Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02061 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 2.6e-225 785.0 391 100.0
Aqoxy1G04104 Aquilegia oxysepala HOM05D005612 ORTHO05D007014 4.9e-224 780.8 391 99.0
Nn4g26368 Nelumbo nucifera HOM05D005612 ORTHO05D007014 1.5e-172 609.8 391 73.9
TAR375G1134 Trochodendron aralioides HOM05D005612 ORTHO05D007014 5.4e-170 601.3 391 75.2
GSVIVG01027677001 Vitis vinifera HOM05D005612 ORTHO05D007014 5.4e-170 601.3 391 74.2
CSS0047351 Camellia sinensis var. sinensis HOM05D005612 ORTHO05D007014 5.2e-165 584.7 391 72.9
vmacro13411 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 5.2e-165 584.7 391 73.9
PSO339G2081 Papaver somniferum HOM05D005612 ORTHO05D007014 1.2e-164 583.6 392 74.2
QL08p052678 Quercus lobata HOM05D005612 ORTHO05D007014 3.4e-164 582.0 392 73.0
Hma1.2p1_2025F.1_g311480 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 2.4e-162 575.9 391 71.9
PSO384G4101 Papaver somniferum HOM05D005612 ORTHO05D007014 3.2e-162 575.5 392 73.0
Atru.chr2.2479 Acer truncatum HOM05D005612 ORTHO05D007014 4.1e-162 575.1 391 71.9
Actinidia12252 Actinidia chinensis HOM05D005612 ORTHO05D007014 4.6e-161 571.6 387 71.1
Dinv43696 Davidia involucrata HOM05D005612 ORTHO05D007014 1.3e-160 570.1 391 72.4
Prupe.6G155400 Prunus persica HOM05D005612 ORTHO05D007014 2.9e-160 568.9 392 71.9
Hma1.2p1_0511F.1_g169190 Hydrangea macrophylla HOM05D005612 ORTHO05D007014 1.5e-159 566.6 391 71.1
Gorai.004G162600 Gossypium raimondii HOM05D005612 ORTHO05D007014 2.8e-158 562.4 409 68.2
CANSAT01G1400 Cannabis sativa HOM05D005612 ORTHO05D007014 6.8e-157 557.8 391 71.1
DCAR_008555 Daucus carota HOM05D005612 ORTHO05D007014 1.2e-156 557.0 391 70.3
TWI14G1300 Tripterygium wilfordii HOM05D005612 ORTHO05D007014 6.4e-155 551.2 391 68.8
Ciclev10010228m.g Citrus clementina HOM05D005612 ORTHO05D007014 1.4e-154 550.1 386 70.7
Thecc.01G378200 Theobroma cacao HOM05D005612 ORTHO05D007014 3.2e-154 548.9 409 68.0
Gohir.A08G135500 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.6e-153 546.6 409 66.7
Eucgr.E01443 Eucalyptus grandis HOM05D005612 ORTHO05D007014 2.7e-153 545.8 391 69.3
Duzib138G1608 Durio zibethinus HOM05D005612 ORTHO05D007014 3.5e-153 545.4 409 67.2
CsaV3_3G009760 Cucumis sativus L. HOM05D005612 ORTHO05D007014 1.3e-152 543.5 391 68.8
CiPaw.01G263000 Carya illinoinensis HOM05D005612 ORTHO05D007014 1.7e-152 543.1 391 69.3
Cpa.g.sc18.108 Carica papaya HOM05D005612 ORTHO05D007014 1.5e-151 540.0 370 73.2
Sed0014004 Sechium edule HOM05D005612 ORTHO05D007014 7.3e-151 537.7 391 68.3
ClCG05G002330 Citrullus lanatus HOM05D005612 ORTHO05D007014 9.5e-151 537.3 406 67.2
RcHm_v2.0_Chr3g0497141 Rosa chinensis HOM05D005612 ORTHO05D007014 8.1e-150 534.3 393 69.2
FAN28G0581 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.8e-149 533.1 393 68.7
COL.COLO4_12531 Corchorus olitorius HOM05D005612 ORTHO05D007014 3.1e-149 532.3 375 70.9
