Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02083 Aquilegia oxysepala HOM05D030856 ORTHO05D077796 5.1e-162 574.3 285 100.0
Aqoxy7G03012 Aquilegia oxysepala HOM05D030856 ORTHO05D077823 1.2e-14 84.7 133 41.4
Aqoxy1G02573 Aquilegia oxysepala HOM05D002921 ORTHO05D003258 1.0e-13 81.6 56 73.2
Aqoxy5G02811 Aquilegia oxysepala HOM05D030856 ORTHO05D077997 3.0e-13 80.1 132 40.2
Cc09_g04030 Coffea canephora HOM05D002921 ORTHO05D003258 4.0e-13 79.7 56 73.2
Manes.12G002200 Manihot esculenta HOM05D002921 ORTHO05D003258 6.8e-13 79.0 56 71.4
Manes.13G001600 Manihot esculenta HOM05D002921 ORTHO05D003258 1.2e-12 78.2 56 71.4
CSS0000382 Camellia sinensis var. sinensis HOM05D002921 ORTHO05D003258 1.5e-12 77.8 56 69.6
THA.LOC104821969 Tarenaya hassleriana HOM05D002921 ORTHO05D003258 1.5e-12 77.8 56 71.4
MBI12_g47648_MAGBIO Magnolia biondii HOM05D002921 ORTHO05D003258 2.0e-12 77.4 56 71.4
MD12G1262600 Malus domestica HOM05D002921 ORTHO05D003258 2.0e-12 77.4 56 71.4
Prupe.6G364400 Prunus persica HOM05D002921 ORTHO05D003258 2.0e-12 77.4 56 71.4
Thecc.05G188200 Theobroma cacao HOM05D002921 ORTHO05D003258 2.0e-12 77.4 56 69.6
CiPaw.07G083800 Carya illinoinensis HOM05D002921 ORTHO05D003258 2.6e-12 77.0 56 69.6
MD04G1247900 Malus domestica HOM05D002921 ORTHO05D003258 2.6e-12 77.0 56 69.6
TAR633G0717 Trochodendron aralioides HOM05D002921 ORTHO05D003258 2.6e-12 77.0 56 73.2
Hma1.2p1_2339F.1_g320270 Hydrangea macrophylla HOM05D002921 ORTHO05D003258 3.4e-12 76.6 56 69.6
Lj4g0016274 Lotus japonicus HOM05D002921 ORTHO05D003258 3.4e-12 76.6 56 69.6
PGR102G3352 Punica granatum HOM05D002921 ORTHO05D003258 3.4e-12 76.6 56 71.4
arahy.Tifrunner.gnm1.ann1.M2KELG Arachis hypogaea HOM05D002921 ORTHO05D003258 4.4e-12 76.3 56 67.9
arahy.Tifrunner.gnm1.ann1.USH98G Arachis hypogaea HOM05D002921 ORTHO05D003258 4.4e-12 76.3 56 67.9
Cpa.g.sc99.41 Carica papaya HOM05D002921 ORTHO05D003258 5.7e-12 75.9 56 69.6
Potri.008G076900 Populus trichocarpa HOM05D002921 ORTHO05D003258 7.5e-12 75.5 56 67.9
TWI36G0830 Tripterygium wilfordii HOM05D002921 ORTHO05D003258 7.5e-12 75.5 56 71.4
CARHR057080 Cardamine hirsuta HOM05D002921 ORTHO05D003258 9.7e-12 75.1 56 66.1
Duzib128G0346 Durio zibethinus HOM05D002921 ORTHO05D003258 9.7e-12 75.1 56 69.6
VMungo0251G0018 Vigna mungo HOM05D002921 ORTHO05D003258 9.7e-12 75.1 56 67.9
DCAR_002145 Daucus carota HOM05D000055 ORTHO05D003258 1.3e-11 74.7 56 71.4
Gohir.A02G106400 Gossypium hirsutum HOM05D002921 ORTHO05D003258 1.3e-11 74.7 56 69.6
Gorai.003G088400 Gossypium raimondii HOM05D002921 ORTHO05D003258 1.3e-11 74.7 56 69.6
QL10p015946 Quercus lobata HOM05D002921 ORTHO05D003258 1.3e-11 74.7 56 71.4
