Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01788 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 6.9e-70 267.3 146 100.0
Aqoxy5G00387 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 7.1e-59 230.7 146 80.8
Aqoxy3G02494 Aquilegia oxysepala HOM05D004802 ORTHO05D005591 1.8e-57 226.1 147 79.6
HanXRQChr05g0155531 Helianthus annuus HOM05D004802 ORTHO05D005591 1.1e-54 216.9 146 76.0
SGA_v2.0_scaffold114G31844 Striga asiatica HOM05D004802 ORTHO05D005591 4.0e-54 214.9 146 80.1
Lsat_1_v5_gn_5_17000 Lactuca sativa HOM05D004802 ORTHO05D005591 5.3e-54 214.5 146 75.3
MBI19_g12136_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 5.3e-54 214.5 146 74.7
Migut.D01783 Erythranthe guttata HOM05D004802 ORTHO05D005591 1.2e-53 213.4 146 75.3
Eucgr.B00348 Eucalyptus grandis HOM05D004802 ORTHO05D005591 2.0e-53 212.6 146 73.3
MSTRG.23103 Avicennia marina HOM05D004802 ORTHO05D005591 2.6e-53 212.2 146 74.0
CSS0033619 Camellia sinensis var. sinensis HOM05D004802 ORTHO05D005591 3.4e-53 211.8 146 78.8
MD14G1184900 Malus domestica HOM05D004802 ORTHO05D005591 3.4e-53 211.8 142 76.1
CsaV3_1G001710 Cucumis sativus L. HOM05D004802 ORTHO05D005591 5.8e-53 211.1 146 73.3
CDE01G0824 Ceratophyllum demersum HOM05D004802 ORTHO05D005591 9.9e-53 210.3 146 74.0
ECA232G0284 Erigeron canadensis HOM05D004802 ORTHO05D005591 9.9e-53 210.3 146 74.7
Prupe.5G177600 Prunus persica HOM05D004802 ORTHO05D005591 1.3e-52 209.9 146 74.7
TAR362G1012 Trochodendron aralioides HOM05D004802 ORTHO05D005591 1.7e-52 209.5 146 73.3
Potri.014G111100 Populus trichocarpa HOM05D004802 ORTHO05D005591 3.8e-52 208.4 146 74.0
Sed0010100 Sechium edule HOM05D004802 ORTHO05D005591 3.8e-52 208.4 146 71.2
DCAR_016496 Daucus carota HOM05D004802 ORTHO05D005591 4.9e-52 208.0 146 71.2
DCAR_021562 Daucus carota HOM05D004802 ORTHO05D005591 6.4e-52 207.6 146 71.2
Cfa019082 Carpinus fangiana HOM05D004802 ORTHO05D005591 8.4e-52 207.2 146 72.6
MBI18_g21823_MAGBIO Magnolia biondii HOM05D004802 ORTHO05D005591 1.1e-51 206.8 146 79.5
Cpa.g.sc110.33 Carica papaya HOM05D004802 ORTHO05D005591 1.4e-51 206.5 146 71.9
RcHm_v2.0_Chr7g0179521 Rosa chinensis HOM05D004802 ORTHO05D005591 1.9e-51 206.1 146 72.6
vmacro16596 Vaccinium macrocarpon HOM05D004802 ORTHO05D005591 2.4e-51 205.7 146 76.0
CANSAT80G2080 Cannabis sativa HOM05D004802 ORTHO05D005591 4.2e-51 204.9 146 78.1
Hma1.2p1_0483F.1_g162710 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 5.5e-51 204.5 146 71.9
PGR083G1798 Punica granatum HOM05D004802 ORTHO05D005591 5.5e-51 204.5 146 73.3
GSVIVG01007807001 Vitis vinifera HOM05D004802 ORTHO05D005591 9.3e-51 203.8 146 71.2
