
Cpa.g.sc39.69 Carica papaya HOM05D006359 ORTHO05D007871 7.4e-73 277.3 155 75.5
Lj3g0004693 Lotus japonicus HOM05D006359 ORTHO05D007871 7.4e-73 277.3 157 75.8
SGA_v2.0_scaffold18G08507 Striga asiatica HOM05D006359 ORTHO05D007871 7.4e-73 277.3 154 76.6
Lsat_1_v5_gn_3_105561 Lactuca sativa HOM05D006359 ORTHO05D007871 1.3e-72 276.6 156 75.6
Aa31LG5G13580 Aethionema arabicum HOM05D006359 ORTHO05D007871 1.6e-72 276.2 157 75.2
CARHR077120 Cardamine hirsuta HOM05D006359 ORTHO05D007871 1.6e-72 276.2 157 76.4
MELO3C005389.2 Cucumis melo HOM05D006359 ORTHO05D007871 1.6e-72 276.2 157 75.2
Glyma.01G228400 Glycine max HOM05D006359 ORTHO05D007871 1.6e-72 276.2 153 75.8
Sp3g02140 Schrenkiella parvula HOM05D006359 ORTHO05D007871 1.6e-72 276.2 157 76.4
BolC1t05848H Brassica oleracea HOM05D006359 ORTHO05D007871 2.1e-72 275.8 157 76.4
BraA01t04593Z Brassica rapa HOM05D006359 ORTHO05D007871 2.1e-72 275.8 157 76.4
Sed0025211 Sechium edule HOM05D006359 ORTHO05D007871 2.1e-72 275.8 157 75.2
Migut.F00100 Erythranthe guttata HOM05D006359 ORTHO05D007871 3.6e-72 275.0 154 76.6
Glyma.11G011200 Glycine max HOM05D006359 ORTHO05D007871 4.8e-72 274.6 153 75.2
FvH4_7g33890 Fragaria vesca HOM05D006359 ORTHO05D007871 1.1e-71 273.5 158 74.7
Lalb_Chr05g0211271 Lupinus albus HOM05D006359 ORTHO05D007871 1.8e-71 272.7 153 77.1
CANSAT56G0993 Cannabis sativa HOM05D006359 ORTHO05D007871 3.1e-71 271.9 156 74.4
AUR62028171 Chenopodium quinoa HOM05D006359 ORTHO05D007871 5.3e-71 271.2 154 74.7
THA.LOC104827217 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 5.3e-71 271.2 151 76.2
A05p44080 Brassica napus HOM05D006359 ORTHO05D007871 6.9e-71 270.8 157 74.5
C05p63700 Brassica napus HOM05D006359 ORTHO05D007871 6.9e-71 270.8 157 74.5
BolC5t35039H Brassica oleracea HOM05D006359 ORTHO05D007871 6.9e-71 270.8 157 74.5
BraSC90t46703Z Brassica rapa HOM05D006359 ORTHO05D007871 6.9e-71 270.8 157 74.5
Gohir.D09G101400 Gossypium hirsutum HOM05D006359 ORTHO05D007871 6.9e-71 270.8 155 75.5
Gorai.006G118800 Gossypium raimondii HOM05D006359 ORTHO05D007871 6.9e-71 270.8 155 75.5
COL.COLO4_25307 Corchorus olitorius HOM05D006359 ORTHO05D007871 9.0e-71 270.4 152 76.3
PGR042G0220 Punica granatum HOM05D006359 ORTHO05D007871 9.0e-71 270.4 156 74.4
Gohir.A09G104700 Gossypium hirsutum HOM05D006359 ORTHO05D007871 1.2e-70 270.0 155 75.5
SGA_v2.0_scaffold44G16885 Striga asiatica HOM05D006359 ORTHO05D007871 1.2e-70 270.0 154 74.7
Cc02_g00330 Coffea canephora HOM05D006359 ORTHO05D007871 1.5e-70 269.6 151 76.2
Prupe.2G325400 Prunus persica HOM05D006359 ORTHO05D007871 1.5e-70 269.6 158 74.1
Cfa015873 Carpinus fangiana HOM05D006359 ORTHO05D007871 2.0e-70 269.2 155 74.8
Actinidia18703 Actinidia chinensis HOM05D006359 ORTHO05D007871 2.6e-70 268.9 154 72.7
Thecc.09G264700 Theobroma cacao HOM05D006359 ORTHO05D007871 2.6e-70 268.9 151 77.5
