Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01790 Aquilegia oxysepala HOM05D006936 ORTHO05D008273 8.8e-105 383.6 195 100.0
Eucgr.F03471 Eucalyptus grandis HOM05D006936 ORTHO05D008273 4.4e-64 248.4 195 68.7
Hma1.2p1_0738F.1_g211120 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 9.8e-64 247.3 195 68.2
Hma1.2p1_2518F.1_g323766 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 9.8e-64 247.3 195 68.2
TAR624G1327 Trochodendron aralioides HOM05D006936 ORTHO05D008273 8.3e-63 244.2 196 67.3
GSVIVG01037658001 Vitis vinifera HOM05D006936 ORTHO05D008273 1.4e-62 243.4 195 65.6
RcHm_v2.0_Chr5g0040171 Rosa chinensis HOM05D006936 ORTHO05D008273 1.6e-61 240.0 195 64.6
Ciclev10009642m.g Citrus clementina HOM05D006936 ORTHO05D008273 5.9e-61 238.0 195 64.6
Gohir.D01G067300 Gossypium hirsutum HOM05D006936 ORTHO05D008273 1.0e-60 237.3 195 65.1
CiPaw.11G190300 Carya illinoinensis HOM05D006936 ORTHO05D008273 1.3e-60 236.9 193 64.8
Gorai.002G089200 Gossypium raimondii HOM05D006936 ORTHO05D008273 1.7e-60 236.5 195 65.1
Thecc.07G035400 Theobroma cacao HOM05D006936 ORTHO05D008273 1.7e-60 236.5 195 63.6
Cpa.g.sc12.300 Carica papaya HOM05D006936 ORTHO05D008273 5.0e-60 235.0 195 62.6
Prupe.4G214700 Prunus persica HOM05D006936 ORTHO05D008273 4.3e-59 231.9 195 62.6
PSO832G3825 Papaver somniferum HOM05D006936 ORTHO05D008273 1.6e-58 229.9 195 61.0
Duzib213G0701 Durio zibethinus HOM05D006936 ORTHO05D008273 3.6e-58 228.8 195 63.6
FvH4_3g22870 Fragaria vesca HOM05D006936 ORTHO05D008273 3.6e-58 228.8 195 65.1
FAN11G3489 Fragaria x ananassa HOM05D006936 ORTHO05D008273 3.6e-58 228.8 195 65.1
FAN21G0204 Fragaria x ananassa HOM05D006936 ORTHO05D008273 4.7e-58 228.4 195 65.1
Gohir.A01G080100 Gossypium hirsutum HOM05D006936 ORTHO05D008273 4.7e-58 228.4 195 64.1
CSS0049611 Camellia sinensis var. sinensis HOM05D006936 ORTHO05D008273 8.0e-58 227.6 198 62.6
PSO210G5704 Papaver somniferum HOM05D006936 ORTHO05D008273 1.8e-57 226.5 204 58.8
Potri.003G122100 Populus trichocarpa HOM05D006936 ORTHO05D008273 3.1e-57 225.7 196 60.7
Haze_09683 Corylus avellana HOM05D006936 ORTHO05D008273 4.0e-57 225.3 196 59.2
Glyma.18G095900 Glycine max HOM05D006936 ORTHO05D008273 5.2e-57 224.9 194 61.3
Manes.03G129900 Manihot esculenta HOM05D006936 ORTHO05D008273 1.2e-56 223.8 195 61.0
SGA_v2.0_scaffold8G04322 Striga asiatica HOM05D006936 ORTHO05D008273 1.5e-56 223.4 195 62.6
Carub.0007s1390 Capsella rubella HOM05D006936 ORTHO05D008273 2.0e-56 223.0 193 60.6
CsaV3_3G005130 Cucumis sativus L. HOM05D006936 ORTHO05D008273 2.0e-56 223.0 195 63.1
Phvul.006G044500 Phaseolus vulgaris HOM05D006936 ORTHO05D008273 2.0e-56 223.0 195 62.6
AL7G25870 Arabidopsis lyrata HOM05D006936 ORTHO05D008273 2.6e-56 222.6 193 62.2
BcaNung03571 Brassica carinata HOM05D006936 ORTHO05D008273 2.6e-56 222.6 193 61.1
TWI39G1260 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 2.6e-56 222.6 195 64.1
HanXRQChr03g0076461 Helianthus annuus HOM05D006936 ORTHO05D008273 3.4e-56 222.2 196 61.7
DCAR_022566 Daucus carota HOM05D006936 ORTHO05D008273 4.4e-56 221.9 195 59.5
MD11G1216700 Malus domestica HOM05D006936 ORTHO05D008273 4.4e-56 221.9 195 60.5
Glyma.08G317000 Glycine max HOM05D006936 ORTHO05D008273 7.5e-56 221.1 195 61.0
Lalb_Chr20g0113821 Lupinus albus HOM05D006936 ORTHO05D008273 7.5e-56 221.1 196 60.2
TWI38G2356 Tripterygium wilfordii HOM05D006936 ORTHO05D008273 7.5e-56 221.1 195 62.6