Atru.chr12.1673 Acer truncatum HOM05D002921 ORTHO05D003258 1.7e-11 74.3 57 70.2
Actinidia03248 Actinidia chinensis HOM05D002921 ORTHO05D003258 1.7e-11 74.3 56 66.1
MSTRG.9243 Avicennia marina HOM05D002921 ORTHO05D003258 1.7e-11 74.3 56 69.6
Ca_18381_v3 Cicer arietinum L. HOM05D002921 ORTHO05D003258 1.7e-11 74.3 56 67.9
CANSAT54G0399 Cannabis sativa HOM05D002921 ORTHO05D003258 2.2e-11 73.9 56 67.9
Eucgr.B01437 Eucalyptus grandis HOM05D002921 ORTHO05D003258 2.2e-11 73.9 56 67.9
Eucgr.K00008 Eucalyptus grandis HOM05D002921 ORTHO05D003258 2.2e-11 73.9 56 67.9
Lalb_Chr05g0217751 Lupinus albus HOM05D002921 ORTHO05D003258 2.2e-11 73.9 56 66.1
Os09g0287500 Oryza sativa ssp. japonica HOM05D002921 ORTHO05D003258 2.2e-11 73.9 55 67.3
Aa31LG2G2450 Aethionema arabicum HOM05D002921 ORTHO05D003258 2.8e-11 73.6 56 67.9
PSO063G1762 Papaver somniferum HOM05D002921 ORTHO05D003258 2.8e-11 73.6 56 67.9
Psat7g101080 Pisum sativum HOM05D002921 ORTHO05D003258 2.8e-11 73.6 56 64.3
RcHm_v2.0_Chr3g0447501 Rosa chinensis HOM05D002921 ORTHO05D003258 2.8e-11 73.6 49 75.5
Nitab4.5_0000751g0140 Nicotiana tabacum HOM05D002921 ORTHO05D003258 3.7e-11 73.2 56 66.1
Nitab4.5_0000819g0040 Nicotiana tabacum HOM05D002921 ORTHO05D003258 3.7e-11 73.2 56 66.1
Peaxi162Scf00253g00513 Petunia axillaris HOM05D002921 ORTHO05D003258 3.7e-11 73.2 56 66.1
Sabra08G0057300 Salix brachista HOM05D002921 ORTHO05D003258 3.7e-11 73.2 55 65.5
Solyc03g063060.3 Solanum lycopersicum HOM05D002921 ORTHO05D003258 3.7e-11 73.2 56 66.1
Sopen03g015350 Solanum pennellii HOM05D002921 ORTHO05D003258 3.7e-11 73.2 56 66.1
Aqoxy4G01704 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 4.8e-11 72.8 54 55.6
Ciclev10012826m.g Citrus clementina HOM05D002921 ORTHO05D003258 4.8e-11 72.8 49 75.5
Glyma.08G068000 Glycine max HOM05D002921 ORTHO05D003258 4.8e-11 72.8 56 66.1
AL2G22090 Arabidopsis lyrata HOM05D002921 ORTHO05D003258 6.3e-11 72.4 49 73.5
AT1G65420 Arabidopsis thaliana HOM05D002921 ORTHO05D003258 6.3e-11 72.4 49 73.5
Carub.0002s1113 Capsella rubella HOM05D002921 ORTHO05D003258 6.3e-11 72.4 49 73.5
Haze_04577 Corylus avellana HOM05D002921 ORTHO05D003258 6.3e-11 72.4 56 66.1
Thhalv10019157m.g Eutrema salsugineum HOM05D002921 ORTHO05D003258 6.3e-11 72.4 49 73.5
Sp5g20150 Schrenkiella parvula HOM05D002921 ORTHO05D003258 6.3e-11 72.4 49 73.5
HPP92_007388 Vanilla planifolia HOM05D002921 ORTHO05D003258 6.3e-11 72.4 55 67.3
Aqoxy153s002 Aquilegia oxysepala HOM05D009857 ORTHO05D077696 8.3e-11 72.0 52 55.8
Aqoxy1G02505 Aquilegia oxysepala HOM05D009857 ORTHO05D078760 8.3e-11 72.0 52 55.8
Aqoxy2G01682 Aquilegia oxysepala HOM05D009857 ORTHO05D000013 8.3e-11 72.0 52 55.8
Aqoxy2G02398 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 8.3e-11 72.0 52 55.8
