Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01616 Aquilegia oxysepala HOM05D003068 ORTHO05D003444 7.4e-74 280.4 138 100.0
Aqoxy3G01640 Aquilegia oxysepala HOM05D003068 ORTHO05D003444 5.0e-30 134.8 85 75.3
Aqoxy3G01615 Aquilegia oxysepala HOM05D003068 ORTHO05D003444 1.3e-17 93.6 57 80.7
Gohir.D09G038700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 3.0e-14 82.4 80 50.0
Gorai.006G044200 Gossypium raimondii HOM05D003068 ORTHO05D003444 3.0e-14 82.4 80 50.0
COL.COLO4_13295 Corchorus olitorius HOM05D003068 ORTHO05D003444 3.9e-14 82.0 80 53.8
Manes.04G088200 Manihot esculenta HOM05D003068 ORTHO05D003444 1.9e-13 79.7 84 51.2
PSO017G0558 Papaver somniferum HOM05D003068 ORTHO05D003444 2.5e-13 79.3 83 49.4
PSO478G2322 Papaver somniferum HOM05D003068 ORTHO05D003444 2.5e-13 79.3 83 50.6
TWI32G0157 Tripterygium wilfordii HOM05D003068 ORTHO05D003444 7.3e-13 77.8 120 40.0
GSVIVG01033051001 Vitis vinifera HOM05D003068 ORTHO05D003444 7.3e-13 77.8 77 50.6
Potri.017G069220 Populus trichocarpa HOM05D003068 ORTHO05D003444 9.5e-13 77.4 80 51.2
COL.COLO4_13296 Corchorus olitorius HOM05D003068 ORTHO05D003444 1.2e-12 77.0 80 50.0
PSO017G1912 Papaver somniferum HOM05D003068 ORTHO05D003444 1.2e-12 77.0 84 46.4
PSO478G5081 Papaver somniferum HOM05D003068 ORTHO05D003444 1.2e-12 77.0 84 46.4
Ciclev10014024m.g Citrus clementina HOM05D003068 ORTHO05D003444 1.6e-12 76.6 79 49.4
Gohir.A11G067700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 1.6e-12 76.6 80 48.8
Zm00001eb364090 Zea mays HOM05D003068 ORTHO05D003444 2.1e-12 76.3 79 50.6
Gohir.D11G058700 Gossypium hirsutum HOM05D003068 ORTHO05D003444 2.8e-12 75.9 80 48.8
Gohir.D11G066300 Gossypium hirsutum HOM05D003068 ORTHO05D003444 2.8e-12 75.9 80 48.8
Gorai.007G071700 Gossypium raimondii HOM05D003068 ORTHO05D003444 2.8e-12 75.9 80 48.8
Gorai.007G071800 Gossypium raimondii HOM05D003068 ORTHO05D003444 2.8e-12 75.9 80 48.8
Zm00001eb364080 Zea mays HOM05D003068 ORTHO05D003444 2.8e-12 75.9 79 50.6
Sabra17G0058900 Salix brachista HOM05D003068 ORTHO05D003444 3.6e-12 75.5 80 48.8
QL02p070794 Quercus lobata HOM05D003068 ORTHO05D003444 4.7e-12 75.1 80 48.8
Oeu011351.2 Olea europaea HOM05D003068 ORTHO05D003444 1.1e-11 73.9 84 47.6
Lalb_Chr22g0360251 Lupinus albus HOM05D003068 ORTHO05D003444 1.8e-11 73.2 78 51.3
Duzib251G0076 Durio zibethinus HOM05D003068 ORTHO05D003444 3.1e-11 72.4 88 48.9
Manes.12G007400 Manihot esculenta HOM05D003068 ORTHO05D003444 3.1e-11 72.4 83 43.4
Manes.13G007800 Manihot esculenta HOM05D003068 ORTHO05D003444 3.1e-11 72.4 82 50.0
ATR0582G309 Amborella trichopoda HOM05D003068 ORTHO05D003444 4.0e-11 72.0 80 46.2
Cpa.g.sc360.3 Carica papaya HOM05D003068 ORTHO05D003444 4.0e-11 72.0 84 42.9
Gohir.A11G062500 Gossypium hirsutum HOM05D003068 ORTHO05D003444 4.0e-11 72.0 80 46.2
CiPaw.05G106000 Carya illinoinensis HOM05D003068 ORTHO05D003444 5.2e-11 71.6 80 50.0
Prupe.1G221600 Prunus persica HOM05D003068 ORTHO05D003444 5.2e-11 71.6 82 48.8
Ciclev10030493m.g Citrus clementina HOM05D003068 ORTHO05D003444 1.2e-10 70.5 80 50.0
Phvul.001G089500 Phaseolus vulgaris HOM05D003068 ORTHO05D003444 1.2e-10 70.5 79 48.1
FvH4_6g53851 Fragaria vesca HOM05D003068 ORTHO05D003444 1.5e-10 70.1 80 51.2
FAN05G1891 Fragaria x ananassa HOM05D003068 ORTHO05D003444 1.5e-10 70.1 80 51.2
Oeu044469.1 Olea europaea HOM05D003068 ORTHO05D003444 2.0e-10 69.7 84 45.2
