Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02004 Aquilegia oxysepala HOM05D003411 ORTHO05D003914 2.9e-44 181.4 87 100.0
Aqoxy2G03916 Aquilegia oxysepala HOM05D003411 ORTHO05D003914 1.9e-30 135.6 100 70.0
CiPaw.02G063100 Carya illinoinensis HOM05D003411 ORTHO05D003914 5.6e-27 124.0 100 62.0
MD04G1018500 Malus domestica HOM05D003411 ORTHO05D003914 7.3e-27 123.6 100 64.0
TWI53G0146 Tripterygium wilfordii HOM05D003411 ORTHO05D003914 9.5e-27 123.2 95 65.3
Haze_11665 Corylus avellana HOM05D003411 ORTHO05D003914 1.2e-26 122.9 95 65.3
PSO063G3966 Papaver somniferum HOM05D003411 ORTHO05D003914 1.6e-26 122.5 97 62.9
CiPaw.02G062900 Carya illinoinensis HOM05D003411 ORTHO05D003914 2.1e-26 122.1 100 60.0
PGR083G0313 Punica granatum HOM05D003411 ORTHO05D003914 2.1e-26 122.1 100 62.0
RcHm_v2.0_Chr4g0413261 Rosa chinensis HOM05D003411 ORTHO05D003914 2.1e-26 122.1 100 62.0
Sabra16G0203800 Salix brachista HOM05D003411 ORTHO05D003914 2.1e-26 122.1 95 65.3
Sabra17G0053800 Salix brachista HOM05D003411 ORTHO05D003914 2.8e-26 121.7 95 64.2
FvH4_4g13170 Fragaria vesca HOM05D003411 ORTHO05D003914 3.6e-26 121.3 100 62.0
FAN12G0475 Fragaria x ananassa HOM05D003411 ORTHO05D003914 3.6e-26 121.3 100 62.0
Manes.01G003200 Manihot esculenta HOM05D003411 ORTHO05D003914 3.6e-26 121.3 96 62.5
Nn1g08155 Nelumbo nucifera HOM05D003411 ORTHO05D003914 3.6e-26 121.3 100 61.0
Potri.017G060000 Populus trichocarpa HOM05D003411 ORTHO05D003914 3.6e-26 121.3 95 64.2
QL06p026812 Quercus lobata HOM05D003411 ORTHO05D003914 4.7e-26 120.9 95 63.2
QL07p010164 Quercus lobata HOM05D003411 ORTHO05D003914 4.7e-26 120.9 95 63.2
ATR0602G172 Amborella trichopoda HOM05D003411 ORTHO05D003914 6.2e-26 120.6 100 61.0
Cfa008639 Carpinus fangiana HOM05D003411 ORTHO05D003914 6.2e-26 120.6 100 61.0
ECA233G4116 Erigeron canadensis HOM05D003411 ORTHO05D003914 6.2e-26 120.6 95 63.2
Gohir.A02G018400 Gossypium hirsutum HOM05D003411 ORTHO05D003914 6.2e-26 120.6 95 65.3
Lj6C367T9 Lonicera japonica HOM05D003411 ORTHO05D003914 6.2e-26 120.6 95 64.2
Dinv18405 Davidia involucrata HOM05D003411 ORTHO05D003914 8.1e-26 120.2 100 61.0
FAN07G1736 Fragaria x ananassa HOM05D003411 ORTHO05D003914 8.1e-26 120.2 100 62.0
Lsat_1_v5_gn_6_59580 Lactuca sativa HOM05D003411 ORTHO05D003914 8.1e-26 120.2 95 63.2
Prupe.1G167300 Prunus persica HOM05D003411 ORTHO05D003914 8.1e-26 120.2 100 62.0
TAR636G0144 Trochodendron aralioides HOM05D003411 ORTHO05D003914 8.1e-26 120.2 100 60.0
Zm00001eb143460 Zea mays HOM05D003411 ORTHO05D003914 8.1e-26 120.2 100 61.0
