Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02052 Aquilegia oxysepala HOM05D012322 ORTHO05D001923 1.6e-160 569.3 283 100.0
Aqoxy3G00927 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 3.2e-79 299.3 457 42.2
Aqoxy3G02127 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 9.9e-41 171.4 110 82.7
Aqoxy1G03705 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 1.9e-36 157.1 170 46.5
Aqoxy7G02103 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 2.5e-36 156.8 170 45.9
Aqoxy4G01383 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 6.3e-19 99.0 178 37.1
Aqoxy4G03175 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.8e-18 97.4 178 36.5
Aqoxy5G04189 Aquilegia oxysepala HOM05D002907 ORTHO05D000065 1.8e-18 97.4 178 36.5
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 4.2e-15 86.3 221 28.1
DCAR_020135 Daucus carota HOM05D002907 ORTHO05D005554 2.7e-14 83.6 179 30.2
Hma1.2p1_0051F.1_g029450 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.6e-14 82.8 290 23.1
QL03p025410 Quercus lobata HOM05D000005 ORTHO05D000065 1.4e-13 81.3 144 29.9
Zm00001eb296900 Zea mays HOM05D008312 ORTHO05D010433 1.3e-11 74.7 137 27.0
Lalb_Chr13g0293801 Lupinus albus HOM05D002090 ORTHO05D001923 2.2e-11 73.9 160 30.0
SGA_v2.0_scaffold29G12295 Striga asiatica HOM05D002090 ORTHO05D001923 4.8e-11 72.8 153 28.8
Aqoxy4G01459 Aquilegia oxysepala HOM05D002907 ORTHO05D000174 1.1e-10 71.6 141 27.0
Aqoxy5G02969 Aquilegia oxysepala HOM05D002907 ORTHO05D005554 1.1e-10 71.6 141 27.0
Lalb_Chr15g0085801 Lupinus albus HOM05D002090 ORTHO05D001923 1.1e-10 71.6 149 30.2
Lalb_Chr09g0332941 Lupinus albus HOM05D002090 ORTHO05D001923 1.4e-10 71.2 129 32.6
Lalb_Chr24g0399451 Lupinus albus HOM05D002090 ORTHO05D001923 1.8e-10 70.9 151 31.1
SGA_v2.0_scaffold53G19410 Striga asiatica HOM05D002090 ORTHO05D000174 1.8e-10 70.9 292 21.2
Lalb_Chr02g0157101 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr07g0195661 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr09g0334041 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr11g0063921 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr15g0080831 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr24g0395611 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr25g0279801 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Lalb_Chr25g0284421 Lupinus albus HOM05D002090 ORTHO05D001923 2.4e-10 70.5 156 31.4
Medtr5g053590 Medicago truncatula HOM05D002090 ORTHO05D001923 2.4e-10 70.5 142 29.6
BolC9t54833H Brassica oleracea HOM05D000096 ORTHO05D000045 4.1e-10 69.7 184 28.8
Lalb_Chr01g0020731 Lupinus albus HOM05D002090 ORTHO05D001923 4.1e-10 69.7 156 31.4
Lalb_Chr10g0095211 Lupinus albus HOM05D002090 ORTHO05D001923 4.1e-10 69.7 156 31.4
Lalb_Chr14g0376091 Lupinus albus HOM05D002090 ORTHO05D001923 4.1e-10 69.7 156 31.4
Medtr5g004860 Medicago truncatula HOM05D002090 ORTHO05D001923 4.1e-10 69.7 147 27.9
AL8G21920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 5.3e-10 69.3 171 27.5
Lalb_Chr03g0030491 Lupinus albus HOM05D002090 ORTHO05D001923 5.3e-10 69.3 156 31.4
Lalb_Chr11g0064711 Lupinus albus HOM05D002090 ORTHO05D001923 5.3e-10 69.3 156 30.8
AL1G55630 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.9e-10 68.9 171 27.5
