Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01686 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 3.7e-93 344.7 160 100.0
Aqoxy4G00752 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.3e-18 97.1 116 41.4
Aqoxy1G03093 Aquilegia oxysepala HOM05D013112 ORTHO05D014824 2.8e-16 89.4 64 57.8
Aqoxy2G02139 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.4e-15 87.0 72 50.0
PSO832G1931 Papaver somniferum HOM05D000003 ORTHO05D000004 3.4e-14 82.4 175 33.1
PSO339G5198 Papaver somniferum HOM05D000155 ORTHO05D000022 6.1e-11 71.6 73 45.2
FvH4_6g46881 Fragaria vesca HOM05D000003 ORTHO05D000022 6.7e-10 68.2 174 28.7
RcHm_v2.0_Chr6g0291741 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-09 67.0 176 26.7
EL10Ac1g02234 Beta vulgaris HOM05D008685 ORTHO05D000022 3.3e-09 65.9 156 31.4
PSO541G1904 Papaver somniferum HOM05D000155 ORTHO05D000022 7.4e-09 64.7 74 43.2
Atru.chr10.857 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-08 62.8 74 41.9
PSO133G0054 Papaver somniferum HOM05D000003 ORTHO05D000004 2.8e-08 62.8 128 32.0
Aqoxy3G02350 Aquilegia oxysepala HOM05D013112 ORTHO05D000006 3.7e-08 62.4 57 49.1
COL.COLO4_23635 Corchorus olitorius HOM05D000155 ORTHO05D000022 3.7e-08 62.4 72 44.4
Thecc.04G017600 Theobroma cacao HOM05D000285 ORTHO05D000241 4.8e-08 62.0 70 44.3
QL07p015378 Quercus lobata HOM05D000155 ORTHO05D000022 1.1e-07 60.8 73 37.0
AUR62014524 Chenopodium quinoa HOM05D001049 ORTHO05D005951 1.4e-07 60.5 74 40.5
COL.COLO4_12315 Corchorus olitorius HOM05D000003 ORTHO05D000022 1.4e-07 60.5 72 40.3
RcHm_v2.0_Chr5g0041361 Rosa chinensis HOM05D000279 ORTHO05D000022 1.4e-07 60.5 73 41.1
Aqoxy7G00533 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.8e-07 60.1 61 42.6
PSO017G1972 Papaver somniferum HOM05D000003 ORTHO05D000004 1.8e-07 60.1 170 27.1
Aqoxy7G02362 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.4e-07 59.7 126 29.4
Os06g0683500 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 2.4e-07 59.7 69 44.9
PSO339G0911 Papaver somniferum HOM05D000003 ORTHO05D000022 2.4e-07 59.7 180 26.1
PSO566G0030 Papaver somniferum HOM05D000155 ORTHO05D000022 2.4e-07 59.7 71 45.1
QL01p007248 Quercus lobata HOM05D000003 ORTHO05D000022 2.4e-07 59.7 74 41.9
QL01p016224 Quercus lobata HOM05D000155 ORTHO05D000022 2.4e-07 59.7 74 41.9
MBI16_g11026_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.1e-07 59.3 74 37.8
Prupe.4G223300 Prunus persica HOM05D000279 ORTHO05D000022 4.1e-07 58.9 71 40.8
QL01p016208 Quercus lobata HOM05D000155 ORTHO05D000022 4.1e-07 58.9 74 41.9
QL01p016211 Quercus lobata HOM05D000155 ORTHO05D000022 4.1e-07 58.9 74 41.9
QL04p008062 Quercus lobata HOM05D000009 ORTHO05D000008 4.1e-07 58.9 71 40.8
CANSAT25G3451 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-07 58.5 167 26.9
MBI16_g11674_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.3e-07 58.5 74 39.2
Aqoxy1G01725 Aquilegia oxysepala HOM05D013112 ORTHO05D014824 6.9e-07 58.2 58 44.8
COL.COLO4_19293 Corchorus olitorius HOM05D000155 ORTHO05D000022 6.9e-07 58.2 72 38.9
MBI08_g34221_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.9e-07 58.2 120 30.0