arahy.Tifrunner.gnm1.ann1.GXY8DM Arachis hypogaea HOM05D003411 ORTHO05D003914 1.1e-25 119.8 95 64.2
CSS0031323 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 1.1e-25 119.8 95 64.2
HanXRQChr07g0185571 Helianthus annuus HOM05D003411 ORTHO05D003914 1.1e-25 119.8 95 64.2
MBI07_g08879_MAGBIO Magnolia biondii HOM05D003411 ORTHO05D003914 1.1e-25 119.8 100 62.0
Atru.chr4.1551 Acer truncatum HOM05D003411 ORTHO05D003914 1.4e-25 119.4 95 64.2
arahy.Tifrunner.gnm1.ann1.E7M6AK Arachis hypogaea HOM05D003411 ORTHO05D003914 1.8e-25 119.0 96 63.5
Gohir.D02G021700 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.8e-25 119.0 95 64.2
Gohir.D10G137200 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.8e-25 119.0 95 62.1
Gorai.005G027200 Gossypium raimondii HOM05D003411 ORTHO05D003914 1.8e-25 119.0 95 64.2
Glyma.05G151300 Glycine max HOM05D003411 ORTHO05D003914 2.3e-25 118.6 96 63.5
Glyma.08G108000 Glycine max HOM05D003411 ORTHO05D003914 2.3e-25 118.6 96 63.5
arahy.Tifrunner.gnm1.ann1.MR4BJU Arachis hypogaea HOM05D003411 ORTHO05D003914 3.1e-25 118.2 95 63.2
CANSAT78G0444 Cannabis sativa HOM05D003411 ORTHO05D003914 3.1e-25 118.2 95 64.2
CiPaw.01G115300 Carya illinoinensis HOM05D003411 ORTHO05D003914 3.1e-25 118.2 95 62.1
Gorai.011G152400 Gossypium raimondii HOM05D003411 ORTHO05D003914 3.1e-25 118.2 95 62.1
Potri.001G321600 Populus trichocarpa HOM05D003411 ORTHO05D003914 3.1e-25 118.2 95 63.2
Duzib151G0297 Durio zibethinus HOM05D003411 ORTHO05D003914 4.0e-25 117.9 95 63.2
Phvul.001G265900 Phaseolus vulgaris HOM05D003411 ORTHO05D003914 4.0e-25 117.9 95 62.1
Lalb_Chr23g0278281 Lupinus albus HOM05D003411 ORTHO05D003914 6.8e-25 117.1 95 61.1
MSTRG.9788 Avicennia marina HOM05D003411 ORTHO05D003914 8.9e-25 116.7 95 62.1
Glyma.18G002800 Glycine max HOM05D003411 ORTHO05D003914 1.2e-24 116.3 95 63.2
Gohir.A10G128900 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.2e-24 116.3 96 60.4
Lj6g0005715 Lotus japonicus HOM05D003411 ORTHO05D003914 1.2e-24 116.3 95 63.2
Os01g0916400 Oryza sativa ssp. japonica HOM05D003411 ORTHO05D003914 1.2e-24 116.3 100 59.0
PSO017G0142 Papaver somniferum HOM05D003411 ORTHO05D003914 1.2e-24 116.3 97 59.8
Sp7g11830 Schrenkiella parvula HOM05D003411 ORTHO05D003914 1.2e-24 116.3 96 61.5
SEGI_38348 Sequoiadendron giganteum HOM05D003411 ORTHO05D003914 1.2e-24 116.3 97 60.8
Thecc.04G193400 Theobroma cacao HOM05D003411 ORTHO05D003914 1.2e-24 116.3 95 63.2
Actinidia35836 Actinidia chinensis HOM05D003411 ORTHO05D003914 1.5e-24 115.9 95 61.1