BcaC07g38260 Brassica carinata HOM05D006936 ORTHO05D008273 9.8e-56 220.7 193 59.6
Lj6g0001928 Lotus japonicus HOM05D006936 ORTHO05D008273 9.8e-56 220.7 195 63.1
ClCG10G005400 Citrullus lanatus HOM05D006936 ORTHO05D008273 1.3e-55 220.3 195 61.0
VMungo0540G1312 Vigna mungo HOM05D006936 ORTHO05D008273 1.7e-55 219.9 195 60.0
Sopen07g032840 Solanum pennellii HOM05D006936 ORTHO05D008273 6.4e-55 218.0 195 62.1
AT4G26965 Arabidopsis thaliana HOM05D006936 ORTHO05D008273 1.1e-54 217.2 193 62.2
Sp7g24910 Schrenkiella parvula HOM05D006936 ORTHO05D008273 1.1e-54 217.2 193 59.1
PGSC0003DMG401022215 Solanum tuberosum HOM05D006936 ORTHO05D008273 1.9e-54 216.5 195 61.5
Migut.H01824 Erythranthe guttata HOM05D006936 ORTHO05D008273 2.4e-54 216.1 195 59.0
THA.LOC104813424 Tarenaya hassleriana HOM05D006936 ORTHO05D008273 2.4e-54 216.1 195 57.9
TPR.G33779 Trifolium pratense HOM05D006936 ORTHO05D008273 4.1e-54 215.3 196 58.2
MSTRG.12976 Avicennia marina HOM05D006936 ORTHO05D008273 7.0e-54 214.5 197 60.4
Medtr3g052260 Medicago truncatula HOM05D006936 ORTHO05D008273 7.0e-54 214.5 196 56.6
Solyc07g064640.3 Solanum lycopersicum HOM05D006936 ORTHO05D008273 9.2e-54 214.2 195 60.5
Cc05_g13850 Coffea canephora HOM05D006936 ORTHO05D008273 1.2e-53 213.8 196 58.7
Ca_19852_v3 Cicer arietinum L. HOM05D006936 ORTHO05D008273 1.6e-53 213.4 196 60.2
BcaB03g12517 Brassica carinata HOM05D006936 ORTHO05D008273 2.0e-53 213.0 193 58.5
C08p10070 Brassica napus HOM05D006936 ORTHO05D008273 2.7e-53 212.6 193 59.1
BolC8t48685H Brassica oleracea HOM05D006936 ORTHO05D008273 2.7e-53 212.6 193 59.1
PGR031G2182 Punica granatum HOM05D006936 ORTHO05D008273 7.8e-53 211.1 195 59.0
Potri.001G109600 Populus trichocarpa HOM05D006936 ORTHO05D008273 1.0e-52 210.7 196 58.7
C01p23100 Brassica napus HOM05D006936 ORTHO05D008273 1.7e-52 209.9 196 58.7
Lsat_1_v5_gn_9_93840 Lactuca sativa HOM05D006936 ORTHO05D008273 5.0e-52 208.4 197 59.9
Psat5g178440 Pisum sativum HOM05D006936 ORTHO05D008273 6.6e-52 208.0 197 55.8
QL08p009960 Quercus lobata HOM05D006936 ORTHO05D008273 6.6e-52 208.0 230 52.2
EL10Ac4g07798 Beta vulgaris HOM05D006936 ORTHO05D008273 8.6e-52 207.6 193 57.5
A01p18140 Brassica napus HOM05D006936 ORTHO05D008273 8.6e-52 207.6 196 56.6
Nn1g03514 Nelumbo nucifera HOM05D006936 ORTHO05D008273 2.5e-51 206.1 195 59.5
BraA01t01769Z Brassica rapa HOM05D006936 ORTHO05D008273 3.3e-51 205.7 204 54.9
HPP92_004131 Vanilla planifolia HOM05D006936 ORTHO05D008273 3.3e-51 205.7 195 56.4
BolC1t02244H Brassica oleracea HOM05D006936 ORTHO05D008273 5.6e-51 204.9 207 55.6
ECA240G2843 Erigeron canadensis HOM05D006936 ORTHO05D008273 5.6e-51 204.9 182 59.9
Sc16g0005990 Simmondsia chinensis HOM05D006936 ORTHO05D008273 9.5e-51 204.1 193 58.5
BraA08t34018Z Brassica rapa HOM05D006936 ORTHO05D008273 6.2e-50 201.4 225 52.9
FAN16G3045 Fragaria x ananassa HOM05D006936 ORTHO05D008273 1.8e-49 199.9 216 54.2
Os09g0500200 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 5.2e-49 198.4 197 57.9
arahy.Tifrunner.gnm1.ann1.HAV09U Arachis hypogaea HOM05D006936 ORTHO05D008273 2.6e-48 196.1 146 66.4
Rhsim06G0217500 Rhododendron simsii HOM05D000228 ORTHO05D001122 3.4e-48 195.7 174 59.8
Nitab4.5_0003495g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 5.8e-48 194.9 133 72.9
Thhalv10026517m.g Eutrema salsugineum HOM05D006936 ORTHO05D008273 9.9e-48 194.1 133 70.7