Aa31LG3G15940 Aethionema arabicum HOM05D004802 ORTHO05D005591 2.1e-50 202.6 146 75.3
ATR0796G060 Amborella trichopoda HOM05D004802 ORTHO05D005591 2.1e-50 202.6 146 70.5
Glyma.04G171700 Glycine max HOM05D004802 ORTHO05D005591 2.1e-50 202.6 146 71.2
HanXRQChr05g0163301 Helianthus annuus HOM05D004802 ORTHO05D005591 2.1e-50 202.6 149 75.2
HanXRQChr05g0163571 Helianthus annuus HOM05D004802 ORTHO05D005591 2.1e-50 202.6 149 75.2
Rhsim12G0162600 Rhododendron simsii HOM05D004802 ORTHO05D005591 2.7e-50 202.2 146 75.3
Sc16g0001640 Simmondsia chinensis HOM05D004802 ORTHO05D005591 2.7e-50 202.2 146 77.4
Carub.0005s0629 Capsella rubella HOM05D004802 ORTHO05D005591 3.5e-50 201.8 146 72.6
Cc00_g03600 Coffea canephora HOM05D004802 ORTHO05D005591 3.5e-50 201.8 147 76.2
PSO170G0191 Papaver somniferum HOM05D004802 ORTHO05D005591 3.5e-50 201.8 148 70.9
Glyma.06G192200 Glycine max HOM05D004802 ORTHO05D005591 4.6e-50 201.4 146 70.5
LjContig00081g0027263 Lotus japonicus HOM05D004802 ORTHO05D005591 4.6e-50 201.4 146 71.2
BolC5t29353H Brassica oleracea HOM05D000129 ORTHO05D005591 6.0e-50 201.1 146 69.9
Lalb_Chr23g0265291 Lupinus albus HOM05D004802 ORTHO05D005591 6.0e-50 201.1 150 68.7
BcaB02g06722 Brassica carinata HOM05D004802 ORTHO05D005591 7.9e-50 200.7 147 72.8
BcaC07g42500 Brassica carinata HOM05D004802 ORTHO05D005591 7.9e-50 200.7 147 73.5
Sp1g06517 Schrenkiella parvula HOM05D004802 ORTHO05D005591 7.9e-50 200.7 146 69.2
MD06G1178500 Malus domestica HOM05D004802 ORTHO05D005591 1.0e-49 200.3 111 88.3
Actinidia34948 Actinidia chinensis HOM05D004802 ORTHO05D005591 1.3e-49 199.9 134 76.9
PSO782G1633 Papaver somniferum HOM05D004802 ORTHO05D005591 1.3e-49 199.9 148 70.3
Psat2g170440 Pisum sativum HOM05D004802 ORTHO05D005591 1.3e-49 199.9 146 71.2
BcaC07g41973 Brassica carinata HOM05D004802 ORTHO05D005591 1.8e-49 199.5 148 67.6
C08p50320 Brassica napus HOM05D004802 ORTHO05D005591 1.8e-49 199.5 148 67.6
BolC8t52561H Brassica oleracea HOM05D004802 ORTHO05D005591 1.8e-49 199.5 148 67.6
BraA06t23701Z Brassica rapa HOM05D004802 ORTHO05D005591 1.8e-49 199.5 146 69.2
AL1G18110 Arabidopsis lyrata HOM05D004802 ORTHO05D005591 3.0e-49 198.7 146 67.8
Ca_06425_v3 Cicer arietinum L. HOM05D000308 ORTHO05D000194 3.0e-49 198.7 111 87.4
Manes.12G158200 Manihot esculenta HOM05D004802 ORTHO05D005591 3.0e-49 198.7 146 70.5
QL03p066954 Quercus lobata HOM05D004802 ORTHO05D005591 5.1e-49 198.0 145 69.0
unitig_27.g24928 Utricularia gibba HOM05D004802 ORTHO05D005591 5.1e-49 198.0 146 71.2
A09p66160 Brassica napus HOM05D004802 ORTHO05D005591 6.7e-49 197.6 146 68.5