Potri.014G068500 Populus trichocarpa HOM05D005612 ORTHO05D007014 3.4e-148 528.9 390 69.5
FAN28G2973 Fragaria x ananassa HOM05D005612 ORTHO05D007014 7.5e-148 527.7 393 68.2
Peaxi162Scf00045g01936 Petunia axillaris HOM05D005612 ORTHO05D007014 2.2e-147 526.2 388 66.2
Migut.B01623 Erythranthe guttata HOM05D005612 ORTHO05D007014 8.3e-147 524.2 388 66.8
Gohir.D08G156300 Gossypium hirsutum HOM05D005612 ORTHO05D007014 2.4e-146 522.7 394 67.0
FAN23G2738 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.2e-146 522.3 393 67.4
FvH4_1g28100 Fragaria vesca HOM05D005612 ORTHO05D007014 5.4e-146 521.5 393 67.2
Lj3g0004128 Lotus japonicus HOM05D005612 ORTHO05D007014 7.1e-146 521.2 391 68.0
MSTRG.17178 Avicennia marina HOM05D005612 ORTHO05D007014 1.6e-145 520.0 388 65.2
Manes.05G046700 Manihot esculenta HOM05D005612 ORTHO05D007014 2.7e-145 519.2 391 67.0
Oeu055499.1 Olea europaea HOM05D005612 ORTHO05D007014 2.7e-145 519.2 376 67.3
Lalb_Chr03g0039601 Lupinus albus HOM05D005612 ORTHO05D007014 4.6e-145 518.5 391 67.0
TPR.G17234 Trifolium pratense HOM05D005612 ORTHO05D007014 4.6e-145 518.5 391 68.0
Cc02_g24020 Coffea canephora HOM05D005612 ORTHO05D007014 6.0e-145 518.1 391 65.0
Nitab4.5_0000264g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 7.8e-145 517.7 388 65.2
FAN26G0204 Fragaria x ananassa HOM05D005612 ORTHO05D007014 1.0e-144 517.3 415 64.1
MD00G1094900 Malus domestica HOM05D005612 ORTHO05D007014 1.0e-144 517.3 399 66.4
Haze_16797 Corylus avellana HOM05D005612 ORTHO05D007014 1.3e-144 516.9 365 71.8
Manes.01G266600 Manihot esculenta HOM05D005612 ORTHO05D007014 1.3e-144 516.9 391 65.2
THA.LOC104827614 Tarenaya hassleriana HOM05D005612 ORTHO05D007014 1.3e-144 516.9 391 66.0
PGR042G0232 Punica granatum HOM05D005612 ORTHO05D007014 3.9e-144 515.4 385 67.0
vmacro21020 Vaccinium macrocarpon HOM05D005612 ORTHO05D007014 6.6e-144 514.6 396 67.2
AUR62000130 Chenopodium quinoa HOM05D005612 ORTHO05D007014 1.5e-143 513.5 401 65.3
Solyc08g006610.3 Solanum lycopersicum HOM05D005612 ORTHO05D007014 3.3e-143 512.3 388 64.4
Carub.0004s2795 Capsella rubella HOM05D005612 ORTHO05D007014 4.3e-143 511.9 392 65.8
Phvul.011G138100 Phaseolus vulgaris HOM05D005612 ORTHO05D007014 4.3e-143 511.9 391 67.3
CAN.G530.1 Capsicum annuum HOM05D005612 ORTHO05D007014 1.2e-142 510.4 389 65.0
Psat0s2995g0040 Pisum sativum HOM05D005612 ORTHO05D007014 1.2e-142 510.4 392 68.1
arahy.Tifrunner.gnm1.ann1.39QM8U Arachis hypogaea HOM05D005612 ORTHO05D007014 1.6e-142 510.0 391 67.8
Cfa015219 Carpinus fangiana HOM05D005612 ORTHO05D007014 1.6e-142 510.0 367 70.3
Sopen08g002560 Solanum pennellii HOM05D005612 ORTHO05D007014 2.1e-142 509.6 388 64.4
Hund07502 Selenicereus undatus HOM05D005612 ORTHO05D007014 3.6e-142 508.8 416 62.5
Glyma.12G134000 Glycine max HOM05D005612 ORTHO05D007014 8.1e-142 507.7 391 66.5
arahy.Tifrunner.gnm1.ann1.Q1YE57 Arachis hypogaea HOM05D005612 ORTHO05D007014 1.2e-140 503.8 386 67.9
EL10Ac4g10240 Beta vulgaris HOM05D005612 ORTHO05D007014 2.6e-140 502.7 393 65.6