AL2G19920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.9e-10 68.9 171 27.5
AL4G20710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.9e-10 68.9 171 27.5
AL5G12710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.9e-10 68.9 171 27.5
AL6G41920 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 6.9e-10 68.9 171 27.5
AL7G11640 Arabidopsis lyrata HOM05D000353 ORTHO05D010269 6.9e-10 68.9 171 27.5
TWI63G0188 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 6.9e-10 68.9 142 31.7
AL1G50710 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 9.1e-10 68.6 171 27.5
Lalb_Chr12g0196331 Lupinus albus HOM05D002090 ORTHO05D001923 9.1e-10 68.6 156 30.8
Lalb_Chr16g0381501 Lupinus albus HOM05D002090 ORTHO05D001923 9.1e-10 68.6 156 30.8
Lalb_Chr20g0117751 Lupinus albus HOM05D002090 ORTHO05D001923 9.1e-10 68.6 156 30.8
Lalb_Chr23g0269621 Lupinus albus HOM05D002090 ORTHO05D001923 9.1e-10 68.6 156 30.8
Zm00001eb359870 Zea mays HOM05D008312 ORTHO05D010433 9.1e-10 68.6 158 29.7
ECA246G4325 Erigeron canadensis HOM05D000353 ORTHO05D000174 1.2e-09 68.2 172 26.7
TWI53G0762 Tripterygium wilfordii HOM05D002907 ORTHO05D007430 1.2e-09 68.2 141 31.2
AL2G22250 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.5e-09 67.8 171 27.5
Lalb_Chr03g0037681 Lupinus albus HOM05D002090 ORTHO05D001923 1.5e-09 67.8 105 31.4
Lalb_Chr20g0116791 Lupinus albus HOM05D002090 ORTHO05D001923 2.0e-09 67.4 105 31.4
Lalb_Chr25g0284411 Lupinus albus HOM05D002090 ORTHO05D001923 2.0e-09 67.4 125 29.6
Medtr2g060880 Medicago truncatula HOM05D002090 ORTHO05D001923 2.0e-09 67.4 133 30.1
AL9U11500 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 3.4e-09 66.6 171 26.9
Lalb_Chr13g0297541 Lupinus albus HOM05D002090 ORTHO05D001923 3.4e-09 66.6 105 30.5
Lalb_Chr18g0054881 Lupinus albus HOM05D002090 ORTHO05D001923 3.4e-09 66.6 105 30.5
Lalb_Chr11g0071391 Lupinus albus HOM05D002090 ORTHO05D001923 4.5e-09 66.2 126 31.0
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 4.5e-09 66.2 139 30.2
Psat4g010000 Pisum sativum HOM05D002090 ORTHO05D001923 4.5e-09 66.2 131 30.5
Lalb_Chr11g0063941 Lupinus albus HOM05D002090 ORTHO05D001923 5.9e-09 65.9 125 28.8
Lalb_Chr24g0395601 Lupinus albus HOM05D002090 ORTHO05D001923 5.9e-09 65.9 125 28.8
Lalb_Chr25g0279811 Lupinus albus HOM05D002090 ORTHO05D001923 5.9e-09 65.9 125 28.8
Medtr2g450060 Medicago truncatula HOM05D002090 ORTHO05D001923 5.9e-09 65.9 155 26.5
SGA_v2.0_scaffold142G35618 Striga asiatica HOM05D002090 ORTHO05D001923 5.9e-09 65.9 153 27.5
CAN.G1160.3 Capsicum annuum HOM05D002907 ORTHO05D000065 7.7e-09 65.5 127 30.7
Lalb_Chr10g0095221 Lupinus albus HOM05D002090 ORTHO05D001923 7.7e-09 65.5 105 32.4
Aqoxy3G01795 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 1.0e-08 65.1 199 29.6
Lalb_Chr11g0064701 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-08 65.1 105 31.4
Lalb_Chr12g0196311 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-08 65.1 105 31.4
Lalb_Chr16g0381491 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-08 65.1 105 31.4
Lalb_Chr20g0117761 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-08 65.1 105 31.4
Lalb_Chr23g0269611 Lupinus albus HOM05D002090 ORTHO05D001923 1.0e-08 65.1 105 31.4
Lalb_Chr13g0297521 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-08 64.7 105 30.5