BraA09t41954Z Brassica rapa HOM05D004802 ORTHO05D005591 6.7e-49 197.6 146 68.5
THA.LOC104818227 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 6.7e-49 197.6 146 67.8
TPR.G6374 Trifolium pratense HOM05D004802 ORTHO05D005591 6.7e-49 197.6 146 69.9
VMungo1309G2385 Vigna mungo HOM05D004802 ORTHO05D005591 8.7e-49 197.2 146 69.9
Potri.002G185800 Populus trichocarpa HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 74.0
THA.LOC104821462 Tarenaya hassleriana HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 70.5
TPR.G20968 Trifolium pratense HOM05D004802 ORTHO05D005591 1.5e-48 196.4 146 69.2
arahy.Tifrunner.gnm1.ann1.J5PS4T Arachis hypogaea HOM05D004802 ORTHO05D005591 1.9e-48 196.1 146 67.8
Thhalv10009035m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.9e-48 196.1 146 74.0
AT1G07830 Arabidopsis thaliana HOM05D004802 ORTHO05D005591 2.5e-48 195.7 146 70.5
arahy.Tifrunner.gnm1.ann1.H02ACK Arachis hypogaea HOM05D004802 ORTHO05D005591 2.5e-48 195.7 146 67.8
Sc12g0005500 Simmondsia chinensis HOM05D004802 ORTHO05D005591 3.3e-48 195.3 146 67.1
C05p05910 Brassica napus HOM05D005594 ORTHO05D006403 5.6e-48 194.5 141 70.2
Nitab4.5_0000499g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 5.6e-48 194.5 146 69.9
Phvul.009G188900 Phaseolus vulgaris HOM05D004802 ORTHO05D005591 5.6e-48 194.5 146 68.5
TWI32G0003 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 7.4e-48 194.1 146 71.9
Actinidia19087 Actinidia chinensis HOM05D004802 ORTHO05D005591 9.6e-48 193.7 134 73.1
CARHR007640 Cardamine hirsuta HOM05D004802 ORTHO05D005591 9.6e-48 193.7 146 67.1
COL.COLO4_24762 Corchorus olitorius HOM05D004802 ORTHO05D005591 1.3e-47 193.4 147 76.9
Medtr5g015850 Medicago truncatula HOM05D004802 ORTHO05D005591 1.3e-47 193.4 146 69.9
Solyc03g114050.3 Solanum lycopersicum HOM05D004802 ORTHO05D005591 1.3e-47 193.4 146 69.9
Sopen03g033100 Solanum pennellii HOM05D004802 ORTHO05D005591 1.3e-47 193.4 146 69.9
HPP92_014441 Vanilla planifolia HOM05D004802 ORTHO05D005591 1.3e-47 193.4 110 84.5
Thhalv10014955m.g Eutrema salsugineum HOM05D004802 ORTHO05D005591 1.6e-47 193.0 146 71.9
PGSC0003DMG400024483 Solanum tuberosum HOM05D004802 ORTHO05D005591 1.6e-47 193.0 146 74.7
Ciclev10022742m.g Citrus clementina HOM05D004802 ORTHO05D005591 2.1e-47 192.6 146 75.3
Duzib068G0850 Durio zibethinus HOM05D004802 ORTHO05D005591 2.1e-47 192.6 110 86.4
Atru.chr9.2421 Acer truncatum HOM05D004802 ORTHO05D005591 2.8e-47 192.2 152 69.7
Peaxi162Scf00017g02344 Petunia axillaris HOM05D004802 ORTHO05D005591 2.8e-47 192.2 110 85.5
