Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G02002 Aquilegia oxysepala HOM05D004910 ORTHO05D006864 0.0e+00 4201.4 2194 100.0
TAR629G2465 Trochodendron aralioides HOM05D004910 ORTHO05D006864 0.0e+00 2724.9 2202 66.3
PSO782G5450 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 2508.0 2202 62.5
MBI04_g30775_MAGBIO Magnolia biondii HOM05D004910 ORTHO05D006864 0.0e+00 2432.9 2247 60.7
Cfa003693 Carpinus fangiana HOM05D004910 ORTHO05D006864 0.0e+00 2405.9 2192 61.1
Potri.013G071800 Populus trichocarpa HOM05D004910 ORTHO05D006864 0.0e+00 2376.7 2207 60.0
Dinv43524 Davidia involucrata HOM05D004910 ORTHO05D006864 0.0e+00 2338.5 2193 60.4
Thecc.05G234000 Theobroma cacao HOM05D004910 ORTHO05D006864 0.0e+00 2337.0 2205 59.2
GSVIVG01019298001 Vitis vinifera HOM05D004910 ORTHO05D006864 0.0e+00 2313.5 2241 58.5
Manes.08G157000 Manihot esculenta HOM05D004910 ORTHO05D006864 0.0e+00 2298.9 2200 58.1
Duzib177G0285 Durio zibethinus HOM05D004910 ORTHO05D006864 0.0e+00 2289.6 2207 58.7
CiPaw.02G046700 Carya illinoinensis HOM05D004910 ORTHO05D006864 0.0e+00 2276.9 2204 58.2
Prupe.2G105000 Prunus persica HOM05D004910 ORTHO05D006864 0.0e+00 2264.6 2194 59.0
RcHm_v2.0_Chr1g0342311 Rosa chinensis HOM05D004910 ORTHO05D006864 0.0e+00 2261.5 2195 58.5
FAN10G3403 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2249.6 2196 58.1
MD07G1080500 Malus domestica HOM05D004910 ORTHO05D006864 0.0e+00 2241.8 2199 58.5
TWI34G0933 Tripterygium wilfordii HOM05D004910 ORTHO05D006864 0.0e+00 2238.4 2220 56.4
Gorai.007G249800 Gossypium raimondii HOM05D004910 ORTHO05D006864 0.0e+00 2238.0 2219 57.3
FvH4_7g07740 Fragaria vesca HOM05D004910 ORTHO05D006864 0.0e+00 2232.6 2199 57.9
CANSAT25G1237 Cannabis sativa HOM05D004910 ORTHO05D006864 0.0e+00 2231.8 2199 57.4
FAN06G0636 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2221.8 2220 57.4
FAN03G0816 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2218.7 2218 57.3
Glyma.03G099800 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2202.2 2203 55.9
FAN01G0980 Fragaria x ananassa HOM05D004910 ORTHO05D006864 0.0e+00 2188.7 2303 55.4
Glyma.07G122900 Glycine max HOM05D004910 ORTHO05D006864 0.0e+00 2172.5 2208 55.5
Phvul.010G039700 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 2161.3 2205 55.1
Ciclev10030475m.g Citrus clementina HOM05D004910 ORTHO05D006864 0.0e+00 2149.0 2213 55.4
Rhsim07G0047300 Rhododendron simsii HOM05D004910 ORTHO05D006864 0.0e+00 2134.0 2034 57.2
Eucgr.D01069 Eucalyptus grandis HOM05D004910 ORTHO05D006864 0.0e+00 2116.3 2203 54.9
DCAR_029567 Daucus carota HOM05D004910 ORTHO05D006864 0.0e+00 2111.3 2216 54.2
Lj3g0022995 Lotus japonicus HOM05D004910 ORTHO05D006864 0.0e+00 2111.3 2209 54.0
MELO3C006215.2 Cucumis melo HOM05D004910 ORTHO05D006864 0.0e+00 2105.9 2205 55.6
Sed0008127 Sechium edule HOM05D004910 ORTHO05D006864 0.0e+00 2099.3 2209 55.4
Lalb_Chr07g0194851 Lupinus albus HOM05D004910 ORTHO05D006864 0.0e+00 2095.5 2202 54.5
Ca_25886_v3 Cicer arietinum L. HOM05D004910 ORTHO05D006864 0.0e+00 2093.9 2204 54.3
CsaV3_3G009930 Cucumis sativus L. HOM05D004910 ORTHO05D006864 0.0e+00 2091.2 2205 55.3
Nitab4.5_0006461g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2081.6 2206 54.3