Eucgr.K00090 Eucalyptus grandis HOM05D006359 ORTHO05D007871 4.5e-70 268.1 156 72.4
MD01G1235400 Malus domestica HOM05D006359 ORTHO05D007871 4.5e-70 268.1 151 76.2
Potri.019G051400 Populus trichocarpa HOM05D006359 ORTHO05D007871 4.5e-70 268.1 157 75.2
RcHm_v2.0_Chr1g0384091 Rosa chinensis HOM05D006359 ORTHO05D007871 4.5e-70 268.1 158 74.1
Duzib168G1989 Durio zibethinus HOM05D006359 ORTHO05D007871 5.8e-70 267.7 155 74.8
THA.LOC104820881 Tarenaya hassleriana HOM05D006359 ORTHO05D007871 5.8e-70 267.7 151 75.5
GSVIVG01024414001 Vitis vinifera HOM05D006359 ORTHO05D007871 7.6e-70 267.3 155 74.2
arahy.Tifrunner.gnm1.ann1.0WZ6H1 Arachis hypogaea HOM05D006359 ORTHO05D007871 9.9e-70 266.9 164 70.7
EL10Ac3g05084 Beta vulgaris HOM05D006359 ORTHO05D007871 9.9e-70 266.9 154 74.7
Duzib150G0394 Durio zibethinus HOM05D006359 ORTHO05D007871 1.3e-69 266.5 155 74.8
unitig_0.g2431 Utricularia gibba HOM05D001194 ORTHO05D007871 1.3e-69 266.5 154 72.7
MD07G1308200 Malus domestica HOM05D006359 ORTHO05D007871 2.2e-69 265.8 156 72.4
Sabra19G0057200 Salix brachista HOM05D006359 ORTHO05D007871 2.2e-69 265.8 151 74.8
FAN03G1870 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.1e-68 263.5 158 72.8
Dinv29162 Davidia involucrata HOM05D006359 ORTHO05D007871 1.4e-68 263.1 148 75.7
QL09p024508 Quercus lobata HOM05D006359 ORTHO05D007871 9.3e-68 260.4 156 73.1
Ciclev10022653m.g Citrus clementina HOM05D006359 ORTHO05D007871 7.9e-67 257.3 151 72.8
Os10g0579300 Oryza sativa ssp. japonica HOM05D006359 ORTHO05D007871 2.3e-66 255.8 154 72.1
VMungo1215G3178 Vigna mungo HOM05D006359 ORTHO05D007871 3.0e-66 255.4 140 81.4
TPR.G4015 Trifolium pratense HOM05D006359 ORTHO05D007871 1.1e-65 253.4 155 70.3
Rhsim09G0212500 Rhododendron simsii HOM05D006359 ORTHO05D007871 1.5e-65 253.1 154 71.4
Zm00001eb025210 Zea mays HOM05D006359 ORTHO05D007871 1.9e-65 252.7 154 71.4
CDE02G3318 Ceratophyllum demersum HOM05D005498 ORTHO05D006719 3.3e-65 251.9 149 73.8
Peaxi162Scf00745g00854 Petunia axillaris HOM05D006359 ORTHO05D007871 3.3e-65 251.9 158 69.6
Sc13g0010840 Simmondsia chinensis HOM05D006359 ORTHO05D007871 2.8e-64 248.8 128 83.6
Zm00001eb224990 Zea mays HOM05D006359 ORTHO05D007871 4.8e-64 248.1 146 74.0
Hund09785 Selenicereus undatus HOM05D006359 ORTHO05D007871 6.2e-64 247.7 156 71.8
Nitab4.5_0000021g0410 Nicotiana tabacum HOM05D006359 ORTHO05D007871 8.1e-64 247.3 125 84.0
Nitab4.5_0011930g0020 Nicotiana tabacum HOM05D006359 ORTHO05D007871 1.4e-63 246.5 156 68.6
FAN03G2552 Fragaria x ananassa HOM05D006359 ORTHO05D007871 3.1e-63 245.4 165 68.5
vmacro10188 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 9.0e-63 243.8 124 83.9
Lj3A888T26 Lonicera japonica HOM05D006359 ORTHO05D007871 1.2e-62 243.4 119 87.4
AUR62002057 Chenopodium quinoa HOM05D006359 ORTHO05D007871 7.6e-62 240.7 154 67.5