AL4G44420 Arabidopsis lyrata HOM05D005612 ORTHO05D007014 5.8e-140 501.5 396 64.9
Glyma.06G270700 Glycine max HOM05D005612 ORTHO05D007014 4.9e-139 498.4 393 66.4
ECA236G2759 Erigeron canadensis HOM05D005612 ORTHO05D007014 1.1e-138 497.3 392 63.5
AT2G45320 Arabidopsis thaliana HOM05D005612 ORTHO05D007014 3.2e-138 495.7 396 64.4
Thhalv10001485m.g Eutrema salsugineum HOM05D005612 ORTHO05D007014 1.6e-137 493.4 393 64.1
Lalb_Chr01g0021461 Lupinus albus HOM05D005612 ORTHO05D007014 1.6e-137 493.4 391 65.2
Medtr4g053430 Medicago truncatula HOM05D005612 ORTHO05D007014 1.0e-136 490.7 352 71.6
Sp4g27340 Schrenkiella parvula HOM05D005612 ORTHO05D007014 6.6e-136 488.0 392 63.8
A03p25180 Brassica napus HOM05D005612 ORTHO05D007014 1.2e-134 483.8 392 62.5
HanXRQChr04g0122751 Helianthus annuus HOM05D005612 ORTHO05D007014 1.1e-133 480.7 392 63.5
Lsat_1_v5_gn_7_9741 Lactuca sativa HOM05D005612 ORTHO05D007014 1.8e-133 479.9 379 65.2
unitig_749.g14376 Utricularia gibba HOM05D005612 ORTHO05D007014 1.8e-133 479.9 388 62.9
BraA03t11718Z Brassica rapa HOM05D005612 ORTHO05D007014 2.4e-133 479.6 392 62.0
BcaB01g03271 Brassica carinata HOM05D005612 ORTHO05D007014 5.2e-133 478.4 392 61.7
BcaC01g05140 Brassica carinata HOM05D005612 ORTHO05D007014 6.8e-133 478.0 392 62.8
BolC3t15349H Brassica oleracea HOM05D005612 ORTHO05D007014 6.8e-133 478.0 392 62.8
SalBow5G3218 Salvia bowleyana HOM05D005612 ORTHO05D007014 8.9e-133 477.6 369 64.5
C03p30020 Brassica napus HOM05D005612 ORTHO05D007014 2.9e-131 472.6 394 61.9
Sabra14G0048200 Salix brachista HOM05D005612 ORTHO05D007014 3.8e-131 472.2 380 65.5
Lj7C530T5 Lonicera japonica HOM05D005612 ORTHO05D007014 4.9e-131 471.9 424 59.0
Lsat_1_v5_gn_8_86120 Lactuca sativa HOM05D005612 ORTHO05D007014 1.7e-128 463.4 367 65.4
Ca_19396_v3 Cicer arietinum L. HOM05D005612 ORTHO05D007014 4.3e-127 458.8 343 67.6
Ah.04g161950 Amaranthus hybridus HOM05D004275 ORTHO05D005720 5.6e-127 458.4 418 58.1
Sc16g0011470 Simmondsia chinensis HOM05D005612 ORTHO05D007014 8.1e-126 454.5 352 66.8
MELO3C006197.2 Cucumis melo HOM05D005612 ORTHO05D007014 1.5e-124 450.3 336 66.7
Nitab4.5_0005450g0010 Nicotiana tabacum HOM05D005612 ORTHO05D007014 1.1e-122 444.1 388 58.2
Zm00001eb195050 Zea mays HOM05D005612 ORTHO05D007014 4.8e-118 428.7 380 60.0
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 9.9e-116 421.0 322 64.9
CDE07G1659 Ceratophyllum demersum HOM05D005612 ORTHO05D007014 2.4e-114 416.4 342 61.7
AUR62019310 Chenopodium quinoa HOM05D005612 ORTHO05D007014 4.0e-109 399.1 265 72.8
VMungo1127G0102 Vigna mungo HOM05D005612 ORTHO05D007014 2.4e-101 373.2 253 71.1
ATR1100G025 Amborella trichopoda HOM05D005612 ORTHO05D007014 1.0e-99 367.9 316 59.8
unitig_76.g29085 Utricularia gibba HOM05D005612 ORTHO05D007014 1.3e-94 350.9 388 50.5
MBI14_g08144_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 3.4e-92 342.8 265 67.2
ATR0686G054 Amborella trichopoda HOM05D005612 ORTHO05D007014 9.7e-87 324.7 262 62.2