MBI16_g08493_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.9e-07 58.2 74 43.2
Nitab4.5_0003252g0020 Nicotiana tabacum HOM05D008306 ORTHO05D004636 6.9e-07 58.2 72 44.4
Os02g0630250 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 6.9e-07 58.2 69 43.5
Atru.chr1.1701 Acer truncatum HOM05D000003 ORTHO05D000022 9.0e-07 57.8 71 43.7
Ciclev10021474m.g Citrus clementina HOM05D000003 ORTHO05D000022 9.0e-07 57.8 74 40.5
Lj4A86T98 Lonicera japonica HOM05D000650 ORTHO05D010020 9.0e-07 57.8 68 39.7
MBI07_g41529_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 9.0e-07 57.8 169 24.9
Os03g0158600 Oryza sativa ssp. japonica HOM05D000155 ORTHO05D000022 9.0e-07 57.8 72 48.6
FvH4_3g03751 Fragaria vesca HOM05D000155 ORTHO05D000022 1.2e-06 57.4 71 39.4
MBI18_g20209_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.2e-06 57.4 91 37.4
MD11G1210000 Malus domestica HOM05D000279 ORTHO05D000498 1.2e-06 57.4 68 38.2
PSO832G1326 Papaver somniferum HOM05D001761 ORTHO05D000022 1.2e-06 57.4 127 30.7
QL01p018268 Quercus lobata HOM05D000155 ORTHO05D000022 1.2e-06 57.4 74 41.9
QL02p058259 Quercus lobata HOM05D000155 ORTHO05D000022 1.2e-06 57.4 70 40.0
QL03p058466 Quercus lobata HOM05D000003 ORTHO05D000022 1.2e-06 57.4 75 38.7
QL93p0100_0664 Quercus lobata HOM05D000155 ORTHO05D000022 1.2e-06 57.4 70 40.0
Aqoxy4G02014 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 1.5e-06 57.0 50 50.0
CSS0047653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000022 1.5e-06 57.0 69 36.2
COL.COLO4_33037 Corchorus olitorius HOM05D000155 ORTHO05D000022 1.5e-06 57.0 105 30.5
Sp7g19540 Schrenkiella parvula HOM05D000155 ORTHO05D000022 1.5e-06 57.0 67 38.8
Atru.chr10.394 Acer truncatum HOM05D000003 ORTHO05D000022 2.0e-06 56.6 71 43.7
FvH4_3g23482 Fragaria vesca HOM05D000279 ORTHO05D000022 2.0e-06 56.6 69 40.6
MBI14_g01722_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.6 71 39.4
MBI14_g28582_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.0e-06 56.6 74 37.8
Prupe.7G199700 Prunus persica HOM05D000003 ORTHO05D000022 2.0e-06 56.6 105 33.3
MBI04_g00361_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.8 72 38.9
MBI09_g06634_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.4e-06 55.8 77 37.7
QL10p064615 Quercus lobata HOM05D000155 ORTHO05D000022 3.4e-06 55.8 72 38.9
RcHm_v2.0_Chr5g0005841 Rosa chinensis HOM05D000155 ORTHO05D000022 3.4e-06 55.8 73 38.4
RcHm_v2.0_Chr5g0016681 Rosa chinensis HOM05D000003 ORTHO05D000004 3.4e-06 55.8 74 40.5
BcaC09g51229 Brassica carinata HOM05D000155 ORTHO05D000022 4.5e-06 55.5 67 40.3
A01p12730 Brassica napus HOM05D000155 ORTHO05D000022 4.5e-06 55.5 67 40.3
C01p15320 Brassica napus HOM05D000155 ORTHO05D000022 4.5e-06 55.5 67 40.3
BolC1t01486H Brassica oleracea HOM05D000155 ORTHO05D000022 4.5e-06 55.5 67 40.3
BraA01t01216Z Brassica rapa HOM05D000155 ORTHO05D000022 4.5e-06 55.5 67 40.3
Cpa.g.sc21.40 Carica papaya HOM05D000650 ORTHO05D010020 4.5e-06 55.5 68 39.7
MBI08_g35488_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.5 74 37.8