Dinv41117 Davidia involucrata HOM05D001600 ORTHO05D001502 3.7e-47 191.8 133 73.7
Oeu026523.1 Olea europaea HOM05D004802 ORTHO05D005591 3.7e-47 191.8 146 69.2
SalBow2G1273 Salvia bowleyana HOM05D004802 ORTHO05D005591 6.2e-47 191.0 146 67.8
TWI75G1644 Tripterygium wilfordii HOM05D004802 ORTHO05D005591 8.2e-47 190.7 146 71.2
Ah.08g213760 Amaranthus hybridus HOM05D004802 ORTHO05D005591 1.1e-46 190.3 112 82.1
FvH4_5g16620 Fragaria vesca HOM05D004802 ORTHO05D005591 1.1e-46 190.3 146 68.5
Nitab4.5_0001422g0100 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.1e-46 190.3 110 84.5
EL10Ac7g17734 Beta vulgaris HOM05D004802 ORTHO05D005591 1.4e-46 189.9 146 67.8
AUR62025410 Chenopodium quinoa HOM05D004802 ORTHO05D005591 1.4e-46 189.9 146 67.1
Peaxi162Scf00689g00332 Petunia axillaris HOM05D004802 ORTHO05D005591 1.4e-46 189.9 146 69.9
ECA246G1319 Erigeron canadensis HOM05D004802 ORTHO05D005591 1.8e-46 189.5 167 62.3
Gohir.A12G276300 Gossypium hirsutum HOM05D004802 ORTHO05D005591 1.8e-46 189.5 110 85.5
Gorai.008G297400 Gossypium raimondii HOM05D004802 ORTHO05D005591 1.8e-46 189.5 110 85.5
Cpa.g.sc170.28 Carica papaya HOM05D004802 ORTHO05D005591 2.4e-46 189.1 135 69.6
AUR62008830 Chenopodium quinoa HOM05D004802 ORTHO05D005591 2.4e-46 189.1 112 81.2
Hund18328 Selenicereus undatus HOM05D004802 ORTHO05D005591 2.4e-46 189.1 142 67.6
FAN18G4009 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.1e-46 188.7 146 67.8
Thecc.03G006700 Theobroma cacao HOM05D004802 ORTHO05D005591 3.1e-46 188.7 147 73.5
FAN08G2523 Fragaria x ananassa HOM05D004802 ORTHO05D005591 6.9e-46 187.6 144 68.1
Gohir.D12G276900 Gossypium hirsutum HOM05D004802 ORTHO05D005591 6.9e-46 187.6 110 84.5
Manes.15G185900 Manihot esculenta HOM05D004802 ORTHO05D005591 6.9e-46 187.6 146 68.5
FAN13G0264 Fragaria x ananassa HOM05D004802 ORTHO05D005591 9.0e-46 187.2 146 67.1
Zm00001eb378540 Zea mays HOM05D004802 ORTHO05D005591 1.5e-45 186.4 145 66.2
Hma1.2p1_2640F.1_g325880 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 2.2e-44 182.6 101 88.1
arahy.Tifrunner.gnm1.ann1.RYE93B Arachis hypogaea HOM05D004802 ORTHO05D005591 2.9e-44 182.2 170 58.2
Os06g0128500 Oryza sativa ssp. japonica HOM05D004802 ORTHO05D005591 2.9e-44 182.2 111 82.0
SEGI_23384 Sequoiadendron giganteum HOM05D004802 ORTHO05D005591 4.9e-44 181.4 146 63.7
Dinv25814 Davidia involucrata HOM05D004802 ORTHO05D005591 1.4e-43 179.9 107 80.4
MELO3C017111.2 Cucumis melo HOM05D004802 ORTHO05D005591 2.7e-42 175.6 222 48.2
FAN04G1836 Fragaria x ananassa HOM05D004802 ORTHO05D005591 3.5e-42 175.3 111 78.4
ClCG06G016810 Citrullus lanatus HOM05D004802 ORTHO05D005591 4.3e-40 168.3 92 89.1
