Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02070 Aquilegia oxysepala HOM05D004299 ORTHO05D003557 7.6e-310 1066.6 665 100.0
Nn3g19291 Nelumbo nucifera HOM05D004299 ORTHO05D003557 1.6e-28 132.1 342 35.4
PSO017G1908 Papaver somniferum HOM05D004299 ORTHO05D003557 2.0e-23 115.2 207 43.0
TAR374G1619 Trochodendron aralioides HOM05D004299 ORTHO05D003557 2.2e-22 111.7 753 25.5
PSO478G4400 Papaver somniferum HOM05D018639 ORTHO05D003557 4.1e-21 107.5 207 41.1
TAR374G0649 Trochodendron aralioides HOM05D004299 ORTHO05D003557 4.1e-21 107.5 753 25.2
Nn1g01977 Nelumbo nucifera HOM05D004299 ORTHO05D003557 1.3e-19 102.4 817 27.1
MELO3C005430.2 Cucumis melo HOM05D013728 ORTHO05D003557 1.1e-18 99.4 322 31.1
ClCG01G005040 Citrullus lanatus HOM05D013728 ORTHO05D003557 1.9e-18 98.6 360 30.6
Dinv29171 Davidia involucrata HOM05D004299 ORTHO05D003557 1.2e-17 95.9 135 45.9
MD01G1233900 Malus domestica HOM05D004299 ORTHO05D003557 4.7e-17 94.0 691 27.1
Sed0000182 Sechium edule HOM05D004299 ORTHO05D003557 1.4e-16 92.4 270 34.4
Manes.09G124200 Manihot esculenta HOM05D004299 ORTHO05D003557 3.1e-16 91.3 244 36.1
CiPaw.05G237300 Carya illinoinensis HOM05D004299 ORTHO05D003557 4.0e-16 90.9 345 31.9
Solyc06g072810.4 Solanum lycopersicum HOM05D004299 ORTHO05D003557 8.9e-16 89.7 425 27.1
CsaV3_5G005290 Cucumis sativus L. HOM05D013728 ORTHO05D003557 1.2e-15 89.4 364 29.9
HanXRQChr17g0554401 Helianthus annuus HOM05D004299 ORTHO05D003557 1.2e-15 89.4 343 29.7
CDE02G2994 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 3.4e-15 87.8 352 31.0
CsaV3_5G015680 Cucumis sativus L. HOM05D004299 ORTHO05D003557 3.4e-15 87.8 301 32.2
GSVIVG01024444001 Vitis vinifera HOM05D004299 ORTHO05D003557 3.4e-15 87.8 264 34.5
RcHm_v2.0_Chr1g0383881 Rosa chinensis HOM05D012506 ORTHO05D003557 5.8e-15 87.0 279 33.7
Lj3A889G76 Lonicera japonica HOM05D004299 ORTHO05D003557 7.6e-15 86.7 355 31.3
Sopen06g029190 Solanum pennellii HOM05D004299 ORTHO05D003557 9.9e-15 86.3 425 26.4
CSS0016343 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 1.3e-14 85.9 446 28.5
PSO782G5567 Papaver somniferum HOM05D018639 ORTHO05D003557 1.7e-14 85.5 208 35.6
ECA247G1921 Erigeron canadensis HOM05D004299 ORTHO05D003557 2.9e-14 84.7 290 34.5
PGSC0003DMG400026934 Solanum tuberosum HOM05D004299 ORTHO05D003557 2.9e-14 84.7 425 25.6
A02p03950 Brassica napus HOM05D004299 ORTHO05D003557 3.7e-14 84.3 310 31.0
MBI04_g44838_MAGBIO Magnolia biondii HOM05D027374 ORTHO05D030041 3.7e-14 84.3 376 30.3
Actinidia34301 Actinidia chinensis HOM05D004299 ORTHO05D003557 6.4e-14 83.6 233 35.6