CiPaw.09G176500 Carya illinoinensis HOM05D005612 ORTHO05D007014 2.6e-84 316.6 325 52.9
CARHR140520 Cardamine hirsuta HOM05D005612 ORTHO05D007014 5.0e-83 312.4 188 78.7
Aa31LG1G26830 Aethionema arabicum HOM05D005612 ORTHO05D007014 2.1e-81 307.0 195 73.8
Duzib138G0844 Durio zibethinus HOM05D005612 ORTHO05D007014 1.2e-73 281.2 165 80.6
SGA_v2.0_scaffold153G37000 Striga asiatica HOM05D005612 ORTHO05D007014 8.8e-72 275.0 226 62.4
SMO119G0175 Selaginella moellendorffii HOM05D005612 ORTHO05D007014 1.2e-68 264.6 279 47.0
Dinv32369 Davidia involucrata HOM05D005612 ORTHO05D007014 4.5e-68 262.7 217 62.7
Zm00001eb012290 Zea mays HOM05D005612 ORTHO05D007014 5.0e-67 259.2 188 66.0
Zm00001eb249030 Zea mays HOM05D005612 ORTHO05D007014 4.2e-66 256.1 178 69.7
FAN19G0199 Fragaria x ananassa HOM05D005612 ORTHO05D007014 3.6e-57 226.5 132 81.8
AagrBONN_evm.TU.Sc2ySwM_117.669 Anthoceros agrestis HOM05D005612 ORTHO05D007014 1.4e-53 214.5 236 50.0
Pp3c17_6010 Physcomitrium patens HOM05D005612 ORTHO05D007014 9.5e-50 201.8 347 38.0
CARHR140530 Cardamine hirsuta HOM05D005612 ORTHO05D007014 2.3e-48 197.2 187 57.2
MSTRG.28297 Avicennia marina HOM05D005612 ORTHO05D007014 1.8e-45 187.6 115 76.5
Zm00001eb385140 Zea mays HOM05D005612 ORTHO05D007014 3.9e-43 179.9 133 65.4
Zm00001eb084960 Zea mays HOM05D005612 ORTHO05D007014 4.3e-42 176.4 133 64.7
Medtr8g102045 Medicago truncatula HOM05D005612 ORTHO05D007014 6.8e-40 169.1 124 67.7
Gohir.A08G135200 Gossypium hirsutum HOM05D005612 ORTHO05D007014 1.5e-39 167.9 165 52.1
Medtr8g102040 Medicago truncatula HOM05D005612 ORTHO05D007014 3.7e-38 163.3 133 63.2
SEGI_33395 Sequoiadendron giganteum HOM05D005612 ORTHO05D007014 6.0e-36 156.0 174 51.7
Oeu011925.1 Olea europaea HOM05D005612 ORTHO05D007014 2.0e-31 141.0 200 43.0
Rhsim01G0149000 Rhododendron simsii HOM05D005612 ORTHO05D007014 4.4e-31 139.8 243 36.2
Zm00001eb270960 Zea mays HOM05D005612 ORTHO05D002685 2.4e-29 134.0 84 73.8
Gohir.A08G135550 Gossypium hirsutum HOM05D005612 ORTHO05D007014 7.1e-29 132.5 143 50.3
MBI14_g08143_MAGBIO Magnolia biondii HOM05D005612 ORTHO05D007014 1.7e-27 127.9 113 57.5
Zm00001eb321930 Zea mays HOM05D005612 ORTHO05D007014 3.6e-25 120.2 107 56.1
TAR626G0370 Trochodendron aralioides HOM05D005612 ORTHO05D007014 2.0e-23 114.4 63 82.5
Glyma.20G076400 Glycine max HOM05D005612 ORTHO05D007014 4.9e-22 109.8 75 66.7
Haze_18350 Corylus avellana HOM05D005612 ORTHO05D007014 3.2e-21 107.1 73 74.0
Os06g0571300 Oryza sativa ssp. japonica HOM05D005612 ORTHO05D007014 8.9e-16 89.0 93 59.1
MD15G1255900 Malus domestica HOM05D001392 ORTHO05D036605 3.9e-11 73.6 47 76.6
Medtr8g102042 Medicago truncatula HOM05D005612 ORTHO05D007014 6.6e-11 72.8 63 58.7
Lalb_Chr08g0243441 Lupinus albus HOM05D005612 ORTHO05D007014 2.8e-09 67.4 47 72.3
Dinv39084 Davidia involucrata HOM05D005612 ORTHO05D007014 1.4e-08 65.1 105 37.1


User provided reference genes

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