FvH4_4g23270 Fragaria vesca HOM05D003068 ORTHO05D003444 2.6e-10 69.3 93 41.9
FAN12G3359 Fragaria x ananassa HOM05D003068 ORTHO05D003444 2.6e-10 69.3 93 41.9
FAN17G2511 Fragaria x ananassa HOM05D003068 ORTHO05D003444 2.6e-10 69.3 93 41.9
FAN14G4132 Fragaria x ananassa HOM05D003068 ORTHO05D003444 3.4e-10 68.9 80 51.2
unitig_749.g13315 Utricularia gibba HOM05D003068 ORTHO05D003444 3.4e-10 68.9 84 44.0
Cc11_g17310 Coffea canephora HOM05D003068 ORTHO05D003444 5.8e-10 68.2 83 44.6
Lalb_Chr00c01g0403831 Lupinus albus HOM05D003068 ORTHO05D003444 5.8e-10 68.2 79 48.1
SGA_v2.0_scaffold228G43258 Striga asiatica HOM05D003068 ORTHO05D003444 7.5e-10 67.8 84 45.2
CAN.G75.8 Capsicum annuum HOM05D003068 ORTHO05D003444 9.8e-10 67.4 83 42.2
Cpa.g.sc360.5 Carica papaya HOM05D003068 ORTHO05D003444 9.8e-10 67.4 74 47.3
Hund06111 Selenicereus undatus HOM05D003068 ORTHO05D003444 1.7e-09 66.6 83 43.4
Solyc05g015920.3 Solanum lycopersicum HOM05D003068 ORTHO05D003444 1.7e-09 66.6 83 42.2
Sopen05g012000 Solanum pennellii HOM05D003068 ORTHO05D003444 1.7e-09 66.6 83 42.2
Sopen05g012020 Solanum pennellii HOM05D003068 ORTHO05D003444 1.7e-09 66.6 83 42.2
TPR.G8567 Trifolium pratense HOM05D003068 ORTHO05D003444 1.7e-09 66.6 79 45.6
CAN.G31.3 Capsicum annuum HOM05D003068 ORTHO05D003444 2.2e-09 66.2 83 42.2
Duzib248G1470 Durio zibethinus HOM05D003068 ORTHO05D003444 2.2e-09 66.2 105 41.0
Glyma.16G053500 Glycine max HOM05D003068 ORTHO05D003444 2.2e-09 66.2 79 45.6
TAR374G1567 Trochodendron aralioides HOM05D003068 ORTHO05D003444 3.7e-09 65.5 79 43.0
Rhsim12G0023100 Rhododendron simsii HOM05D003068 ORTHO05D003444 4.9e-09 65.1 79 50.6
CDE05G1424 Ceratophyllum demersum HOM05D003068 ORTHO05D003444 6.4e-09 64.7 87 43.7
Psat3g160840 Pisum sativum HOM05D003068 ORTHO05D003444 6.4e-09 64.7 79 44.3
AL1G40620 Arabidopsis lyrata HOM05D003068 ORTHO05D003444 1.4e-08 63.5 79 45.6
MELO3C022336.2 Cucumis melo HOM05D003068 ORTHO05D003444 1.4e-08 63.5 76 39.5
DCAR_024651 Daucus carota HOM05D003068 ORTHO05D003444 1.4e-08 63.5 80 42.5
Nitab4.5_0004878g0010 Nicotiana tabacum HOM05D003068 ORTHO05D003444 1.4e-08 63.5 77 44.2
PGSC0003DMG400010805 Solanum tuberosum HOM05D003068 ORTHO05D003444 1.4e-08 63.5 83 41.0
Nitab4.5_0001771g0100 Nicotiana tabacum HOM05D003068 ORTHO05D003444 1.9e-08 63.2 77 44.2
Lj6A832T38 Lonicera japonica HOM05D003068 ORTHO05D003444 2.4e-08 62.8 82 47.6
Peaxi162Scf00128g01613 Petunia axillaris HOM05D003068 ORTHO05D003444 2.4e-08 62.8 83 42.2
Sed0008887 Sechium edule HOM05D003068 ORTHO05D003444 3.2e-08 62.4 77 40.3
ClCG06G001930 Citrullus lanatus HOM05D003068 ORTHO05D003444 4.1e-08 62.0 76 39.5
AL1G40840 Arabidopsis lyrata HOM05D003068 ORTHO05D003444 5.4e-08 61.6 79 44.3
CsaV3_6G007980 Cucumis sativus L. HOM05D003068 ORTHO05D003444 7.1e-08 61.2 76 40.8
Lalb_Chr21g0316871 Lupinus albus HOM05D003068 ORTHO05D003444 7.1e-08 61.2 78 43.6
FAN07G2860 Fragaria x ananassa HOM05D003068 ORTHO05D003444 9.2e-08 60.8 93 38.7
Nn4g22239 Nelumbo nucifera HOM05D003068 ORTHO05D003444 1.2e-07 60.5 58 56.9
Sed0000746 Sechium edule HOM05D003068 ORTHO05D003444 2.7e-07 59.3 76 39.5
CDE05G0933 Ceratophyllum demersum HOM05D003068 ORTHO05D003444 7.8e-07 57.8 78 43.6
PGR102G3269 Punica granatum HOM05D003068 ORTHO05D003444 1.0e-06 57.4 61 45.9


User provided reference genes

Program Settings