Nitab4.5_0002193g0040 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.4e-14 83.6 357 27.2
Prupe.2G324100 Prunus persica HOM05D004299 ORTHO05D003557 8.4e-14 83.2 357 31.7
TPR.G8414 Trifolium pratense HOM05D004299 ORTHO05D003557 8.4e-14 83.2 289 30.1
Ah.04g157210 Amaranthus hybridus HOM05D022644 ORTHO05D003557 1.1e-13 82.8 216 33.8
BolC2t06791H Brassica oleracea HOM05D004299 ORTHO05D003557 1.4e-13 82.4 320 29.4
Cpa.g.sc39.57 Carica papaya HOM05D004299 ORTHO05D003557 1.4e-13 82.4 323 31.0
MD07G1306000 Malus domestica HOM05D004299 ORTHO05D003557 1.9e-13 82.0 701 26.8
Manes.08G164200 Manihot esculenta HOM05D004299 ORTHO05D003557 1.9e-13 82.0 402 30.8
Actinidia08739 Actinidia chinensis HOM05D004299 ORTHO05D003557 2.4e-13 81.6 232 32.3
Duzib106G1502 Durio zibethinus HOM05D004299 ORTHO05D003557 2.4e-13 81.6 249 32.9
CDE11G0117 Ceratophyllum demersum HOM05D004299 ORTHO05D003557 3.2e-13 81.3 314 29.9
Hma1.2p1_0758F.1_g213620 Hydrangea macrophylla HOM05D004299 ORTHO05D003557 3.2e-13 81.3 205 35.1
Lj3g0021850 Lotus japonicus HOM05D004299 ORTHO05D003557 3.2e-13 81.3 271 31.0
Nitab4.5_0000021g0310 Nicotiana tabacum HOM05D004299 ORTHO05D003557 5.4e-13 80.5 364 28.0
Thecc.05G208300 Theobroma cacao HOM05D004299 ORTHO05D003557 7.1e-13 80.1 370 30.3
Sabra13G0071500 Salix brachista HOM05D004299 ORTHO05D003557 9.2e-13 79.7 294 29.9
Carub.0006s1534 Capsella rubella HOM05D004299 ORTHO05D003557 1.2e-12 79.3 182 37.9
PGR042G3162 Punica granatum HOM05D004299 ORTHO05D003557 1.2e-12 79.3 323 31.9
Potri.013G081600 Populus trichocarpa HOM05D004299 ORTHO05D003557 1.6e-12 79.0 333 29.7
Glyma.12G018900 Glycine max HOM05D004299 ORTHO05D003557 2.1e-12 78.6 220 33.2
Ciclev10023566m.g Citrus clementina HOM05D004299 ORTHO05D003557 2.7e-12 78.2 211 34.6
Glyma.11G092600 Glycine max HOM05D004299 ORTHO05D003557 2.7e-12 78.2 221 33.5
Nitab4.5_0005081g0100 Nicotiana tabacum HOM05D004299 ORTHO05D003557 2.7e-12 78.2 313 32.3
AT3G03130 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 3.5e-12 77.8 222 32.0
BcaC03g18533 Brassica carinata HOM05D004299 ORTHO05D003557 3.5e-12 77.8 320 29.4
arahy.Tifrunner.gnm1.ann1.KHZX7Q Arachis hypogaea HOM05D004299 ORTHO05D003557 4.6e-12 77.4 379 28.5
BcaB08g36802 Brassica carinata HOM05D004299 ORTHO05D003557 4.6e-12 77.4 336 29.2
Peaxi162Scf00815g00349 Petunia axillaris HOM05D004299 ORTHO05D003557 4.6e-12 77.4 349 27.8
Sed0018309 Sechium edule HOM05D004299 ORTHO05D003557 4.6e-12 77.4 262 30.9
