Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01710 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 1.7e-85 319.3 160 100.0
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 8.1e-32 141.0 76 84.2
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-20 101.7 105 43.8
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-19 99.8 115 40.9
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-19 99.0 99 43.4
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-19 98.6 98 41.8
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-18 96.7 103 41.7
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-18 95.9 99 42.4
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-18 95.9 98 40.8
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-18 95.9 103 39.8
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-18 95.5 103 37.9
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-18 94.4 103 36.9
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-18 94.4 103 37.9
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 1.1e-17 94.0 100 43.0
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 1.5e-17 93.6 101 42.6
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-17 93.6 103 40.8
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-17 92.8 98 40.8
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-17 92.8 103 36.9
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-17 92.8 103 40.8
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 3.3e-17 92.4 108 42.6
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 3.3e-17 92.4 100 42.0
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-17 92.0 119 41.2
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-17 91.7 98 40.8
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-17 91.7 98 40.8
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-17 91.7 98 40.8
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-16 90.1 103 40.8
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-16 89.4 98 38.8
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-16 89.0 96 40.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-16 88.6 98 38.8
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-16 87.8 98 38.8
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-15 87.4 98 36.7
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-15 87.0 103 35.9
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-15 86.3 98 36.7
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-15 86.3 98 37.8
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-15 85.5 103 37.9
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-15 84.3 98 35.7
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 1.5e-14 83.6 97 40.2
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 2.0e-14 83.2 99 37.4
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-14 83.2 118 35.6
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-14 82.8 99 38.4
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-14 82.8 101 37.6
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-14 81.6 103 35.9
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-14 81.3 99 38.4
CSS0007507 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.3e-13 80.5 117 37.6
CSS0048717 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 1.3e-13 80.5 117 38.5
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-13 80.5 98 37.8
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.3e-13 80.5 100 46.0
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.7e-13 80.1 117 38.5
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 2.2e-13 79.7 100 46.0
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 79.3 89 39.3
CSS0001401 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D011435 3.8e-13 79.0 118 39.8
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-13 78.6 97 40.2
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-13 77.8 118 33.9
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.1e-12 77.4 103 40.8
EL10Ac9g21153 Beta vulgaris HOM05D000176 ORTHO05D000106 1.4e-12 77.0 98 38.8
EL10Ac3g06558 Beta vulgaris HOM05D000176 ORTHO05D000106 2.5e-12 76.3 98 38.8
EL10Ac4g08649 Beta vulgaris HOM05D000176 ORTHO05D000106 2.5e-12 76.3 98 38.8
EL10Ac4g08651 Beta vulgaris HOM05D000176 ORTHO05D000106 2.5e-12 76.3 98 38.8
CSS0009167 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 2.5e-12 76.3 118 38.1
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.5e-12 76.3 105 42.9
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.2e-12 75.5 103 39.8
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-12 75.5 117 32.5
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 92 37.0
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 5.5e-12 75.1 96 39.6
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-12 74.7 97 36.1
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.3e-12 74.3 92 35.9
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-11 72.4 102 33.3
Aqoxy2G01940 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.3e-10 69.7 77 46.8
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-10 69.7 75 36.0
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.9e-10 68.9 105 40.0
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.1e-10 68.6 107 34.6
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.4 78 43.6
Rhsim05G0108800 Rhododendron simsii HOM05D000808 ORTHO05D000863 1.1e-09 67.4 99 36.4
Rhsim05G0112400 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.1e-09 67.4 95 38.9
Rhsim10G0126300 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.5e-09 67.0 102 40.2
Lju99C6T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-09 66.6 65 38.5
CSS0023765 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 4.3e-09 65.5 67 49.3
CSS0048540 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 7.4e-09 64.7 67 49.3
RhsimUnG0164400 Rhododendron simsii HOM05D011579 ORTHO05D011435 7.4e-09 64.7 92 38.0
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-08 63.5 81 37.0
CSS0008763 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-08 63.2 67 47.8
CSS0020110 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-08 63.2 67 47.8
CSS0030884 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-08 63.2 67 47.8
CSS0045734 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-08 63.2 67 47.8
CSS0049005 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.2e-08 63.2 67 47.8
Rhsim05G0087700 Rhododendron simsii HOM05D011579 ORTHO05D011435 2.8e-08 62.8 93 37.6
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-08 62.0 85 35.3
RhsimUnG0076900 Rhododendron simsii HOM05D011579 ORTHO05D011435 6.3e-08 61.6 92 38.0
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 8.2e-08 61.2 101 29.7
CSS0036407 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 8.2e-08 61.2 68 48.5
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.4e-07 60.5 75 41.3
Rhsim04G0154500 Rhododendron simsii HOM05D011579 ORTHO05D011435 1.4e-07 60.5 92 37.0
PSO675G7301 Papaver somniferum HOM05D000176 ORTHO05D000106 1.8e-07 60.1 104 37.5
CSS0021615 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 2.4e-07 59.7 67 47.8
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 4.1e-07 58.9 115 36.5
TPR.G31932 Trifolium pratense HOM05D004942 ORTHO05D005687 5.3e-07 58.5 86 36.0
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 6.9e-07 58.2 96 37.5
Lj8A631T22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.2 58 34.5
Rhsim08G0127400 Rhododendron simsii HOM05D011579 ORTHO05D011435 9.0e-07 57.8 99 35.4
EL10As7g23796 Beta vulgaris HOM05D000176 ORTHO05D000106 1.5e-06 57.0 101 29.7
CSS0002224 Camellia sinensis var. sinensis HOM05D014304 ORTHO05D011435 1.5e-06 57.0 67 46.3
Lj7C368T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-06 56.6 62 30.6
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 2.6e-06 56.2 100 27.0
Lj9C53T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-06 56.2 57 36.8
EL10Ac1g01877 Beta vulgaris HOM05D018751 ORTHO05D012560 3.4e-06 55.8 109 32.1
EL10As6g23633 Beta vulgaris HOM05D000176 ORTHO05D000106 3.4e-06 55.8 101 30.7
Lj7C349T8 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 55.5 62 32.3
Aqoxy3G01281 Aquilegia oxysepala HOM05D025411 ORTHO05D000140 5.9e-06 55.1 106 27.4
Rhsim01G0119600 Rhododendron simsii HOM05D011579 ORTHO05D011435 7.7e-06 54.7 120 34.2
vmacro03392 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 7.7e-06 54.7 104 33.7
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 7.7e-06 54.7 104 33.7


User provided reference genes

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