Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01769 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 2.9e-216 755.0 389 100.0
Aqoxy2G02170 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 1.5e-76 290.8 321 50.8
Aqoxy6G01995 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 4.5e-52 209.5 268 46.3
Aqoxy4G02089 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 6.3e-46 189.1 149 67.8
Aqoxy190s002 Aquilegia oxysepala HOM05D013338 ORTHO05D014821 8.0e-41 172.2 151 62.3
PSO017G0648 Papaver somniferum HOM05D013338 ORTHO05D014821 1.8e-32 144.4 339 30.1
PSO764G0360 Papaver somniferum HOM05D013338 ORTHO05D014821 4.4e-31 139.8 266 32.3
PSO765G0105 Papaver somniferum HOM05D013338 ORTHO05D014821 4.4e-31 139.8 304 31.2
Aqoxy2G01646 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.9e-26 124.4 70 82.9
PSO357G0059 Papaver somniferum HOM05D013338 ORTHO05D014821 1.9e-26 124.4 268 30.2
Aqoxy4G02090 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 5.6e-26 122.9 70 82.9
PSO079G0016 Papaver somniferum HOM05D013338 ORTHO05D014821 1.8e-24 117.9 274 32.1
TAR344G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-24 115.9 191 35.1
TAR365G0630 Trochodendron aralioides HOM05D001309 ORTHO05D000385 3.4e-23 113.6 191 34.0
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 3.2e-21 107.1 318 27.4
Dinv09828 Davidia involucrata HOM05D001309 ORTHO05D000385 9.2e-21 105.5 257 28.8
HanXRQChr03g0064971 Helianthus annuus HOM05D001309 ORTHO05D005970 9.2e-21 105.5 298 29.5
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.8e-20 102.4 275 26.9
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 7.8e-20 102.4 268 26.9
MBI11_g30647_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.3e-19 101.7 310 26.1
Actinidia00177 Actinidia chinensis HOM05D001309 ORTHO05D000385 3.9e-19 100.1 232 28.4
Lsat_1_v5_gn_9_120520 Lactuca sativa HOM05D001309 ORTHO05D005970 3.9e-19 100.1 233 31.8
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.6e-19 99.4 275 26.5
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-18 97.4 275 26.2
Oeu023404.2 Olea europaea HOM05D001309 ORTHO05D005970 2.5e-18 97.4 230 29.6
Actinidia01605 Actinidia chinensis HOM05D001309 ORTHO05D005970 4.3e-18 96.7 189 29.6
Actinidia39002 Actinidia chinensis HOM05D001309 ORTHO05D000385 7.3e-18 95.9 228 29.4
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.8e-17 94.0 231 27.7
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 3.6e-17 93.6 224 27.2
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-16 92.0 303 25.1
CSS0040510 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.2e-16 89.7 187 30.5
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 5.2e-16 89.7 339 25.1
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.8e-16 89.4 275 24.7
Nn4g24072 Nelumbo nucifera HOM05D001309 ORTHO05D000385 1.2e-15 88.6 194 32.0
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.0e-15 87.8 232 27.2
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.8e-15 86.3 263 25.5
Aqoxy3G01549 Aquilegia oxysepala HOM05D000107 ORTHO05D000062 1.3e-14 85.1 40 100.0
Lj3g0027022 Lotus japonicus HOM05D004615 ORTHO05D000385 2.2e-14 84.3 204 32.4
EL10Ac3g06519 Beta vulgaris HOM05D008455 ORTHO05D009597 2.9e-14 84.0 308 25.3
HanXRQChr03g0064951 Helianthus annuus HOM05D005763 ORTHO05D005970 6.4e-14 82.8 230 30.0
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 2.4e-13 80.9 214 28.0
TAR622G0651 Trochodendron aralioides HOM05D000141 ORTHO05D000385 1.2e-12 78.6 243 25.5
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 1.6e-12 78.2 329 24.6