Aqoxy3G01451 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 8.3e-11 72.0 52 55.8
Aqoxy5G02524 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 8.3e-11 72.0 52 55.8
BcaC03g14703 Brassica carinata HOM05D002921 ORTHO05D003258 8.3e-11 72.0 47 76.6
FvH4_6g00150 Fragaria vesca HOM05D002921 ORTHO05D003258 8.3e-11 72.0 47 76.6
FAN02G1717 Fragaria x ananassa HOM05D002921 ORTHO05D003258 8.3e-11 72.0 47 76.6
FAN09G4795 Fragaria x ananassa HOM05D002921 ORTHO05D003258 8.3e-11 72.0 47 76.6
PSO754G0063 Papaver somniferum HOM05D002921 ORTHO05D003258 8.3e-11 72.0 56 66.1
Phvul.002G212700 Phaseolus vulgaris HOM05D002921 ORTHO05D003258 8.3e-11 72.0 56 66.1
GSVIVG01003760001 Vitis vinifera HOM05D002921 ORTHO05D003258 8.3e-11 72.0 56 66.1
CAN.G492.40 Capsicum annuum HOM05D002921 ORTHO05D003258 1.1e-10 71.6 56 64.3
AUR62010863 Chenopodium quinoa HOM05D002921 ORTHO05D003258 1.1e-10 71.6 56 66.1
AUR62019862 Chenopodium quinoa HOM05D002921 ORTHO05D003258 1.1e-10 71.6 56 66.1
unitig_46.g18569 Utricularia gibba HOM05D002921 ORTHO05D003258 1.1e-10 71.6 55 67.3
ATR0757G095 Amborella trichopoda HOM05D002921 ORTHO05D003258 1.4e-10 71.2 56 64.3
Medtr4g093535 Medicago truncatula HOM05D002921 ORTHO05D003258 1.4e-10 71.2 55 65.5
Zm00001eb213480 Zea mays HOM05D002921 ORTHO05D003258 1.4e-10 71.2 48 75.0
BcaB05g24112 Brassica carinata HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
A02p13200 Brassica napus HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
A07p32810 Brassica napus HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
C02p21360 Brassica napus HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
BolC6t38996H Brassica oleracea HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
BraA02t06376Z Brassica rapa HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
BraA07t30908Z Brassica rapa HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
HanXRQChr16g0511791 Helianthus annuus HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
Lsat_1_v5_gn_6_23480 Lactuca sativa HOM05D002921 ORTHO05D003258 1.8e-10 70.9 47 74.5
Oeu062040.1 Olea europaea HOM05D002921 ORTHO05D003258 1.8e-10 70.9 49 73.5
SalBow1G3438 Salvia bowleyana HOM05D002921 ORTHO05D003258 1.8e-10 70.9 49 71.4
SalBow1G3450 Salvia bowleyana HOM05D002921 ORTHO05D003258 1.8e-10 70.9 49 71.4
Ah.12g052710 Amaranthus hybridus HOM05D002921 ORTHO05D003258 2.4e-10 70.5 47 72.3
ClCG03G010340 Citrullus lanatus HOM05D002921 ORTHO05D003258 2.4e-10 70.5 48 75.0
MELO3C010023.2 Cucumis melo HOM05D002921 ORTHO05D003258 2.4e-10 70.5 48 75.0
CsaV3_1G044300 Cucumis sativus L. HOM05D002921 ORTHO05D003258 2.4e-10 70.5 48 75.0
