Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01922 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 4.8e-60 234.6 143 100.0
Aqoxy1G02059 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 2.7e-34 149.1 133 81.2
Aqoxy2G01619 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 5.0e-33 144.8 112 91.1
Nn1g09121 Nelumbo nucifera HOM05D000815 ORTHO05D000636 1.2e-18 97.1 127 62.2
TAR629G0571 Trochodendron aralioides HOM05D000815 ORTHO05D000636 4.7e-15 85.1 127 59.1
MBI06_g08591_MAGBIO Magnolia biondii HOM05D000815 ORTHO05D000636 2.0e-13 79.7 123 61.0
Actinidia16795 Actinidia chinensis HOM05D000815 ORTHO05D000636 9.9e-13 77.4 116 47.4
SGA_v2.0_scaffold12G06108 Striga asiatica HOM05D000815 ORTHO05D000636 9.9e-13 77.4 122 49.2
Solyc02g076810.4 Solanum lycopersicum HOM05D000815 ORTHO05D000636 2.9e-12 75.9 117 53.8
Sopen02g021710 Solanum pennellii HOM05D000815 ORTHO05D000636 2.9e-12 75.9 117 53.8
Dinv40679 Davidia involucrata HOM05D000815 ORTHO05D000636 4.9e-12 75.1 125 47.2
Nn5g29989 Nelumbo nucifera HOM05D000815 ORTHO05D000636 6.4e-12 74.7 117 45.3
PGSC0003DMG400010197 Solanum tuberosum HOM05D000815 ORTHO05D000636 3.2e-11 72.4 119 50.4
CSS0043386 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 9.2e-11 70.9 115 53.9
Lj1P1192T26 Lonicera japonica HOM05D000815 ORTHO05D000636 9.2e-11 70.9 117 47.0
CDE10G0436 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 2.7e-10 69.3 126 51.6
TWI38G1375 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 3.5e-10 68.9 117 59.8
CDE10G0137 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 4.6e-10 68.6 128 49.2
MSTRG.13222 Avicennia marina HOM05D000815 ORTHO05D000636 1.3e-09 67.0 132 50.0
TWI63G0072 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 1.7e-09 66.6 119 60.5
Lj8A101T44 Lonicera japonica HOM05D000815 ORTHO05D000636 3.0e-09 65.9 110 58.2
Oeu041768.1 Olea europaea HOM05D000815 ORTHO05D000636 3.0e-09 65.9 133 43.6
SalBow8G0414 Salvia bowleyana HOM05D000815 ORTHO05D000636 3.0e-09 65.9 127 48.8
vmacro16066 Vaccinium macrocarpon HOM05D000815 ORTHO05D000636 3.0e-09 65.9 135 49.6
Nitab4.5_0000605g0160 Nicotiana tabacum HOM05D000815 ORTHO05D000636 3.9e-09 65.5 124 50.0
PSO229G0085 Papaver somniferum HOM05D000815 ORTHO05D000636 3.9e-09 65.5 145 43.4
CSS0040066 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 5.1e-09 65.1 112 43.8
ECA248G0401 Erigeron canadensis HOM05D000815 ORTHO05D000636 6.6e-09 64.7 144 44.4
TAR626G0720 Trochodendron aralioides HOM05D000815 ORTHO05D000636 6.6e-09 64.7 129 52.7
MSTRG.14734 Avicennia marina HOM05D000815 ORTHO05D000636 8.6e-09 64.3 123 36.6
Cfa000610 Carpinus fangiana HOM05D000815 ORTHO05D000636 8.6e-09 64.3 125 52.8
Haze_06228 Corylus avellana HOM05D000815 ORTHO05D000636 8.6e-09 64.3 125 52.8
Hma1.2p1_0178F.1_g078790 Hydrangea macrophylla HOM05D000815 ORTHO05D000636 1.1e-08 63.9 109 55.0
Lj2A301T55 Lonicera japonica HOM05D000815 ORTHO05D000636 1.1e-08 63.9 100 55.0
Migut.H01434 Erythranthe guttata HOM05D000815 ORTHO05D000636 1.5e-08 63.5 133 47.4
Lsat_1_v5_gn_5_157100 Lactuca sativa HOM05D000815 ORTHO05D000636 1.5e-08 63.5 140 52.9
SGA_v2.0_scaffold16G07683 Striga asiatica HOM05D000815 ORTHO05D000636 1.9e-08 63.2 130 48.5
MSTRG.16152 Avicennia marina HOM05D000815 ORTHO05D000636 3.3e-08 62.4 124 41.1
TWI60G0759 Tripterygium wilfordii HOM05D000815 ORTHO05D000636 3.3e-08 62.4 124 55.6
Ca_18875_v3 Cicer arietinum L. HOM05D000815 ORTHO05D000636 4.3e-08 62.0 120 55.8
Sabra03G0082600 Salix brachista HOM05D000015 ORTHO05D000636 4.3e-08 62.0 121 51.2
CiPaw.09G070000 Carya illinoinensis HOM05D000815 ORTHO05D000636 7.3e-08 61.2 119 52.9
Manes.17G056000 Manihot esculenta HOM05D000815 ORTHO05D000636 7.3e-08 61.2 125 54.4