CSS0010494 Camellia sinensis var. sinensis HOM05D004299 ORTHO05D003557 6.0e-12 77.0 824 23.8
Nitab4.5_0000115g0360 Nicotiana tabacum HOM05D004299 ORTHO05D003557 6.0e-12 77.0 360 30.6
Gohir.D08G243500 Gossypium hirsutum HOM05D004299 ORTHO05D003557 7.8e-12 76.6 325 31.4
PSO063G4917 Papaver somniferum HOM05D018639 ORTHO05D003557 7.8e-12 76.6 317 29.0
Thhalv10013127m.g Eutrema salsugineum HOM05D004299 ORTHO05D003557 1.0e-11 76.3 396 26.8
Lsat_1_v5_gn_8_135240 Lactuca sativa HOM05D004299 ORTHO05D003557 1.0e-11 76.3 298 30.9
Duzib128G1020 Durio zibethinus HOM05D004299 ORTHO05D003557 1.7e-11 75.5 92 53.3
Gohir.A08G223300 Gossypium hirsutum HOM05D004299 ORTHO05D003557 1.7e-11 75.5 327 30.9
Sabra19G0058100 Salix brachista HOM05D004299 ORTHO05D003557 1.7e-11 75.5 296 30.1
Atru.chr12.1996 Acer truncatum HOM05D004299 ORTHO05D003557 2.3e-11 75.1 209 33.5
Ca_04929_v3 Cicer arietinum L. HOM05D004299 ORTHO05D003557 2.3e-11 75.1 261 30.3
vmacro06502 Vaccinium macrocarpon HOM05D004299 ORTHO05D003557 3.0e-11 74.7 751 24.2
CARHR196070 Cardamine hirsuta HOM05D004299 ORTHO05D003557 3.9e-11 74.3 296 31.8
C03p09520 Brassica napus HOM05D004299 ORTHO05D003557 5.1e-11 73.9 248 34.3
Eucgr.G02658 Eucalyptus grandis HOM05D004299 ORTHO05D003557 5.1e-11 73.9 314 31.2
FAN01G2289 Fragaria x ananassa HOM05D012506 ORTHO05D003557 6.6e-11 73.6 249 32.5
COL.COLO4_06387 Corchorus olitorius HOM05D004299 ORTHO05D003557 8.6e-11 73.2 326 30.4
QL09p025753 Quercus lobata HOM05D004299 ORTHO05D003557 8.6e-11 73.2 426 28.4
Gorai.004G259400 Gossypium raimondii HOM05D004299 ORTHO05D003557 1.1e-10 72.8 325 30.8
VMungo1127G2117 Vigna mungo HOM05D004299 ORTHO05D003557 1.1e-10 72.8 176 34.1
Zm00001eb251590 Zea mays HOM05D021310 ORTHO05D003557 1.5e-10 72.4 262 27.9
AT5G17160 Arabidopsis thaliana HOM05D004299 ORTHO05D003557 1.9e-10 72.0 372 26.9
arahy.Tifrunner.gnm1.ann1.R3QID6 Arachis hypogaea HOM05D004299 ORTHO05D003557 1.9e-10 72.0 538 24.5
unitig_52.g17695 Utricularia gibba HOM05D004299 ORTHO05D003557 1.9e-10 72.0 282 29.1
BcaB01g04949 Brassica carinata HOM05D004299 ORTHO05D003557 3.3e-10 71.2 364 29.1
BraA03t10142Z Brassica rapa HOM05D004299 ORTHO05D003557 4.3e-10 70.9 390 26.2
Carub.0003s0228 Capsella rubella HOM05D004299 ORTHO05D003557 4.3e-10 70.9 177 33.3
BcaC04g18829 Brassica carinata HOM05D004299 ORTHO05D003557 5.6e-10 70.5 177 35.6
Lalb_Chr09g0320301 Lupinus albus HOM05D004299 ORTHO05D003557 5.6e-10 70.5 338 29.0
Lsat_1_v5_gn_3_37921 Lactuca sativa HOM05D004299 ORTHO05D003557 7.3e-10 70.1 331 28.4