TPR.G17367 Trifolium pratense HOM05D004910 ORTHO05D006864 0.0e+00 2075.4 2202 54.0
Medtr8g009780 Medicago truncatula HOM05D004910 ORTHO05D006864 0.0e+00 2072.4 2204 53.9
Nitab4.5_0000792g0070 Nicotiana tabacum HOM05D004910 ORTHO05D006864 0.0e+00 2070.8 2208 54.1
Cc08_g05600 Coffea canephora HOM05D004910 ORTHO05D006864 0.0e+00 2068.5 2199 52.8
Haze_15792 Corylus avellana HOM05D004910 ORTHO05D006864 0.0e+00 2042.3 1973 58.6
CAN.G992.20 Capsicum annuum HOM05D004910 ORTHO05D006864 0.0e+00 2033.8 2203 53.2
COL.COLO4_08664 Corchorus olitorius HOM05D004910 ORTHO05D006864 0.0e+00 2022.3 2194 54.1
SalBow4G1969 Salvia bowleyana HOM05D004910 ORTHO05D006864 0.0e+00 2020.0 2208 52.3
ATR0829G021 Amborella trichopoda HOM05D004910 ORTHO05D006864 0.0e+00 2001.1 2212 52.8
Sopen01g032990 Solanum pennellii HOM05D004910 ORTHO05D006864 0.0e+00 1984.9 2201 52.5
arahy.Tifrunner.gnm1.ann1.7UUD9R Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1975.7 2118 52.4
Lsat_1_v5_gn_4_42261 Lactuca sativa HOM05D004910 ORTHO05D006864 0.0e+00 1937.9 2201 51.5
ECA234G3354 Erigeron canadensis HOM05D004910 ORTHO05D006864 0.0e+00 1930.2 2179 52.0
vmacro13594 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 0.0e+00 1929.1 2137 51.4
ClCG05G002500 Citrullus lanatus HOM05D004910 ORTHO05D006864 0.0e+00 1923.3 2126 52.7
THA.LOC104805731 Tarenaya hassleriana HOM05D004910 ORTHO05D006864 0.0e+00 1908.3 2226 50.7
VMungo0331G1962 Vigna mungo HOM05D004910 ORTHO05D006864 0.0e+00 1907.9 2078 52.8
Migut.N01670 Erythranthe guttata HOM05D004910 ORTHO05D006864 0.0e+00 1906.0 2219 50.2
EL10Ac1g00665 Beta vulgaris HOM05D004910 ORTHO05D006864 0.0e+00 1897.1 2305 48.8
HanXRQChr15g0492621 Helianthus annuus HOM05D004910 ORTHO05D006864 0.0e+00 1885.2 2193 51.2
CSS0017393 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 0.0e+00 1876.7 1923 55.7
Gohir.D11G236600 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1837.0 1916 55.8
Gohir.A11G225700 Gossypium hirsutum HOM05D004910 ORTHO05D006864 0.0e+00 1833.2 1916 55.5
Hund26917 Selenicereus undatus HOM05D004910 ORTHO05D006864 0.0e+00 1803.5 2128 50.0
AL7G44770 Arabidopsis lyrata HOM05D004910 ORTHO05D006864 0.0e+00 1763.8 2203 49.3
Aa31LG9G17970 Aethionema arabicum HOM05D004910 ORTHO05D006864 0.0e+00 1752.6 2299 47.8
Lj9A617T56 Lonicera japonica HOM05D004910 ORTHO05D006864 0.0e+00 1738.0 1882 53.1
Ah.05g177140 Amaranthus hybridus HOM05D004910 ORTHO05D006864 0.0e+00 1736.1 2148 48.0
QL04p053216 Quercus lobata HOM05D004910 ORTHO05D006864 0.0e+00 1728.8 1698 57.5
SGA_v2.0_scaffold4G02226 Striga asiatica HOM05D004910 ORTHO05D006864 0.0e+00 1719.9 2050 49.3
Peaxi162Scf00907g00121 Petunia axillaris HOM05D004910 ORTHO05D006864 0.0e+00 1683.7 2020 49.8
Solyc01g081430.4 Solanum lycopersicum HOM05D004910 ORTHO05D006864 0.0e+00 1672.1 1982 50.7
Zm00001eb025470 Zea mays HOM05D004910 ORTHO05D006864 0.0e+00 1671.8 1983 47.8
CDE12G0362 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 0.0e+00 1537.3 1820 48.2
PGR083G1400 Punica granatum HOM05D004910 ORTHO05D006864 0.0e+00 1526.5 1560 53.5
AUR62038026 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1463.4 1779 49.9