Migut.F02097 Erythranthe guttata HOM05D002921 ORTHO05D003258 2.4e-10 70.5 49 69.4
Lj1P584T26 Lonicera japonica HOM05D002921 ORTHO05D003258 2.4e-10 70.5 47 74.5
SGA_v2.0_scaffold62G21489 Striga asiatica HOM05D002921 ORTHO05D003258 2.4e-10 70.5 47 72.3
C06p39040 Brassica napus HOM05D002921 ORTHO05D003258 4.1e-10 69.7 47 72.3
Os02g0233333 Oryza sativa ssp. japonica HOM05D002921 ORTHO05D003258 4.1e-10 69.7 48 72.9
SMO287G0015 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 4.1e-10 69.7 49 63.3
TPR.G2829 Trifolium pratense HOM05D002921 ORTHO05D003258 4.1e-10 69.7 47 74.5
vmacro19820 Vaccinium macrocarpon HOM05D002921 ORTHO05D003258 4.1e-10 69.7 47 72.3
Aqoxy2G01873 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 5.3e-10 69.3 52 51.9
CDE02G3510 Ceratophyllum demersum HOM05D002921 ORTHO05D003258 5.3e-10 69.3 46 76.1
CDE09G0863 Ceratophyllum demersum HOM05D002921 ORTHO05D003258 5.3e-10 69.3 46 76.1
ECA232G0659 Erigeron canadensis HOM05D002921 ORTHO05D003258 5.3e-10 69.3 47 72.3
Glyma.07G181800 Glycine max HOM05D002921 ORTHO05D003258 5.3e-10 69.3 47 72.3
Sed0003908 Sechium edule HOM05D002921 ORTHO05D003258 5.3e-10 69.3 48 72.9
SMO171G0068 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 5.3e-10 69.3 49 61.2
SMO353G0424 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 9.1e-10 68.6 49 61.2
Mapoly0009s0023 Marchantia polymorpha HOM05D002921 ORTHO05D003258 1.2e-09 68.2 52 61.5
SMO353G0155 Selaginella moellendorffii HOM05D002921 ORTHO05D003258 1.2e-09 68.2 49 63.3
SEGI_25888 Sequoiadendron giganteum HOM05D002921 ORTHO05D003258 1.2e-09 68.2 49 67.3
Aqoxy2G02480 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 2.7e-09 67.0 51 54.9
Aqoxy5G03541 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 2.7e-09 67.0 51 54.9
BcaNung05533 Brassica carinata HOM05D002921 ORTHO05D003258 2.7e-09 67.0 45 73.3
Aqoxy1G02827 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 2.9e-08 63.5 46 60.9
Aqoxy2G02468 Aquilegia oxysepala HOM05D000017 ORTHO05D000013 2.9e-08 63.5 46 60.9
Aqoxy5G03518 Aquilegia oxysepala HOM05D009857 ORTHO05D013444 2.9e-08 63.5 46 60.9
EL10Ac5g12939 Beta vulgaris HOM05D002921 ORTHO05D003258 5.0e-08 62.8 45 66.7
CAN.G203.37 Capsicum annuum HOM05D002921 ORTHO05D003258 8.5e-08 62.0 50 58.0
Pp3c11_23050 Physcomitrium patens HOM05D002921 ORTHO05D003258 2.5e-07 60.5 52 57.7
Hund21926 Selenicereus undatus HOM05D002921 ORTHO05D003258 3.2e-07 60.1 43 69.8
Sc16g0010580 Simmondsia chinensis HOM05D002921 ORTHO05D003258 3.2e-07 60.1 39 79.5
Dinv41778 Davidia involucrata HOM05D002921 ORTHO05D003258 3.6e-06 56.6 36 80.6


User provided reference genes

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