arahy.Tifrunner.gnm1.ann1.EMW6AM Arachis hypogaea HOM05D003411 ORTHO05D003914 1.5e-24 115.9 96 62.5
CAN.G1155.14 Capsicum annuum HOM05D003411 ORTHO05D003914 1.5e-24 115.9 96 60.4
DCAR_026664 Daucus carota HOM05D003411 ORTHO05D003914 1.5e-24 115.9 96 60.4
HanXRQChr02g0058461 Helianthus annuus HOM05D003411 ORTHO05D003914 1.5e-24 115.9 95 61.1
Sed0020137 Sechium edule HOM05D003411 ORTHO05D003914 1.5e-24 115.9 95 62.1
PGSC0003DMG400020582 Solanum tuberosum HOM05D003411 ORTHO05D003914 1.5e-24 115.9 96 60.4
TPR.G28943 Trifolium pratense HOM05D003411 ORTHO05D003914 1.5e-24 115.9 95 58.9
AT4G14030 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 2.0e-24 115.5 96 60.4
Duzib212G0817 Durio zibethinus HOM05D003411 ORTHO05D003914 2.0e-24 115.5 95 62.1
Eucgr.H02650 Eucalyptus grandis HOM05D003411 ORTHO05D003914 2.0e-24 115.5 95 61.1
Rhsim09G0061400 Rhododendron simsii HOM05D003411 ORTHO05D003914 2.0e-24 115.5 100 59.0
Carub.0007s2839 Capsella rubella HOM05D003411 ORTHO05D003914 2.6e-24 115.2 96 59.4
Cpa.g.sc157.38 Carica papaya HOM05D003411 ORTHO05D003914 2.6e-24 115.2 95 62.1
Glyma.11G254300 Glycine max HOM05D003411 ORTHO05D003914 2.6e-24 115.2 95 63.2
BcaB04g18106 Brassica carinata HOM05D003411 ORTHO05D003914 3.4e-24 114.8 96 60.4
Ca_16422_v3 Cicer arietinum L. HOM05D003411 ORTHO05D003914 3.4e-24 114.8 95 60.0
GSVIVG01021049001 Vitis vinifera HOM05D003411 ORTHO05D003914 3.4e-24 114.8 95 61.1
Aa31LG9G3320 Aethionema arabicum HOM05D003411 ORTHO05D003914 4.4e-24 114.4 96 59.4
CANSAT78G1476 Cannabis sativa HOM05D003411 ORTHO05D003914 4.4e-24 114.4 95 60.0
Carub.0003s2410 Capsella rubella HOM05D003411 ORTHO05D003914 4.4e-24 114.4 96 61.5
Thhalv10024991m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 4.4e-24 114.4 100 58.0
Sc07g0006160 Simmondsia chinensis HOM05D003411 ORTHO05D003914 4.4e-24 114.4 96 61.5
Carub.0007s2838 Capsella rubella HOM05D003411 ORTHO05D003914 5.8e-24 114.0 100 58.0
COL.COLO4_05435 Corchorus olitorius HOM05D003411 ORTHO05D003914 5.8e-24 114.0 95 62.1
MELO3C021162.2 Cucumis melo HOM05D003411 ORTHO05D003914 5.8e-24 114.0 95 61.1
CsaV3_6G001060 Cucumis sativus L. HOM05D003411 ORTHO05D003914 5.8e-24 114.0 95 61.1
Thhalv10002510m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 5.8e-24 114.0 96 61.5
AL7G42390 Arabidopsis lyrata HOM05D003411 ORTHO05D003914 7.5e-24 113.6 100 58.0
AL7G42400 Arabidopsis lyrata HOM05D003411 ORTHO05D003914 7.5e-24 113.6 96 57.3
AT4G14040 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 7.5e-24 113.6 100 58.0
EL10Ac3g07442 Beta vulgaris HOM05D003411 ORTHO05D003914 7.5e-24 113.6 96 61.5