Oeu002050.1 Olea europaea HOM05D004910 ORTHO05D006864 0.0e+00 1428.3 1689 51.0
Mapoly0032s0018 Marchantia polymorpha HOM05D004910 ORTHO05D006864 0.0e+00 1419.1 2300 40.0
Atru.chr2.1651 Acer truncatum HOM05D004910 ORTHO05D006864 0.0e+00 1318.5 1107 62.1
Sc26g0002020 Simmondsia chinensis HOM05D004910 ORTHO05D006864 0.0e+00 1318.5 1707 46.9
CARHR216720 Cardamine hirsuta HOM05D004910 ORTHO05D006864 0.0e+00 1317.8 1717 48.4
AUR62014509 Chenopodium quinoa HOM05D004910 ORTHO05D006864 0.0e+00 1312.0 1732 46.8
AagrBONN_evm.TU.Sc2ySwM_362.1947 Anthoceros agrestis HOM05D004910 ORTHO05D006864 0.0e+00 1285.8 1961 39.9
Pp3c7_26820 Physcomitrium patens HOM05D004910 ORTHO05D006864 0.0e+00 1277.7 2272 38.5
arahy.Tifrunner.gnm1.ann1.X9S6DI Arachis hypogaea HOM05D004910 ORTHO05D006864 0.0e+00 1241.9 1580 48.0
PSO063G2935 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 1223.0 968 66.1
PSO063G6831 Papaver somniferum HOM05D004910 ORTHO05D006864 0.0e+00 1138.6 1130 59.0
Atru.chr2.1650 Acer truncatum HOM05D004910 ORTHO05D006864 2.3e-294 1016.9 1042 58.4
SEGI_03249 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 3.9e-286 989.6 1390 41.5
Os04g0218600 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.0e-282 977.2 976 54.2
Cpa.g.sc73.58 Carica papaya HOM05D004910 ORTHO05D006864 1.7e-281 974.2 1038 53.0
Psat4g216280 Pisum sativum HOM05D004910 ORTHO05D006864 1.4e-280 971.1 1332 44.7
arahy.Tifrunner.gnm1.ann1.L1X5S4 Arachis hypogaea HOM05D004910 ORTHO05D006864 1.6e-266 924.5 1157 48.5
CBR_g49462 Chara braunii HOM05D004910 ORTHO05D006864 5.1e-225 786.6 2727 27.7
SMO347G0286 Selaginella moellendorffii HOM05D004910 ORTHO05D006864 3.8e-212 743.8 1465 33.9
Actinidia21201 Actinidia chinensis HOM05D004910 ORTHO05D006864 4.9e-204 716.8 888 46.6
QL04p053202 Quercus lobata HOM05D004910 ORTHO05D006864 5.4e-203 713.4 511 70.8
unitig_578.g16705 Utricularia gibba HOM05D004910 ORTHO05D006864 1.1e-198 699.1 634 56.6
Psat4g215960 Pisum sativum HOM05D004910 ORTHO05D006864 2.7e-178 631.3 512 63.1
Hma1.2p1_0353F.1_g133240 Hydrangea macrophylla HOM05D004910 ORTHO05D006864 8.0e-154 550.1 415 67.5
arahy.Tifrunner.gnm1.ann1.2JI1W5 Arachis hypogaea HOM05D004910 ORTHO05D006864 6.8e-129 467.2 383 61.4
CSS0010640 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 8.6e-116 423.7 347 63.7
PGR083G0666 Punica granatum HOM05D004910 ORTHO05D006864 2.7e-109 402.1 575 47.8
AUR62014510 Chenopodium quinoa HOM05D004910 ORTHO05D006864 1.0e-108 400.2 410 52.9
AUR62038025 Chenopodium quinoa HOM05D004910 ORTHO05D006864 3.3e-107 395.2 411 53.5
Prupe.2G100700 Prunus persica HOM05D004910 ORTHO05D006864 5.1e-100 371.3 352 56.5
Actinidia21200 Actinidia chinensis HOM05D004910 ORTHO05D006864 7.6e-96 357.5 349 57.9
Cpa.g.sc73.62 Carica papaya HOM05D004910 ORTHO05D006864 1.4e-94 353.2 219 78.5
Solyc01g081420.3 Solanum lycopersicum HOM05D004910 ORTHO05D006864 1.9e-91 342.8 219 74.9
Peaxi162Scf00907g00123 Petunia axillaris HOM05D004910 ORTHO05D006864 2.7e-85 322.4 233 68.2
Haze_15794 Corylus avellana HOM05D004910 ORTHO05D006864 3.8e-79 302.0 186 77.4
Actinidia31737 Actinidia chinensis HOM05D004910 ORTHO05D006864 2.1e-74 286.2 556 37.4