Nitab4.5_0007360g0030 Nicotiana tabacum HOM05D006936 ORTHO05D008273 9.9e-48 194.1 133 72.9
arahy.Tifrunner.gnm1.ann1.MX8M57 Arachis hypogaea HOM05D006936 ORTHO05D008273 1.7e-47 193.4 164 60.4
Cfa020336 Carpinus fangiana HOM05D000228 ORTHO05D001122 1.7e-47 193.4 133 68.4
unitig_8.g4785 Utricularia gibba HOM05D006936 ORTHO05D008273 6.4e-47 191.4 194 54.6
CDE05G0574 Ceratophyllum demersum HOM05D006936 ORTHO05D008273 1.1e-46 190.7 133 72.9
Oeu048401.1 Olea europaea HOM05D006936 ORTHO05D008273 1.1e-46 190.7 130 73.1
Sed0005355 Sechium edule HOM05D006936 ORTHO05D008273 4.1e-46 188.7 129 70.5
Sabra01G0082900 Salix brachista HOM05D006936 ORTHO05D008273 2.1e-45 186.4 147 63.9
CAN.G337.138 Capsicum annuum HOM05D006936 ORTHO05D008273 4.6e-45 185.3 195 53.8
Hma1.2p1_0738F.1_g211130 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 7.8e-45 184.5 156 64.7
MBI02_g21871_MAGBIO Magnolia biondii HOM05D006936 ORTHO05D008273 1.3e-44 183.7 221 50.7
Peaxi162Scf00235g00220 Petunia axillaris HOM05D006936 ORTHO05D008273 3.0e-44 182.6 224 50.9
Zm00001eb102230 Zea mays HOM05D006936 ORTHO05D008273 1.5e-43 180.3 199 53.3
A08p20640 Brassica napus HOM05D006936 ORTHO05D008273 2.5e-43 179.5 189 56.1
ATR1094G005 Amborella trichopoda HOM05D006936 ORTHO05D008273 1.6e-42 176.8 152 60.5
CANSAT11G0469 Cannabis sativa HOM05D006936 ORTHO05D008273 3.4e-40 169.1 199 51.3
Atru.chr2.3444 Acer truncatum HOM05D006936 ORTHO05D008273 1.3e-39 167.2 98 79.6
Dinv40761 Davidia involucrata HOM05D006936 ORTHO05D008273 3.8e-39 165.6 139 68.3
CARHR234570 Cardamine hirsuta HOM05D006936 ORTHO05D008273 8.4e-39 164.5 159 56.6
Aa31LG5G12010 Aethionema arabicum HOM05D006936 ORTHO05D008273 1.6e-37 160.2 193 51.3
MELO3C025377.2 Cucumis melo HOM05D006936 ORTHO05D008273 3.3e-35 152.5 216 45.8
vmacro02233 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 5.6e-35 151.8 91 78.0
Sabra18G0079500 Salix brachista HOM05D006936 ORTHO05D008273 5.2e-33 145.2 118 61.0
Hund23239 Selenicereus undatus HOM05D006936 ORTHO05D008273 1.9e-30 136.7 169 47.3
Actinidia24797 Actinidia chinensis HOM05D006936 ORTHO05D008273 4.2e-30 135.6 127 59.8
Hma1.2p1_0738F.1_g211110 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 1.0e-28 131.0 74 78.4
Os05g0538900 Oryza sativa ssp. japonica HOM05D006936 ORTHO05D008273 6.6e-28 128.3 83 74.7
Hma1.2p1_0738F.1_g211140 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.8e-26 122.9 129 58.9
Hma1.2p1_2518F.1_g323762 Hydrangea macrophylla HOM05D006936 ORTHO05D008273 2.8e-26 122.9 129 58.9
AUR62020430 Chenopodium quinoa HOM05D006936 ORTHO05D008273 1.8e-25 120.2 208 39.9
Mapoly0093s0007 Marchantia polymorpha HOM05D006936 ORTHO05D008273 3.8e-23 112.5 209 36.4
Pp3c15_25830 Physcomitrium patens HOM05D006936 ORTHO05D008273 3.5e-21 105.9 98 54.1
arahy.Tifrunner.gnm1.ann1.XX62UZ Arachis hypogaea HOM05D006936 ORTHO05D008273 2.4e-17 93.2 121 49.6
Ah.06g185850 Amaranthus hybridus HOM05D006936 ORTHO05D008273 9.3e-14 81.3 119 48.7
SEGI_32271 Sequoiadendron giganteum HOM05D006301 ORTHO05D008273 7.6e-08 61.6 45 60.0
AUR62015785 Chenopodium quinoa HOM05D000355 ORTHO05D000227 7.1e-06 55.1 97 38.1
DCAR_000990 Daucus carota HOM05D006936 ORTHO05D008273 7.1e-06 55.1 61 54.1
vmacro02234 Vaccinium macrocarpon HOM05D006936 ORTHO05D008273 7.1e-06 55.1 84 50.0


User provided reference genes

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