CARHR099780 Cardamine hirsuta HOM05D003411 ORTHO05D003914 7.5e-24 113.6 95 62.1
CARHR220040 Cardamine hirsuta HOM05D003411 ORTHO05D003914 7.5e-24 113.6 96 59.4
PSO017G4415 Papaver somniferum HOM05D003411 ORTHO05D003914 7.5e-24 113.6 97 58.8
vmacro00433 Vaccinium macrocarpon HOM05D003411 ORTHO05D003914 7.5e-24 113.6 95 61.1
BcaC07g37697 Brassica carinata HOM05D003411 ORTHO05D003914 9.9e-24 113.2 96 59.4
Medtr3g084410 Medicago truncatula HOM05D003411 ORTHO05D003914 9.9e-24 113.2 95 60.0
Solyc09g092430.3 Solanum lycopersicum HOM05D003411 ORTHO05D003914 9.9e-24 113.2 96 59.4
Sopen09g035330 Solanum pennellii HOM05D003411 ORTHO05D003914 9.9e-24 113.2 96 59.4
THA.LOC104804791 Tarenaya hassleriana HOM05D003411 ORTHO05D003914 9.9e-24 113.2 95 60.0
THA.LOC104822225 Tarenaya hassleriana HOM05D003411 ORTHO05D003914 9.9e-24 113.2 95 60.0
VMungo1383G0705 Vigna mungo HOM05D003411 ORTHO05D003914 9.9e-24 113.2 95 60.0
BcaC02g09366 Brassica carinata HOM05D003411 ORTHO05D003914 1.7e-23 112.5 100 56.0
Thhalv10025040m.g Eutrema salsugineum HOM05D003411 ORTHO05D003914 1.7e-23 112.5 100 57.0
BcaB04g18107 Brassica carinata HOM05D003411 ORTHO05D003914 2.2e-23 112.1 100 57.0
BcaC07g37715 Brassica carinata HOM05D003411 ORTHO05D003914 2.2e-23 112.1 100 57.0
Hma1.2p1_0349F.1_g131970 Hydrangea macrophylla HOM05D003411 ORTHO05D003914 2.2e-23 112.1 96 61.5
Hma1.2p1_2624F.1_g325610 Hydrangea macrophylla HOM05D003411 ORTHO05D003914 2.2e-23 112.1 96 61.5
Sp7g11850 Schrenkiella parvula HOM05D003411 ORTHO05D003914 2.2e-23 112.1 100 57.0
SHI06459 Sapria himalayana HOM05D003411 ORTHO05D003914 2.9e-23 111.7 95 58.9
BcaB04g18108 Brassica carinata HOM05D003411 ORTHO05D003914 3.7e-23 111.3 100 56.0
CARHR220050 Cardamine hirsuta HOM05D003411 ORTHO05D003914 3.7e-23 111.3 96 58.3
AT3G23800 Arabidopsis thaliana HOM05D003411 ORTHO05D003914 4.9e-23 110.9 95 60.0
CDE07G1304 Ceratophyllum demersum HOM05D003411 ORTHO05D003914 4.9e-23 110.9 100 54.0
SalBow3G1551 Salvia bowleyana HOM05D003411 ORTHO05D003914 4.9e-23 110.9 95 58.9
Actinidia21264 Actinidia chinensis HOM05D003411 ORTHO05D003914 6.4e-23 110.5 95 58.9
BcaC02g09367 Brassica carinata HOM05D003411 ORTHO05D003914 6.4e-23 110.5 100 56.0
Gorai.005G027300 Gossypium raimondii HOM05D003411 ORTHO05D003914 1.1e-22 109.8 95 57.9
Psat5g099520 Pisum sativum HOM05D003411 ORTHO05D003914 1.1e-22 109.8 95 57.9
BcaB02g08636 Brassica carinata HOM05D003411 ORTHO05D003914 1.9e-22 109.0 100 55.0
BolC4t25759H Brassica oleracea HOM05D003411 ORTHO05D003914 2.4e-22 108.6 102 55.9