Lalb_Chr20g0115931 Lupinus albus HOM05D002090 ORTHO05D001923 1.3e-08 64.7 105 31.4
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.3e-08 64.7 195 25.1
Aqoxy5G01704 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 2.2e-08 63.9 199 29.1
Hma1.2p1_0006F.1_g004680 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 2.2e-08 63.9 181 23.8
Sopen08g012630 Solanum pennellii HOM05D000096 ORTHO05D000045 2.2e-08 63.9 158 27.2
C02p33390 Brassica napus HOM05D000353 ORTHO05D015401 2.9e-08 63.5 140 32.1
AL1G26420 Arabidopsis lyrata HOM05D003358 ORTHO05D003864 3.8e-08 63.2 168 26.2
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 3.8e-08 63.2 172 27.3
BolC4t26686H Brassica oleracea HOM05D000353 ORTHO05D000174 5.0e-08 62.8 277 23.1
BraA05t22072Z Brassica rapa HOM05D000353 ORTHO05D000174 5.0e-08 62.8 173 27.2
Lalb_Chr21g0319461 Lupinus albus HOM05D002090 ORTHO05D001923 5.0e-08 62.8 140 30.7
A01p26990 Brassica napus HOM05D000353 ORTHO05D000174 6.5e-08 62.4 169 26.6
Glyma.19G107800 Glycine max HOM05D002090 ORTHO05D001923 6.5e-08 62.4 141 30.5
BcaB01g05982 Brassica carinata HOM05D000353 ORTHO05D000174 8.5e-08 62.0 140 30.0
A06p35790 Brassica napus HOM05D000353 ORTHO05D000174 8.5e-08 62.0 173 29.5
Solyc02g055533.1 Solanum lycopersicum HOM05D003235 ORTHO05D003863 8.5e-08 62.0 148 26.4
ECA236G4851 Erigeron canadensis HOM05D009731 ORTHO05D000045 1.1e-07 61.6 148 27.0
arahy.Tifrunner.gnm1.ann1.FH4NXK Arachis hypogaea HOM05D002441 ORTHO05D002376 1.4e-07 61.2 204 27.9
A10p31040 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 61.2 179 25.1
C04p41240 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 61.2 167 29.9
C05p33950 Brassica napus HOM05D000353 ORTHO05D000174 1.4e-07 61.2 197 25.9
PSO210G5825 Papaver somniferum HOM05D002907 ORTHO05D000174 1.4e-07 61.2 162 29.6
C04p16570 Brassica napus HOM05D000353 ORTHO05D000174 1.9e-07 60.8 197 25.9
BolC2t08345H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-07 60.8 197 25.9
BolC7t45258H Brassica oleracea HOM05D000353 ORTHO05D000174 1.9e-07 60.8 197 25.9
COL.COLO4_26586 Corchorus olitorius HOM05D007876 ORTHO05D007430 1.9e-07 60.8 139 25.2
Lalb_Chr09g0332281 Lupinus albus HOM05D002090 ORTHO05D001923 1.9e-07 60.8 127 27.6
Lalb_Chr09g0332511 Lupinus albus HOM05D002090 ORTHO05D001923 1.9e-07 60.8 138 29.7
Lalb_Chr02g0152971 Lupinus albus HOM05D002090 ORTHO05D001923 2.5e-07 60.5 124 28.2
Aqoxy1G02122 Aquilegia oxysepala HOM05D012322 ORTHO05D014819 3.2e-07 60.1 42 59.5
DCAR_017280 Daucus carota HOM05D002492 ORTHO05D002621 3.2e-07 60.1 177 25.4
C05p39980 Brassica napus HOM05D000353 ORTHO05D000174 4.2e-07 59.7 169 26.6
Lalb_Chr06g0171211 Lupinus albus HOM05D002090 ORTHO05D001923 4.2e-07 59.7 145 29.0
Lalb_Chr09g0332121 Lupinus albus HOM05D002090 ORTHO05D001923 4.2e-07 59.7 141 29.8
Medtr1g041830 Medicago truncatula HOM05D002090 ORTHO05D001923 4.2e-07 59.7 113 29.2
TWI14G1065 Tripterygium wilfordii HOM05D002907 ORTHO05D000065 4.2e-07 59.7 193 23.8
Lalb_Chr24g0402901 Lupinus albus HOM05D002090 ORTHO05D001923 5.5e-07 59.3 107 31.8
C09p48830 Brassica napus HOM05D011161 ORTHO05D026813 7.2e-07 58.9 130 33.8
DCAR_005243 Daucus carota HOM05D002492 ORTHO05D002621 7.2e-07 58.9 152 25.0
ECA233G1973 Erigeron canadensis HOM05D000353 ORTHO05D000174 7.2e-07 58.9 129 30.2