Rhsim03G0220700 Rhododendron simsii HOM05D004299 ORTHO05D003557 7.3e-10 70.1 374 25.9
BcaB01g05216 Brassica carinata HOM05D004299 ORTHO05D003557 9.6e-10 69.7 393 27.7
FAN10G0189 Fragaria x ananassa HOM05D012506 ORTHO05D003557 1.2e-09 69.3 271 31.0
Psat7g171480 Pisum sativum HOM05D004299 ORTHO05D003557 1.2e-09 69.3 304 27.3
Hund21092 Selenicereus undatus HOM05D004299 ORTHO05D003557 1.6e-09 68.9 217 31.3
CARHR077150 Cardamine hirsuta HOM05D004299 ORTHO05D003557 2.1e-09 68.6 269 31.2
PSO478G3049 Papaver somniferum HOM05D004299 ORTHO05D003557 2.1e-09 68.6 115 40.0
C03p60040 Brassica napus HOM05D004299 ORTHO05D003557 2.8e-09 68.2 117 38.5
BolC3t18269H Brassica oleracea HOM05D004299 ORTHO05D003557 2.8e-09 68.2 117 38.5
Medtr4g077590 Medicago truncatula HOM05D004299 ORTHO05D003557 2.8e-09 68.2 373 29.0
THA.LOC104802916 Tarenaya hassleriana HOM05D004299 ORTHO05D003557 2.8e-09 68.2 179 35.2
CANSAT35G1347 Cannabis sativa HOM05D004299 ORTHO05D003557 3.6e-09 67.8 160 38.8
A03p08220 Brassica napus HOM05D004299 ORTHO05D003557 4.7e-09 67.4 383 26.4
Migut.F00952 Erythranthe guttata HOM05D004299 ORTHO05D003557 6.2e-09 67.0 411 27.3
FAN10G3788 Fragaria x ananassa HOM05D012506 ORTHO05D003557 6.2e-09 67.0 249 31.7
Aa31LG5G13610 Aethionema arabicum HOM05D004299 ORTHO05D003557 8.1e-09 66.6 386 24.4
Haze_00596 Corylus avellana HOM05D004299 ORTHO05D003557 8.1e-09 66.6 323 29.1
ECA246G3276 Erigeron canadensis HOM05D004299 ORTHO05D003557 8.1e-09 66.6 397 26.7
AL3G12740 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 1.1e-08 66.2 237 31.6
Cfa015894 Carpinus fangiana HOM05D004299 ORTHO05D003557 1.1e-08 66.2 399 29.6
FvH4_7g33621 Fragaria vesca HOM05D012506 ORTHO05D003557 1.1e-08 66.2 334 26.9
Peaxi162Scf00745g00852 Petunia axillaris HOM05D004299 ORTHO05D003557 1.4e-08 65.9 316 30.4
PSO541G1500 Papaver somniferum HOM05D018639 ORTHO05D037265 2.4e-08 65.1 249 32.1
Potri.019G046801 Populus trichocarpa HOM05D004299 ORTHO05D003557 2.4e-08 65.1 346 27.7
Lalb_Chr01g0001001 Lupinus albus HOM05D004299 ORTHO05D003557 3.1e-08 64.7 347 28.2
TWI34G1775 Tripterygium wilfordii HOM05D004299 ORTHO05D003557 4.0e-08 64.3 370 28.6
AL6G28200 Arabidopsis lyrata HOM05D004299 ORTHO05D003557 5.2e-08 63.9 340 27.6
MSTRG.13 Avicennia marina HOM05D004299 ORTHO05D003557 6.8e-08 63.5 330 29.1
SGA_v2.0_scaffold50G18437 Striga asiatica HOM05D024109 ORTHO05D003557 8.9e-08 63.2 33 87.9
C02p08770 Brassica napus HOM05D004299 ORTHO05D003557 1.2e-07 62.8 533 24.6
PSO675G1109 Papaver somniferum HOM05D018639 ORTHO05D037265 1.5e-07 62.4 300 28.7