Hund19016 Selenicereus undatus HOM05D003411 ORTHO05D003914 2.4e-22 108.6 95 58.9
BcaB02g08638 Brassica carinata HOM05D003411 ORTHO05D003914 3.2e-22 108.2 102 56.9
Gohir.D02G021800 Gossypium hirsutum HOM05D003411 ORTHO05D003914 3.2e-22 108.2 95 56.8
Cc03_g09400 Coffea canephora HOM05D003411 ORTHO05D003914 4.1e-22 107.8 95 56.8
BcaC06g35570 Brassica carinata HOM05D003411 ORTHO05D003914 5.4e-22 107.5 94 59.6
A04p08100 Brassica napus HOM05D003411 ORTHO05D003914 5.4e-22 107.5 103 55.3
A07p08590 Brassica napus HOM05D003411 ORTHO05D003914 5.4e-22 107.5 94 59.6
C07p13410 Brassica napus HOM05D003411 ORTHO05D003914 5.4e-22 107.5 94 59.6
BolC7t41836H Brassica oleracea HOM05D003411 ORTHO05D003914 5.4e-22 107.5 94 59.6
BraA04t16498Z Brassica rapa HOM05D003411 ORTHO05D003914 5.4e-22 107.5 103 55.3
AUR62020875 Chenopodium quinoa HOM05D003411 ORTHO05D003914 5.4e-22 107.5 96 57.3
Gohir.A02G018500 Gossypium hirsutum HOM05D003411 ORTHO05D003914 5.4e-22 107.5 95 56.8
Ah.13g077880 Amaranthus hybridus HOM05D003411 ORTHO05D003914 7.1e-22 107.1 96 57.3
A08p10280 Brassica napus HOM05D003411 ORTHO05D003914 7.1e-22 107.1 102 55.9
BolC4t25757H Brassica oleracea HOM05D003411 ORTHO05D003914 7.1e-22 107.1 103 54.4
ClCG06G003230 Citrullus lanatus HOM05D003411 ORTHO05D003914 7.1e-22 107.1 104 55.8
Ciclev10004848m.g Citrus clementina HOM05D003411 ORTHO05D003914 7.1e-22 107.1 95 58.9
unitig_62.g23161 Utricularia gibba HOM05D003411 ORTHO05D003914 7.1e-22 107.1 100 54.0
BolC8t48094H Brassica oleracea HOM05D003411 ORTHO05D003914 9.2e-22 106.7 103 55.3
BraA08t33026Z Brassica rapa HOM05D003411 ORTHO05D003914 9.2e-22 106.7 103 55.3
Migut.N00427 Erythranthe guttata HOM05D003411 ORTHO05D003914 9.2e-22 106.7 95 58.9
A08p10260 Brassica napus HOM05D003411 ORTHO05D003914 1.2e-21 106.3 103 55.3
BraA08t33023Z Brassica rapa HOM05D003411 ORTHO05D003914 1.2e-21 106.3 103 55.3
Gohir.A02G018900 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.2e-21 106.3 95 57.9
Peaxi162Scf00286g01031 Petunia axillaris HOM05D003411 ORTHO05D003914 1.2e-21 106.3 115 51.3
A04p08110 Brassica napus HOM05D003411 ORTHO05D003914 1.6e-21 105.9 102 55.9
BraA04t16500Z Brassica rapa HOM05D003411 ORTHO05D003914 1.6e-21 105.9 102 55.9
BraA07t28648Z Brassica rapa HOM05D003411 ORTHO05D003914 1.6e-21 105.9 94 58.5
C04p41770 Brassica napus HOM05D003411 ORTHO05D003914 2.1e-21 105.5 102 54.9
BcaB06g26541 Brassica carinata HOM05D003411 ORTHO05D003914 2.7e-21 105.1 94 58.5
Gohir.A02G018300 Gossypium hirsutum HOM05D003411 ORTHO05D003914 2.7e-21 105.1 96 58.3