FAN01G1102 Fragaria x ananassa HOM05D006359 ORTHO05D007871 7.6e-62 240.7 165 67.3
arahy.Tifrunner.gnm1.ann1.PN0BWC Arachis hypogaea HOM05D006359 ORTHO05D007871 7.4e-57 224.2 122 77.9
CDE11G0363 Ceratophyllum demersum HOM05D006359 ORTHO05D007871 1.6e-56 223.0 117 82.1
Haze_00616 Corylus avellana HOM05D006359 ORTHO05D007871 1.2e-54 216.9 155 64.5
HPP92_002578 Vanilla planifolia HOM05D006076 ORTHO05D007871 2.6e-54 215.7 122 74.6
BNapus_Darmor_BZH_scaffold_129p00020 Brassica napus HOM05D006359 ORTHO05D007871 2.5e-52 209.1 122 74.6
Mapoly0001s0046 Marchantia polymorpha HOM05D006359 ORTHO05D007871 5.5e-52 208.0 151 58.3
Gorai.009G080000 Gossypium raimondii HOM05D006359 ORTHO05D007871 2.1e-51 206.1 156 60.9
ClCG01G005390 Citrullus lanatus HOM05D006359 ORTHO05D007871 6.1e-51 204.5 118 77.1
FAN02G0767 Fragaria x ananassa HOM05D006359 ORTHO05D007871 6.1e-51 204.5 124 72.6
AagrBONN_evm.TU.Sc2ySwM_344.5152 Anthoceros agrestis HOM05D006359 ORTHO05D007871 5.1e-50 201.4 145 60.0
Pp3c16_5910 Physcomitrium patens HOM05D006359 ORTHO05D007871 7.4e-49 197.6 153 56.9
BcaB04g21383 Brassica carinata HOM05D006359 ORTHO05D007871 9.7e-49 197.2 122 73.0
Psat4g215600 Pisum sativum HOM05D006359 ORTHO05D007871 1.8e-47 193.0 106 78.3
HPP92_002576 Vanilla planifolia HOM05D004915 ORTHO05D006048 3.1e-47 192.2 95 86.3
FAN05G5659 Fragaria x ananassa HOM05D006359 ORTHO05D007871 1.0e-45 187.2 112 74.1
HPP92_002574 Vanilla planifolia HOM05D004915 ORTHO05D006048 2.7e-43 179.1 87 87.4
Nn1g01943 Nelumbo nucifera HOM05D006359 ORTHO05D007871 4.6e-43 178.3 109 72.5
CBR_g23185 Chara braunii HOM05D000019 ORTHO05D000002 2.2e-40 169.5 160 48.1
Gohir.A05G075800 Gossypium hirsutum HOM05D006359 ORTHO05D007871 4.8e-40 168.3 156 52.6
Hma1.2p1_0758F.1_g213680 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 2.6e-38 162.5 91 79.1
SMO331G0004 Selaginella moellendorffii HOM05D006359 ORTHO05D007871 3.8e-37 158.7 104 62.5
FAN10G1928 Fragaria x ananassa HOM05D006359 ORTHO05D007871 9.4e-36 154.1 106 69.8
Hma1.2p1_0758F.1_g213690 Hydrangea macrophylla HOM05D006359 ORTHO05D007871 1.7e-32 143.3 82 78.0
Actinidia33791 Actinidia chinensis HOM05D006359 ORTHO05D007871 1.3e-21 107.1 71 64.8
Gohir.D05G078700 Gossypium hirsutum HOM05D001598 ORTHO05D007192 9.4e-20 100.9 58 70.7
Cre11.g467767 Chlamydomonas reinhardtii HOM05D006359 ORTHO05D007871 1.4e-18 97.1 147 35.4
vmacro23522 Vaccinium macrocarpon HOM05D006359 ORTHO05D007871 4.4e-17 92.0 46 78.3
MCO08G302 Micromonas commoda HOM05D006359 ORTHO05D007871 1.2e-14 84.0 111 41.4
Haze_26508 Corylus avellana HOM05D006359 ORTHO05D007871 8.5e-13 77.8 112 42.9
PRCOL_00004481 Prasinoderma coloniale HOM05D006359 ORTHO05D007871 1.4e-10 70.5 124 37.1


User provided reference genes

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