SalBow4G1589 Salvia bowleyana HOM05D000815 ORTHO05D000636 7.3e-08 61.2 93 57.0
Gohir.A10G037000 Gossypium hirsutum HOM05D000815 ORTHO05D000636 1.2e-07 60.5 107 57.9
Gohir.D10G037600 Gossypium hirsutum HOM05D000815 ORTHO05D000636 1.2e-07 60.5 107 57.9
Gorai.011G039600 Gossypium raimondii HOM05D000815 ORTHO05D000636 1.2e-07 60.5 107 57.9
SHI19433 Sapria himalayana HOM05D000815 ORTHO05D000636 1.2e-07 60.5 119 48.7
Duzib235G0969 Durio zibethinus HOM05D000815 ORTHO05D000636 1.6e-07 60.1 114 50.0
CsaV3_UNG085670 Cucumis sativus L. HOM05D000815 ORTHO05D000636 2.1e-07 59.7 122 52.5
Peaxi162Scf00384g00416 Petunia axillaris HOM05D000815 ORTHO05D000636 2.8e-07 59.3 118 49.2
MSTRG.7410 Avicennia marina HOM05D000815 ORTHO05D000636 3.6e-07 58.9 133 44.4
Duzib192G0497 Durio zibethinus HOM05D000815 ORTHO05D000636 3.6e-07 58.9 104 48.1
Migut.M01037 Erythranthe guttata HOM05D000815 ORTHO05D000636 3.6e-07 58.9 144 50.7
HanXRQChr01g0008201 Helianthus annuus HOM05D000815 ORTHO05D000636 3.6e-07 58.9 149 49.0
Manes.16G040100 Manihot esculenta HOM05D000815 ORTHO05D000636 3.6e-07 58.9 127 52.8
SGA_v2.0_scaffold1G00048 Striga asiatica HOM05D000815 ORTHO05D000636 3.6e-07 58.9 126 45.2
MSTRG.15090 Avicennia marina HOM05D000815 ORTHO05D000636 4.7e-07 58.5 42 69.0
Lalb_Chr20g0117461 Lupinus albus HOM05D000815 ORTHO05D000636 4.7e-07 58.5 139 38.8
Aqoxy4G00340 Aquilegia oxysepala HOM05D000815 ORTHO05D000636 6.2e-07 58.2 47 57.4
Psat1g197960 Pisum sativum HOM05D000815 ORTHO05D000636 6.2e-07 58.2 136 50.7
PGSC0003DMG400007806 Solanum tuberosum HOM05D000815 ORTHO05D000636 6.2e-07 58.2 134 40.3
TAR624G0889 Trochodendron aralioides HOM05D000815 ORTHO05D000636 6.2e-07 58.2 133 42.9
PGR042G0710 Punica granatum HOM05D000815 ORTHO05D000636 8.1e-07 57.8 115 53.9
Actinidia11156 Actinidia chinensis HOM05D000815 ORTHO05D000636 1.1e-06 57.4 122 40.2
EL10Ac8g20595 Beta vulgaris HOM05D000815 ORTHO05D000636 1.1e-06 57.4 131 48.9
Potri.003G118600 Populus trichocarpa HOM05D000815 ORTHO05D000636 1.4e-06 57.0 121 52.9
QL08p041784 Quercus lobata HOM05D000815 ORTHO05D000636 1.4e-06 57.0 120 45.0
Thecc.06G170300 Theobroma cacao HOM05D000815 ORTHO05D000636 1.4e-06 57.0 112 58.0
Solyc12g010890.2 Solanum lycopersicum HOM05D000815 ORTHO05D000636 1.8e-06 56.6 134 39.6
Sopen12g006250 Solanum pennellii HOM05D000815 ORTHO05D000636 1.8e-06 56.6 134 40.3
GSVIVG01021218001 Vitis vinifera HOM05D001767 ORTHO05D001714 2.4e-06 56.2 46 58.7
CDE04G1978 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 3.1e-06 55.8 48 56.2
Nitab4.5_0001923g0040 Nicotiana tabacum HOM05D000815 ORTHO05D000636 3.1e-06 55.8 44 61.4
CSS0044216 Camellia sinensis var. sinensis HOM05D000815 ORTHO05D000636 4.0e-06 55.5 137 46.7
Cpa.g.sc7.72 Carica papaya HOM05D000815 ORTHO05D000636 4.0e-06 55.5 117 47.9
CiPaw.10G059200 Carya illinoinensis HOM05D000815 ORTHO05D000636 4.0e-06 55.5 118 53.4
Cc02_g15010 Coffea canephora HOM05D000815 ORTHO05D000636 4.0e-06 55.5 107 54.2
HPP92_024042 Vanilla planifolia HOM05D000815 ORTHO05D000636 4.0e-06 55.5 149 39.6
CiPaw.03G195300 Carya illinoinensis HOM05D000815 ORTHO05D000636 6.8e-06 54.7 41 65.9
Lalb_Chr19g0134871 Lupinus albus HOM05D000815 ORTHO05D000636 6.8e-06 54.7 124 41.1
PSO675G0634 Papaver somniferum HOM05D000815 ORTHO05D000636 6.8e-06 54.7 145 38.6
Hund07793 Selenicereus undatus HOM05D000815 ORTHO05D000636 6.8e-06 54.7 109 46.8
ATR0602G048 Amborella trichopoda HOM05D000815 ORTHO05D000636 8.9e-06 54.3 121 37.2
CDE07G1405 Ceratophyllum demersum HOM05D000815 ORTHO05D000636 8.9e-06 54.3 49 53.1
Dinv15430 Davidia involucrata HOM05D000815 ORTHO05D000636 8.9e-06 54.3 137 44.5
Lj3g0000231 Lotus japonicus HOM05D000815 ORTHO05D000636 8.9e-06 54.3 139 42.4


User provided reference genes

Program Settings