C04p41760 Brassica napus HOM05D003411 ORTHO05D003914 3.5e-21 104.8 103 54.4
Nitab4.5_0000451g0080 Nicotiana tabacum HOM05D003411 ORTHO05D003914 3.5e-21 104.8 66 71.2
BolC8t48088H Brassica oleracea HOM05D003411 ORTHO05D003914 4.6e-21 104.4 103 53.4
Gorai.005G027100 Gossypium raimondii HOM05D003411 ORTHO05D003914 6.0e-21 104.0 96 57.3
SMO230G0057 Selaginella moellendorffii HOM05D003411 ORTHO05D003914 6.0e-21 104.0 97 51.5
SGA_v2.0_scaffold19G08787 Striga asiatica HOM05D003411 ORTHO05D003914 6.0e-21 104.0 95 55.8
CDE04G2948 Ceratophyllum demersum HOM05D003411 ORTHO05D003914 7.8e-21 103.6 66 71.2
AUR62018543 Chenopodium quinoa HOM05D003411 ORTHO05D003914 7.8e-21 103.6 96 56.2
Gorai.005G027000 Gossypium raimondii HOM05D003411 ORTHO05D003914 1.0e-20 103.2 96 56.2
SalBow8G4879 Salvia bowleyana HOM05D003411 ORTHO05D003914 1.3e-20 102.8 96 51.0
Gohir.D02G021500 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.7e-20 102.4 96 56.2
Gohir.D02G021600 Gossypium hirsutum HOM05D003411 ORTHO05D003914 1.7e-20 102.4 96 56.2
Mapoly0004s0070 Marchantia polymorpha HOM05D003411 ORTHO05D003914 3.0e-20 101.7 66 74.2
BolC8t48092H Brassica oleracea HOM05D003411 ORTHO05D003914 3.9e-20 101.3 100 53.0
A08p10270 Brassica napus HOM05D003411 ORTHO05D003914 8.6e-20 100.1 100 52.0
BraA08t33025Z Brassica rapa HOM05D003411 ORTHO05D003914 8.6e-20 100.1 100 52.0
AagrBONN_evm.TU.Sc2ySwM_228.5065 Anthoceros agrestis HOM05D003411 ORTHO05D003914 2.1e-18 95.5 95 50.5
Cfa010561 Carpinus fangiana HOM05D003411 ORTHO05D003914 3.6e-18 94.7 100 51.0
Pp3c11_15680 Physcomitrium patens HOM05D003411 ORTHO05D003914 3.6e-18 94.7 66 66.7
BraA08t33024Z Brassica rapa HOM05D003411 ORTHO05D003914 3.1e-17 91.7 63 65.1
SalBow8G2610 Salvia bowleyana HOM05D003411 ORTHO05D003914 4.0e-17 91.3 96 42.7
CSS0027208 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 1.5e-16 89.4 83 56.6
arahy.Tifrunner.gnm1.ann1.85IK57 Arachis hypogaea HOM05D003411 ORTHO05D003914 5.8e-16 87.4 81 58.0
BcaC07g37696 Brassica carinata HOM05D003411 ORTHO05D003914 2.9e-15 85.1 66 60.6
arahy.Tifrunner.gnm1.ann1.2B3BHY Arachis hypogaea HOM05D003411 ORTHO05D003914 7.1e-14 80.5 49 77.6
CSS0017016 Camellia sinensis var. sinensis HOM05D003411 ORTHO05D003914 3.9e-12 74.7 62 64.5
Medtr8g083160 Medicago truncatula HOM05D003411 ORTHO05D003914 3.6e-10 68.2 64 54.7
Cre03.g166050 Chlamydomonas reinhardtii HOM05D003411 ORTHO05D003914 5.4e-06 54.3 58 43.1


User provided reference genes

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