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.6e-12 78.2 184 27.7
AUR62037081 Chenopodium quinoa HOM05D008455 ORTHO05D009597 2.1e-12 77.8 232 26.7
MBI06_g41780_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.1e-12 77.8 190 28.9
TAR365G0123 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-12 77.8 243 25.5
TAR369G0367 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.1e-12 77.8 243 25.5
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-12 77.0 275 23.6
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.0e-12 76.3 186 26.3
TAR375G0312 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.0e-12 76.3 143 31.5
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 7.8e-12 75.9 168 29.2
TAR629G2892 Trochodendron aralioides HOM05D001309 ORTHO05D000385 7.8e-12 75.9 179 28.5
AUR62039309 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.0e-11 75.5 234 24.8
Dinv19412 Davidia involucrata HOM05D001309 ORTHO05D005970 1.3e-11 75.1 225 27.6
EL10Ac6g14371 Beta vulgaris HOM05D008455 ORTHO05D009597 1.7e-11 74.7 199 27.1
AUR62039826 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.7e-11 74.7 216 25.5
Atru.chr6.1842 Acer truncatum HOM05D005012 ORTHO05D005886 2.3e-11 74.3 177 30.5
HanXRQChr03g0084621 Helianthus annuus HOM05D008488 ORTHO05D000385 2.3e-11 74.3 233 20.6
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.0e-11 73.9 202 26.7
EL10Ac2g03454 Beta vulgaris HOM05D008455 ORTHO05D009597 5.1e-11 73.2 229 25.8
A09p31580 Brassica napus HOM05D008309 ORTHO05D010308 6.6e-11 72.8 169 27.8
Peaxi162Scf00050g00139 Petunia axillaris HOM05D001309 ORTHO05D000385 1.5e-10 71.6 181 29.8
EL10Ac2g03097 Beta vulgaris HOM05D008455 ORTHO05D009597 1.9e-10 71.2 307 23.1
EL10Ac9g22691 Beta vulgaris HOM05D008455 ORTHO05D009597 1.9e-10 71.2 307 23.5
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.9e-10 71.2 203 24.6
EL10Ac2g03816 Beta vulgaris HOM05D008455 ORTHO05D009597 2.5e-10 70.9 331 22.4
Os04g0610000 Oryza sativa ssp. japonica HOM05D001309 ORTHO05D000385 2.5e-10 70.9 303 22.1
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 2.5e-10 70.9 205 26.8
TAR369G0393 Trochodendron aralioides HOM05D008595 ORTHO05D000385 2.5e-10 70.9 107 32.7
EL10Ac4g08902 Beta vulgaris HOM05D008455 ORTHO05D009597 3.3e-10 70.5 307 23.1
Lj2g0010843 Lotus japonicus HOM05D004615 ORTHO05D000385 3.3e-10 70.5 175 29.7
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 3.3e-10 70.5 350 22.3
A09p47040 Brassica napus HOM05D008309 ORTHO05D010308 4.3e-10 70.1 220 26.4
BraA09t40169Z Brassica rapa HOM05D008309 ORTHO05D010308 4.3e-10 70.1 220 26.4
BraA10t44443Z Brassica rapa HOM05D008309 ORTHO05D010308 4.3e-10 70.1 224 25.4
AUR62034408 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.3e-10 70.1 213 26.3
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 4.3e-10 70.1 218 26.6
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 4.3e-10 70.1 218 26.6
Nitab4.5_0000188g0020 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.6e-10 69.7 364 22.3
Nn7g37991 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.3e-10 69.3 166 32.5
TWI31G0781 Tripterygium wilfordii HOM05D001309 ORTHO05D000385 1.2e-09 68.6 217 24.4
AUR62037410 Chenopodium quinoa HOM05D008455 ORTHO05D009597 1.6e-09 68.2 216 25.9
Nn1g02510 Nelumbo nucifera HOM05D001309 ORTHO05D000385 2.1e-09 67.8 179 33.0
Nitab4.5_0000892g0160 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.1e-09 67.8 190 26.3
MBI18_g39412_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.8e-09 67.4 155 26.5
EL10Ac4g08049 Beta vulgaris HOM05D004615 ORTHO05D000385 4.7e-09 66.6 194 27.8