HanXRQChr17g0541651 Helianthus annuus HOM05D004299 ORTHO05D003557 2.0e-07 62.0 39 74.4
MSTRG.1096 Avicennia marina HOM05D027784 ORTHO05D010674 2.6e-07 61.6 195 30.8
SalBow2G2429 Salvia bowleyana HOM05D004299 ORTHO05D003557 2.6e-07 61.6 352 27.0
Phvul.011G021300 Phaseolus vulgaris HOM05D004299 ORTHO05D003557 3.4e-07 61.2 359 27.6
Gohir.D05G245401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 4.4e-07 60.8 143 31.5
Os04g0597900 Oryza sativa ssp. japonica HOM05D021310 ORTHO05D003557 4.4e-07 60.8 44 61.4
PSO017G4482 Papaver somniferum HOM05D018639 ORTHO05D037265 5.8e-07 60.5 304 28.0
Cc02_g00400 Coffea canephora HOM05D004299 ORTHO05D003557 7.6e-07 60.1 415 24.8
MELO3C026497.2 Cucumis melo HOM05D004299 ORTHO05D003557 7.6e-07 60.1 33 81.8
FAN03G0789 Fragaria x ananassa HOM05D012506 ORTHO05D003557 7.6e-07 60.1 265 29.4
MELO3C028918.2 Cucumis melo HOM05D004299 ORTHO05D003557 9.9e-07 59.7 34 82.4
Zm00001eb063140 Zea mays HOM05D021310 ORTHO05D003557 9.9e-07 59.7 208 30.3
BolC3t13447H Brassica oleracea HOM05D004299 ORTHO05D003557 1.3e-06 59.3 471 25.9
AUR62034598 Chenopodium quinoa HOM05D022644 ORTHO05D003557 1.3e-06 59.3 79 40.5
MELO3C026562.2 Cucumis melo HOM05D004299 ORTHO05D003557 1.3e-06 59.3 33 84.8
Gorai.009G255200 Gossypium raimondii HOM05D013130 ORTHO05D022454 1.3e-06 59.3 143 30.8
Sp3g02170 Schrenkiella parvula HOM05D004299 ORTHO05D003557 1.3e-06 59.3 405 27.4
ATR0149G001 Amborella trichopoda HOM05D033261 ORTHO05D003557 1.7e-06 58.9 119 39.5
Zm00001eb188050 Zea mays HOM05D021310 ORTHO05D003557 1.7e-06 58.9 240 29.2
Zm00001eb430160 Zea mays HOM05D033178 ORTHO05D037852 1.7e-06 58.9 44 65.9
Dinv25882 Davidia involucrata HOM05D016043 ORTHO05D010674 2.2e-06 58.5 86 38.4
Sc19g0000210 Simmondsia chinensis HOM05D004299 ORTHO05D003557 2.2e-06 58.5 250 27.6
HanXRQChr05g0158421 Helianthus annuus HOM05D000441 ORTHO05D003557 3.8e-06 57.8 36 75.0
HanXRQChr12g0357091 Helianthus annuus HOM05D000441 ORTHO05D003557 3.8e-06 57.8 36 75.0
AUR62005909 Chenopodium quinoa HOM05D022644 ORTHO05D003557 4.9e-06 57.4 333 26.4
Gohir.A05G244401 Gossypium hirsutum HOM05D013130 ORTHO05D022454 4.9e-06 57.4 143 30.8
SEGI_05410 Sequoiadendron giganteum HOM05D027683 ORTHO05D018353 4.9e-06 57.4 67 46.3
BraA02t05360Z Brassica rapa HOM05D004299 ORTHO05D003557 6.4e-06 57.0 686 21.7
Lalb_Chr16g0376621 Lupinus albus HOM05D004299 ORTHO05D003557 8.4e-06 56.6 350 26.0
SEGI_16647 Sequoiadendron giganteum HOM05D019055 ORTHO05D018353 8.4e-06 56.6 111 34.2


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