MBI09_g40762_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.5 74 40.5
MBI17_g17650_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.5 72 41.7
MBI19_g34996_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 4.5e-06 55.5 113 31.9
Psat6g005280 Pisum sativum HOM05D017300 ORTHO05D000022 4.5e-06 55.5 73 39.7
Atru.chr1.956 Acer truncatum HOM05D000003 ORTHO05D000006 5.9e-06 55.1 192 25.5
Atru.chr7.1272 Acer truncatum HOM05D000003 ORTHO05D000167 5.9e-06 55.1 122 36.1
Aqoxy1G02301 Aquilegia oxysepala HOM05D000155 ORTHO05D000022 5.9e-06 55.1 118 28.0
Aqoxy2G01964 Aquilegia oxysepala HOM05D000003 ORTHO05D006738 5.9e-06 55.1 71 42.3
AUR62034035 Chenopodium quinoa HOM05D000003 ORTHO05D000006 5.9e-06 55.1 110 28.2
COL.COLO4_27635 Corchorus olitorius HOM05D000003 ORTHO05D000022 5.9e-06 55.1 73 38.4
MBI13_g15303_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 55.1 74 35.1
MBI14_g06611_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 55.1 126 28.6
MBI15_g26834_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 5.9e-06 55.1 74 40.5
PSO832G1790 Papaver somniferum HOM05D000003 ORTHO05D001026 5.9e-06 55.1 79 35.4
PGR031G0166 Punica granatum HOM05D000155 ORTHO05D000022 5.9e-06 55.1 67 40.3
QL01p000475 Quercus lobata HOM05D000155 ORTHO05D000022 5.9e-06 55.1 69 44.9
QL01p000570 Quercus lobata HOM05D000155 ORTHO05D000022 5.9e-06 55.1 69 44.9
QL08p061842 Quercus lobata HOM05D000003 ORTHO05D000004 5.9e-06 55.1 72 38.9
Atru.chr7.668 Acer truncatum HOM05D000003 ORTHO05D000004 7.7e-06 54.7 76 40.8
FAN08G0911 Fragaria x ananassa HOM05D025101 ORTHO05D000022 7.7e-06 54.7 66 40.9
Hma1.2p1_0337F.1_g129285 Hydrangea macrophylla HOM05D044476 ORTHO05D002259 7.7e-06 54.7 88 37.5
Hma1.2p1_0337F.1_g129340 Hydrangea macrophylla HOM05D044476 ORTHO05D002259 7.7e-06 54.7 88 37.5
MBI07_g18987_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.7 74 37.8
MBI14_g44640_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.7e-06 54.7 74 37.8
MBI18_g07591_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000022 7.7e-06 54.7 73 41.1
PSO339G1433 Papaver somniferum HOM05D000003 ORTHO05D000004 7.7e-06 54.7 77 36.4
Psat2g152240 Pisum sativum HOM05D000003 ORTHO05D000022 7.7e-06 54.7 165 27.3
RcHm_v2.0_Chr7g0229351 Rosa chinensis HOM05D009322 ORTHO05D010713 7.7e-06 54.7 72 37.5
Actinidia26986 Actinidia chinensis HOM05D000774 ORTHO05D000602 1.0e-05 54.3 70 37.1
Duzib128G1172 Durio zibethinus HOM05D000155 ORTHO05D000022 1.0e-05 54.3 72 37.5
FvH4_2g12061 Fragaria vesca HOM05D000003 ORTHO05D000022 1.0e-05 54.3 77 37.7
MBI05_g32513_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-05 54.3 74 39.2
MBI15_g22203_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.0e-05 54.3 72 43.1
PSO170G3074 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-05 54.3 79 34.2
PSO339G5018 Papaver somniferum HOM05D000003 ORTHO05D000004 1.0e-05 54.3 72 38.9
PSO675G3803 Papaver somniferum HOM05D000003 ORTHO05D001026 1.0e-05 54.3 91 37.4
QL03p009351 Quercus lobata HOM05D000003 ORTHO05D000167 1.0e-05 54.3 158 28.5


User provided reference genes

Program Settings