Nitab4.5_0000009g0080 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-09 66.6 214 29.0
Nitab4.5_0001556g0050 Nicotiana tabacum HOM05D001309 ORTHO05D000385 4.7e-09 66.6 183 27.9
EL10Ac5g11185 Beta vulgaris HOM05D004615 ORTHO05D000385 6.2e-09 66.2 194 27.8
EL10As16g24148 Beta vulgaris HOM05D004615 ORTHO05D000385 6.2e-09 66.2 194 27.8
BraA06t25453Z Brassica rapa HOM05D008309 ORTHO05D010308 6.2e-09 66.2 224 25.4
MBI17_g21607_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 6.2e-09 66.2 202 26.2
Prupe.2G006600 Prunus persica HOM05D005012 ORTHO05D000385 6.2e-09 66.2 199 23.6
TPR.G34719 Trifolium pratense HOM05D002954 ORTHO05D000385 8.1e-09 65.9 194 26.3
ECA247G3253 Erigeron canadensis HOM05D005763 ORTHO05D005970 1.1e-08 65.5 217 26.7
Prupe.1G266100 Prunus persica HOM05D005012 ORTHO05D000385 1.1e-08 65.5 195 24.1
MBI06_g39196_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-08 64.7 234 24.8
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 1.8e-08 64.7 215 25.6
ECA236G1232 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.3e-08 64.3 295 21.4
BolC4t26644H Brassica oleracea HOM05D008309 ORTHO05D010308 3.1e-08 63.9 220 25.5
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 3.1e-08 63.9 151 23.8
EL10Ac1g01684 Beta vulgaris HOM05D004615 ORTHO05D000385 4.0e-08 63.5 208 27.4
EL10Ac9g20807 Beta vulgaris HOM05D004615 ORTHO05D000385 4.0e-08 63.5 184 27.2
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 4.0e-08 63.5 233 26.6
PSO541G0763 Papaver somniferum HOM05D001309 ORTHO05D000385 4.0e-08 63.5 198 26.8
Nitab4.5_0001836g0050 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.2e-08 63.2 119 29.4
Nitab4.5_0004891g0030 Nicotiana tabacum HOM05D001309 ORTHO05D000385 5.2e-08 63.2 219 24.7
Nitab4.5_0028686g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 6.8e-08 62.8 159 27.7
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 6.8e-08 62.8 176 26.7
TAR623G0534 Trochodendron aralioides HOM05D001309 ORTHO05D000385 6.8e-08 62.8 123 35.0
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 8.9e-08 62.4 303 20.1
Nitab4.5_0006586g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 8.9e-08 62.4 203 25.1
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 8.9e-08 62.4 139 28.8
vmacro00652 Vaccinium macrocarpon HOM05D001309 ORTHO05D000385 8.9e-08 62.4 146 26.7
DCAR_032376 Daucus carota HOM05D013476 ORTHO05D012368 1.2e-07 62.0 159 27.7
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 1.2e-07 62.0 172 23.3
Psat1g098040 Pisum sativum HOM05D009811 ORTHO05D007166 1.2e-07 62.0 174 28.2
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.2e-07 62.0 284 21.5
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 1.5e-07 61.6 182 28.6
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 1.5e-07 61.6 193 30.1
EL10Ac5g11855 Beta vulgaris HOM05D004615 ORTHO05D000385 2.0e-07 61.2 191 27.2
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.0e-07 61.2 233 24.0
HanXRQChr09g0254541 Helianthus annuus HOM05D008488 ORTHO05D000385 2.0e-07 61.2 186 23.7
Atru.chr3.1415 Acer truncatum HOM05D005012 ORTHO05D005886 2.6e-07 60.8 190 26.8
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 2.6e-07 60.8 179 26.3
TWI36G1730 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.6e-07 60.8 163 27.0
QL93p0093_0054 Quercus lobata HOM05D003120 ORTHO05D003568 3.4e-07 60.5 231 26.8
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.4e-07 60.1 209 25.4
AUR62037441 Chenopodium quinoa HOM05D008455 ORTHO05D009597 4.4e-07 60.1 195 26.7
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 4.4e-07 60.1 152 23.7
