Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01846 Aquilegia oxysepala HOM05D002321 ORTHO05D007292 2.0e-73 278.9 131 100.0
Aqoxy7G00905 Aquilegia oxysepala HOM05D002321 ORTHO05D007292 1.8e-53 212.6 112 90.2
Nn7g37396 Nelumbo nucifera HOM05D002321 ORTHO05D007292 3.7e-14 82.0 113 44.2
Rhsim11G0035800 Rhododendron simsii HOM05D002321 ORTHO05D007292 2.6e-12 75.9 113 41.6
TAR636G3608 Trochodendron aralioides HOM05D002321 ORTHO05D007292 3.4e-12 75.5 105 42.9
CSS0026909 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D007292 4.5e-12 75.1 111 39.6
CSS0039841 Camellia sinensis var. sinensis HOM05D002321 ORTHO05D007292 7.6e-12 74.3 111 36.9
EL10Ac6g14612 Beta vulgaris HOM05D002321 ORTHO05D007292 1.0e-11 73.9 106 36.8
GSVIVG01020479001 Vitis vinifera HOM05D002321 ORTHO05D007292 1.7e-11 73.2 111 38.7
Dinv41810 Davidia involucrata HOM05D002321 ORTHO05D007292 3.8e-11 72.0 113 38.1
Ah.10g034370 Amaranthus hybridus HOM05D002321 ORTHO05D007292 6.5e-11 71.2 113 39.8
PSO502G0020 Papaver somniferum HOM05D002321 ORTHO05D007292 3.2e-10 68.9 106 34.9
Gohir.A08G149900 Gossypium hirsutum HOM05D002321 ORTHO05D007292 7.2e-10 67.8 106 37.7
PSO675G6664 Papaver somniferum HOM05D002321 ORTHO05D007292 9.3e-10 67.4 106 34.0
Sc07g0007960 Simmondsia chinensis HOM05D002321 ORTHO05D007292 2.1e-09 66.2 120 35.8
EL10Ac6g14606 Beta vulgaris HOM05D002321 ORTHO05D007292 2.7e-09 65.9 117 32.5
Hund11035 Selenicereus undatus HOM05D002321 ORTHO05D007292 2.7e-09 65.9 113 35.4
AUR62010476 Chenopodium quinoa HOM05D002321 ORTHO05D007292 3.5e-09 65.5 113 39.8
AUR62030420 Chenopodium quinoa HOM05D002321 ORTHO05D007292 3.5e-09 65.5 115 35.7
Gohir.D08G171000 Gossypium hirsutum HOM05D002321 ORTHO05D007292 3.5e-09 65.5 106 36.8
Gorai.004G178400 Gossypium raimondii HOM05D002321 ORTHO05D007292 3.5e-09 65.5 106 36.8
PGR031G1597 Punica granatum HOM05D002321 ORTHO05D007292 7.9e-09 64.3 81 42.0
Atru.chr8.2639 Acer truncatum HOM05D002321 ORTHO05D007292 1.3e-08 63.5 107 32.7
Atru.chr8.2642 Acer truncatum HOM05D002321 ORTHO05D007292 1.3e-08 63.5 107 32.7
Prupe.1G352800 Prunus persica HOM05D002321 ORTHO05D007292 1.3e-08 63.5 76 42.1
Thecc.03G318100 Theobroma cacao HOM05D002321 ORTHO05D007292 1.3e-08 63.5 93 38.7
Eucgr.D02553 Eucalyptus grandis HOM05D002321 ORTHO05D007292 1.8e-08 63.2 94 41.5
Duzib068G1479 Durio zibethinus HOM05D002321 ORTHO05D007292 2.3e-08 62.8 106 35.8
Actinidia32784 Actinidia chinensis HOM05D002321 ORTHO05D007292 3.0e-08 62.4 82 40.2
Zm00001eb143370 Zea mays HOM05D002321 ORTHO05D007292 3.9e-08 62.0 103 35.0
VMungo1215G0605 Vigna mungo HOM05D002321 ORTHO05D007292 6.7e-08 61.2 108 35.2
BcaB01g01050 Brassica carinata HOM05D002321 ORTHO05D007292 1.1e-07 60.5 106 34.9
CANSAT01G1510 Cannabis sativa HOM05D002321 ORTHO05D007292 1.1e-07 60.5 92 37.0
Lj8A345G17 Lonicera japonica HOM05D002321 ORTHO05D007292 1.9e-07 59.7 77 40.3
MD08G1000800 Malus domestica HOM05D002321 ORTHO05D007292 1.9e-07 59.7 75 41.3
arahy.Tifrunner.gnm1.ann1.MGL5WV Arachis hypogaea HOM05D002321 ORTHO05D007292 2.5e-07 59.3 74 41.9
arahy.Tifrunner.gnm1.ann1.RTC3FZ Arachis hypogaea HOM05D002321 ORTHO05D007292 2.5e-07 59.3 74 41.9
Manes.11G092600 Manihot esculenta HOM05D002321 ORTHO05D007292 2.5e-07 59.3 111 35.1
SEGI_13820 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 2.5e-07 59.3 134 27.6
RcHm_v2.0_Chr6g0304441 Rosa chinensis HOM05D002321 ORTHO05D007292 3.3e-07 58.9 92 35.9
Cfa020521 Carpinus fangiana HOM05D002321 ORTHO05D007292 5.7e-07 58.2 73 45.2
Sabra01G0135600 Salix brachista HOM05D002321 ORTHO05D007292 5.7e-07 58.2 88 36.4
THA.LOC104814396 Tarenaya hassleriana HOM05D002321 ORTHO05D007292 5.7e-07 58.2 107 31.8
COL.COLO4_10363 Corchorus olitorius HOM05D002321 ORTHO05D007292 7.4e-07 57.8 75 38.7
Lsat_1_v5_gn_5_56941 Lactuca sativa HOM05D002321 ORTHO05D007292 9.7e-07 57.4 114 32.5
Os04g0290800 Oryza sativa ssp. japonica HOM05D002321 ORTHO05D007292 9.7e-07 57.4 81 37.0
Sopen08g001590 Solanum pennellii HOM05D002321 ORTHO05D007292 9.7e-07 57.4 108 32.4
Haze_09515 Corylus avellana HOM05D002321 ORTHO05D007292 1.3e-06 57.0 73 46.6
Phvul.002G120300 Phaseolus vulgaris HOM05D002321 ORTHO05D007292 1.6e-06 56.6 113 36.3
RcHm_v2.0_Chr6g0304461 Rosa chinensis HOM05D002321 ORTHO05D024921 1.6e-06 56.6 92 34.8
ECA240G2715 Erigeron canadensis HOM05D002321 ORTHO05D007292 2.2e-06 56.2 110 31.8
HPP92_011476 Vanilla planifolia HOM05D002321 ORTHO05D007292 2.2e-06 56.2 72 40.3
CiPaw.03G266200 Carya illinoinensis HOM05D002321 ORTHO05D007292 2.8e-06 55.8 73 39.7
Aa31LG9G15700 Aethionema arabicum HOM05D002321 ORTHO05D007292 3.7e-06 55.5 109 33.0
CDE02G1030 Ceratophyllum demersum HOM05D002321 ORTHO05D007292 3.7e-06 55.5 107 36.4
PGSC0003DMG400018482 Solanum tuberosum HOM05D002321 ORTHO05D007292 3.7e-06 55.5 109 32.1
Solyc08g005570.4 Solanum lycopersicum HOM05D002321 ORTHO05D007292 6.3e-06 54.7 108 31.5


User provided reference genes

Program Settings