Nitab4.5_0008768g0020 Nicotiana tabacum HOM05D004802 ORTHO05D005591 4.3e-40 168.3 176 54.5
QL10p013461 Quercus lobata HOM05D004802 ORTHO05D005591 4.3e-40 168.3 95 87.4
RcHm_v2.0_Chr3g0484411 Rosa chinensis HOM05D004802 ORTHO05D005591 1.6e-39 166.4 90 90.0
QL03p067058 Quercus lobata HOM05D004802 ORTHO05D005591 6.3e-39 164.5 88 89.8
Rhsim08G0169000 Rhododendron simsii HOM05D004802 ORTHO05D005591 1.4e-38 163.3 177 52.0
Haze_07452 Corylus avellana HOM05D004802 ORTHO05D005591 6.1e-34 147.9 112 65.2
CiPaw.11G030400 Carya illinoinensis HOM05D004802 ORTHO05D005591 1.0e-33 147.1 110 67.3
Cc00_g07690 Coffea canephora HOM05D004802 ORTHO05D005591 9.7e-32 140.6 111 66.7
Nn2g12605 Nelumbo nucifera HOM05D004802 ORTHO05D005591 5.3e-30 134.8 100 74.0
Pp3c17_20320 Physcomitrium patens HOM05D004802 ORTHO05D005591 9.1e-30 134.0 108 60.2
Cc00_g30360 Coffea canephora HOM05D004802 ORTHO05D005591 3.8e-28 128.6 112 67.9
Mapoly0009s0030 Marchantia polymorpha HOM05D004802 ORTHO05D005591 3.8e-28 128.6 108 60.2
CBR_g30055 Chara braunii HOM05D004802 ORTHO05D005591 1.1e-24 117.1 109 57.8
Nitab4.5_0000003g0430 Nicotiana tabacum HOM05D004802 ORTHO05D005591 1.1e-24 117.1 117 57.3
RcHm_v2.0_Chr3g0484341 Rosa chinensis HOM05D004802 ORTHO05D005591 2.0e-24 116.3 63 92.1
Hma1.2p1_0107F.1_g051480 Hydrangea macrophylla HOM05D004802 ORTHO05D005591 1.1e-22 110.5 60 91.7
AagrBONN_evm.TU.Sc2ySwM_368.3252 Anthoceros agrestis HOM05D004802 ORTHO05D005591 1.4e-19 100.1 73 64.4
SHI01132 Sapria himalayana HOM05D004802 ORTHO05D005591 1.4e-19 100.1 89 60.7
SMO228G0088 Selaginella moellendorffii HOM05D004802 ORTHO05D005591 1.9e-19 99.8 86 55.8
MCO15G004 Micromonas commoda HOM05D004802 ORTHO05D005591 1.4e-14 83.6 110 42.7
A06p04970 Brassica napus HOM05D004802 ORTHO05D005591 3.1e-14 82.4 113 45.1
Pp3c14_16960 Physcomitrium patens HOM05D004802 ORTHO05D005591 6.5e-12 74.7 63 58.7
Haze_26898 Corylus avellana HOM05D004802 ORTHO05D005591 1.5e-11 73.6 87 42.5
A09p37440 Brassica napus HOM05D004802 ORTHO05D005591 1.0e-09 67.4 48 68.8
Haze_07453 Corylus avellana HOM05D004802 ORTHO05D005591 3.0e-09 65.9 35 88.6
PRCOL_00002926 Prasinoderma coloniale HOM05D004802 ORTHO05D005591 1.1e-06 57.4 111 36.9
BcaC02g11004 Brassica carinata HOM05D004802 ORTHO05D005591 3.1e-06 55.8 43 65.1
C04p22280 Brassica napus HOM05D004802 ORTHO05D020149 3.1e-06 55.8 43 65.1
Cfa024847 Carpinus fangiana HOM05D004802 ORTHO05D005591 3.1e-06 55.8 72 43.1
BolC3t13075H Brassica oleracea HOM05D004802 ORTHO05D005591 9.1e-06 54.3 29 82.8


User provided reference genes

Program Settings