CDE12G0963 Ceratophyllum demersum HOM05D004910 ORTHO05D006864 1.3e-66 260.4 384 53.1
Cpa.g.sc73.57 Carica papaya HOM05D004910 ORTHO05D006864 4.6e-61 241.9 356 52.8
AagrBONN_evm.TU.Sc2ySwM_117.2552 Anthoceros agrestis HOM05D004910 ORTHO05D006864 1.3e-60 240.4 207 59.4
Psat4g216320 Pisum sativum HOM05D004910 ORTHO05D006864 1.3e-55 223.8 311 56.3
Cpa.g.sc73.59 Carica papaya HOM05D004910 ORTHO05D006864 1.4e-54 220.3 261 49.0
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 3.2e-54 219.2 131 77.9
Gohir.A11G225602 Gossypium hirsutum HOM05D004910 ORTHO05D006864 6.3e-50 204.9 148 67.6
CSS0011325 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.7e-39 170.2 134 61.2
PGSC0003DMG400031109 Solanum tuberosum HOM05D004910 ORTHO05D006864 5.5e-38 165.2 209 54.1
Rhsim07G0047400 Rhododendron simsii HOM05D004910 ORTHO05D006864 2.1e-37 163.3 169 62.1
CSS0036242 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 2.7e-37 162.9 120 70.8
CSS0010022 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 3.6e-37 162.5 120 70.0
vmacro13596 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 4.7e-37 162.2 176 60.2
CSS0002002 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.0e-31 144.4 73 87.7
CSS0008041 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 1.0e-31 144.4 73 87.7
SEGI_03420 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 4.2e-30 139.0 187 49.2
Lj9A617T57 Lonicera japonica HOM05D004910 ORTHO05D006864 1.6e-29 137.1 147 61.2
Os10g0581000 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 2.7e-29 136.3 343 42.0
Psat6g100000 Pisum sativum HOM05D004910 ORTHO05D030483 1.4e-28 134.0 218 40.4
SEGI_03241 Sequoiadendron giganteum HOM05D004910 ORTHO05D006864 5.7e-27 128.6 95 67.4
Actinidia21203 Actinidia chinensis HOM05D004910 ORTHO05D006864 8.3e-26 124.8 64 85.9
RcHm_v2.0_Chr4g0408121 Rosa chinensis HOM05D004910 ORTHO05D006864 1.4e-20 107.5 85 63.5
FvH4_1g21580 Fragaria vesca HOM05D004910 ORTHO05D045425 8.8e-20 104.8 136 46.3
RcHm_v2.0_Chr4g0407941 Rosa chinensis HOM05D004910 ORTHO05D019205 3.1e-17 96.3 65 69.2
Os04g0218701 Oryza sativa ssp. japonica HOM05D004910 ORTHO05D006864 9.2e-17 94.7 384 37.0
Psat0s999g0120 Pisum sativum HOM05D004910 ORTHO05D030483 3.8e-15 89.4 148 37.8
CSS0032650 Camellia sinensis var. sinensis HOM05D004910 ORTHO05D006864 6.6e-15 88.6 60 73.3
Dinv00622 Davidia involucrata HOM05D004910 ORTHO05D006864 1.1e-14 87.8 82 57.3
vmacro13595 Vaccinium macrocarpon HOM05D004910 ORTHO05D006864 5.6e-14 85.5 82 74.4
ClCG00G006380 Citrullus lanatus HOM05D004910 ORTHO05D006864 1.4e-12 80.9 56 69.6
Nitab4.5_0011076g0010 Nicotiana tabacum HOM05D004910 ORTHO05D006864 4.0e-12 79.3 58 67.2
Gohir.D06G038650 Gossypium hirsutum HOM05D004910 ORTHO05D030909 9.2e-09 68.2 55 56.4
FAN23G3082 Fragaria x ananassa HOM05D004910 ORTHO05D045425 7.8e-08 65.1 66 54.5
Actinidia21202 Actinidia chinensis HOM05D004910 ORTHO05D030909 2.3e-07 63.5 49 69.4
FAN03G1104 Fragaria x ananassa HOM05D004910 ORTHO05D019205 2.3e-07 63.5 54 55.6
Phvul.010G039400 Phaseolus vulgaris HOM05D004910 ORTHO05D006864 3.0e-07 63.2 32 81.2
Gohir.D06G038000 Gossypium hirsutum HOM05D004910 ORTHO05D030909 4.3e-06 59.3 50 56.0


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