DCAR_029772 Daucus carota HOM05D004615 ORTHO05D000385 5.8e-07 59.7 91 33.0
Nitab4.5_0002137g0170 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.8e-07 59.7 131 29.8
Nitab4.5_0008225g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.8e-07 59.7 168 27.4
Peaxi162Scf00878g00111 Petunia axillaris HOM05D003120 ORTHO05D003568 5.8e-07 59.7 188 25.5
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 5.8e-07 59.7 309 23.3
RcHm_v2.0_Chr7g0237841 Rosa chinensis HOM05D009706 ORTHO05D009452 5.8e-07 59.7 244 25.0
Sopen10g018180 Solanum pennellii HOM05D003120 ORTHO05D000001 5.8e-07 59.7 107 31.8
EL10Ac1g01751 Beta vulgaris HOM05D004615 ORTHO05D000385 7.6e-07 59.3 108 29.6
Nitab4.5_0011072g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 7.6e-07 59.3 112 27.7
PGR083G0420 Punica granatum HOM05D001309 ORTHO05D000385 7.6e-07 59.3 229 22.3
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 7.6e-07 59.3 278 22.3
EL10Ac5g11873 Beta vulgaris HOM05D004615 ORTHO05D000385 9.9e-07 58.9 200 26.5
EL10Ac6g13954 Beta vulgaris HOM05D008455 ORTHO05D009597 9.9e-07 58.9 192 24.5
Psat0s2928g0040 Pisum sativum HOM05D009811 ORTHO05D007166 1.3e-06 58.5 162 26.5
Prupe.7G105300 Prunus persica HOM05D005763 ORTHO05D005970 1.3e-06 58.5 181 23.2
C04p50470 Brassica napus HOM05D008309 ORTHO05D010308 1.7e-06 58.2 220 25.0
Nitab4.5_0000580g0310 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.7e-06 58.2 189 26.5
Zm00001eb269580 Zea mays HOM05D008576 ORTHO05D000385 1.7e-06 58.2 95 35.8
CiPaw.16G058400 Carya illinoinensis HOM05D001309 ORTHO05D000385 2.2e-06 57.8 200 28.0
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 2.2e-06 57.8 150 23.3
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.2e-06 57.8 215 26.0
EL10Ac9g22619 Beta vulgaris HOM05D004615 ORTHO05D000385 2.9e-06 57.4 171 28.7
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.9e-06 57.4 175 28.0
ECA164G0002 Erigeron canadensis HOM05D008488 ORTHO05D000385 2.9e-06 57.4 176 22.2
Manes.16G033751 Manihot esculenta HOM05D001309 ORTHO05D000385 2.9e-06 57.4 181 26.5
Peaxi162Scf00524g00083 Petunia axillaris HOM05D003120 ORTHO05D003568 2.9e-06 57.4 235 24.3
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 2.9e-06 57.4 154 22.7
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.7e-06 57.0 267 22.8
Haze_23034 Corylus avellana HOM05D003120 ORTHO05D003568 3.7e-06 57.0 208 26.0
Peaxi162Scf02251g00003 Petunia axillaris HOM05D003120 ORTHO05D003568 3.7e-06 57.0 148 26.4
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.7e-06 57.0 202 22.8
EL10Ac9g22640 Beta vulgaris HOM05D004615 ORTHO05D000385 4.9e-06 56.6 208 25.5
AUR62012549 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.9e-06 56.6 153 30.7
Nitab4.5_0003305g0030 Nicotiana tabacum HOM05D003120 ORTHO05D003568 4.9e-06 56.6 217 26.3
Peaxi162Scf00010g00918 Petunia axillaris HOM05D003120 ORTHO05D003568 4.9e-06 56.6 242 23.6
Peaxi162Scf00250g00511 Petunia axillaris HOM05D003120 ORTHO05D003568 4.9e-06 56.6 235 23.8
Peaxi162Scf01480g00009 Petunia axillaris HOM05D003120 ORTHO05D003568 6.4e-06 56.2 73 34.2
COL.COLO4_36623 Corchorus olitorius HOM05D001309 ORTHO05D000385 8.4e-06 55.8 186 24.7
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 8.4e-06 55.8 102 29.4
Nitab4.5_0002263g0070 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.4e-06 55.8 132 25.8
Peaxi162Scf00005g02812 Petunia axillaris HOM05D003120 ORTHO05D003568 8.4e-06 55.8 244 23.4
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 8.4e-06 55.8 139 23.0


User provided reference genes

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