Lalb_Chr04g0253881 Lupinus albus HOM05D002090 ORTHO05D001923 7.2e-07 58.9 127 30.7
Lalb_Chr07g0192401 Lupinus albus HOM05D002090 ORTHO05D001923 7.2e-07 58.9 133 27.8
Medtr8g027910 Medicago truncatula HOM05D002090 ORTHO05D001923 7.2e-07 58.9 156 26.9
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 7.2e-07 58.9 145 26.9
Thecc.05G257800 Theobroma cacao HOM05D007876 ORTHO05D007430 7.2e-07 58.9 121 27.3
Glyma.02G178600 Glycine max HOM05D002090 ORTHO05D001923 9.4e-07 58.5 137 29.9
Os09g0456900 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D010433 9.4e-07 58.5 198 27.3
Medtr7g025160 Medicago truncatula HOM05D002090 ORTHO05D001923 1.2e-06 58.2 155 25.8
Medtr8g059025 Medicago truncatula HOM05D000353 ORTHO05D000174 1.2e-06 58.2 117 30.8
BraA05t20758Z Brassica rapa HOM05D000305 ORTHO05D000065 1.6e-06 57.8 150 23.3
BraA06t25441Z Brassica rapa HOM05D000353 ORTHO05D000174 1.6e-06 57.8 142 33.1
BraA02t07899Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-06 57.4 278 22.7
BraA09t37616Z Brassica rapa HOM05D000353 ORTHO05D000174 2.1e-06 57.4 142 33.1
Glyma.09G106000 Glycine max HOM05D002090 ORTHO05D001923 2.1e-06 57.4 148 29.1
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.7e-06 57.0 164 25.0
C03p63100 Brassica napus HOM05D000353 ORTHO05D000174 2.7e-06 57.0 179 26.3
COL.COLO4_36444 Corchorus olitorius HOM05D007876 ORTHO05D007430 2.7e-06 57.0 141 26.2
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 2.7e-06 57.0 195 23.6
SGA_v2.0_scaffold69G23109 Striga asiatica HOM05D011787 ORTHO05D008317 2.7e-06 57.0 140 27.1
arahy.Tifrunner.gnm1.ann1.19G1TH Arachis hypogaea HOM05D002441 ORTHO05D008317 3.6e-06 56.6 255 22.0
A03p67580 Brassica napus HOM05D000353 ORTHO05D000174 3.6e-06 56.6 140 28.6
BcaC06g33697 Brassica carinata HOM05D000353 ORTHO05D000174 4.7e-06 56.2 178 26.4
HanXRQChr05g0145091 Helianthus annuus HOM05D000353 ORTHO05D000174 4.7e-06 56.2 124 27.4
Lalb_Chr14g0362191 Lupinus albus HOM05D002090 ORTHO05D001923 4.7e-06 56.2 114 28.9
Medtr1g043690 Medicago truncatula HOM05D002090 ORTHO05D001923 4.7e-06 56.2 158 24.1
Solyc11g032020.1 Solanum lycopersicum HOM05D002907 ORTHO05D000065 4.7e-06 56.2 95 31.6
BcaC03g14334 Brassica carinata HOM05D000353 ORTHO05D000174 6.1e-06 55.8 167 25.1
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 6.1e-06 55.8 124 29.0
BraA01t02840Z Brassica rapa HOM05D000353 ORTHO05D000174 6.1e-06 55.8 179 25.7
COL.COLO4_36302 Corchorus olitorius HOM05D007876 ORTHO05D007430 6.1e-06 55.8 171 26.3
Glyma.10G114800 Glycine max HOM05D002090 ORTHO05D001923 6.1e-06 55.8 124 29.0
Os12g0511750 Oryza sativa ssp. japonica HOM05D008312 ORTHO05D010433 6.1e-06 55.8 129 25.6
BcaB03g14941 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-06 55.5 127 30.7
BcaC03g15824 Brassica carinata HOM05D000353 ORTHO05D000174 7.9e-06 55.5 178 26.4
Lsat_1_v5_gn_3_30460 Lactuca sativa HOM05D007823 ORTHO05D000174 7.9e-06 55.5 161 27.3
Lsat_1_v5_gn_6_72321 Lactuca sativa HOM05D007823 ORTHO05D000174 7.9e-06 55.5 161 27.3
Lsat_1_v5_gn_8_29300 Lactuca sativa HOM05D007823 ORTHO05D000174 7.9e-06 55.5 161 27.3
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 7.9e-06 55.5 101 30.7


User provided reference genes

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