Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01577 Aquilegia oxysepala HOM05D006962 ORTHO05D008696 1.1e-94 350.1 198 100.0
GSVIVG01010505001 Vitis vinifera HOM05D006962 ORTHO05D008696 2.8e-26 122.9 200 46.5
TAR629G1477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 4.1e-25 119.0 189 45.0
Nn3g16434 Nelumbo nucifera HOM05D006962 ORTHO05D008696 5.0e-23 112.1 162 46.3
QL03p052240 Quercus lobata HOM05D006962 ORTHO05D008696 8.5e-23 111.3 188 44.7
TWI75G0385 Tripterygium wilfordii HOM05D006962 ORTHO05D008696 4.2e-22 109.0 168 42.3
Dinv17575 Davidia involucrata HOM05D006962 ORTHO05D008696 1.2e-21 107.5 167 43.7
TAR636G2109 Trochodendron aralioides HOM05D006962 ORTHO05D008696 1.6e-21 107.1 183 41.0
CiPaw.05G108100 Carya illinoinensis HOM05D006962 ORTHO05D008696 2.7e-21 106.3 196 42.3
Cfa009377 Carpinus fangiana HOM05D006962 ORTHO05D008696 6.1e-21 105.1 193 42.0
Ca_16448_v3 Cicer arietinum L. HOM05D006962 ORTHO05D008696 1.4e-20 104.0 161 46.0
Eucgr.B03508 Eucalyptus grandis HOM05D006962 ORTHO05D008696 1.4e-20 104.0 155 41.9
Prupe.1G224100 Prunus persica HOM05D006962 ORTHO05D008696 1.8e-20 103.6 187 41.7
PGR102G1052 Punica granatum HOM05D006962 ORTHO05D008696 2.6e-19 99.8 123 47.2
Duzib251G0823 Durio zibethinus HOM05D006962 ORTHO05D008696 4.4e-19 99.0 181 43.1
CSS0033119 Camellia sinensis var. sinensis HOM05D006962 ORTHO05D008696 7.5e-19 98.2 186 40.9
Cc11_g17050 Coffea canephora HOM05D006962 ORTHO05D008696 7.5e-19 98.2 152 41.4
AUR62028912 Chenopodium quinoa HOM05D006962 ORTHO05D008696 9.8e-19 97.8 148 43.2
Haze_12436 Corylus avellana HOM05D006962 ORTHO05D008696 9.8e-19 97.8 166 44.0
VMungo1383G1469 Vigna mungo HOM05D006962 ORTHO05D008696 1.3e-18 97.4 177 37.3
MBI07_g28246_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 2.2e-18 96.7 184 39.7
MD16G1121100 Malus domestica HOM05D006962 ORTHO05D008696 4.8e-18 95.5 150 40.7
Sabra01G0041700 Salix brachista HOM05D000660 ORTHO05D000766 6.3e-18 95.1 149 45.0
Sc14g0009120 Simmondsia chinensis HOM05D006962 ORTHO05D008696 8.3e-18 94.7 186 36.6
TAR629G0477 Trochodendron aralioides HOM05D006962 ORTHO05D008696 8.3e-18 94.7 109 53.2
MBI07_g11269_MAGBIO Magnolia biondii HOM05D006962 ORTHO05D008696 1.8e-17 93.6 184 38.6
FvH4_4g23570 Fragaria vesca HOM05D006962 ORTHO05D008696 2.4e-17 93.2 183 36.6
Glyma.18G005200 Glycine max HOM05D006962 ORTHO05D008696 4.1e-17 92.4 179 37.4
Psat5g097440 Pisum sativum HOM05D006962 ORTHO05D008696 7.0e-17 91.7 149 43.6
CANSAT01G0828 Cannabis sativa HOM05D006962 ORTHO05D008696 9.1e-17 91.3 190 39.5
Ciclev10032798m.g Citrus clementina HOM05D006962 ORTHO05D008696 9.1e-17 91.3 193 37.8
Gohir.D04G183600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 9.1e-17 91.3 197 33.0
PSO017G7099 Papaver somniferum HOM05D006962 ORTHO05D008696 1.2e-16 90.9 170 40.6
Gorai.012G176600 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.6e-16 90.5 197 32.5
AUR62005637 Chenopodium quinoa HOM05D006962 ORTHO05D008696 2.0e-16 90.1 158 38.0
Thecc.02G205200 Theobroma cacao HOM05D006962 ORTHO05D008696 2.0e-16 90.1 201 35.8
Manes.13G010300 Manihot esculenta HOM05D006962 ORTHO05D008696 2.7e-16 89.7 172 38.4
RcHm_v2.0_Chr4g0429971 Rosa chinensis HOM05D006962 ORTHO05D008696 2.7e-16 89.7 192 40.1
Lj6g0020338 Lotus japonicus HOM05D006962 ORTHO05D008696 3.5e-16 89.4 171 36.3
THA.LOC104807506 Tarenaya hassleriana HOM05D006962 ORTHO05D008696 3.5e-16 89.4 198 36.4
PSO478G2808 Papaver somniferum HOM05D006962 ORTHO05D008696 4.5e-16 89.0 167 39.5
Atru.chr11.2343 Acer truncatum HOM05D006962 ORTHO05D008696 1.7e-15 87.0 91 50.5
Potri.001G057700 Populus trichocarpa HOM05D006962 ORTHO05D008696 2.2e-15 86.7 180 39.4
Phvul.001G262900 Phaseolus vulgaris HOM05D006962 ORTHO05D008696 2.9e-15 86.3 166 38.0
Actinidia08062 Actinidia chinensis HOM05D006962 ORTHO05D008696 3.8e-15 85.9 108 50.9
COL.COLO4_20424 Corchorus olitorius HOM05D006962 ORTHO05D008696 3.8e-15 85.9 191 35.6
Gohir.A04G140400 Gossypium hirsutum HOM05D006962 ORTHO05D008696 6.5e-15 85.1 198 32.3
Ah.03g136040 Amaranthus hybridus HOM05D006962 ORTHO05D008696 8.5e-15 84.7 113 45.1
Medtr3g085060 Medicago truncatula HOM05D006962 ORTHO05D008696 8.5e-15 84.7 176 36.9
ATR0561G196 Amborella trichopoda HOM05D006962 ORTHO05D008696 1.1e-14 84.3 94 48.9
Sed0011154 Sechium edule HOM05D006962 ORTHO05D008696 1.1e-14 84.3 138 40.6
ClCG06G002190 Citrullus lanatus HOM05D006962 ORTHO05D008696 1.5e-14 84.0 178 36.0
Peaxi162Scf00128g01332 Petunia axillaris HOM05D006962 ORTHO05D008696 1.5e-14 84.0 153 39.2
MSTRG.13306 Avicennia marina HOM05D006962 ORTHO05D008696 2.5e-14 83.2 194 39.2
TPR.G17769 Trifolium pratense HOM05D006962 ORTHO05D008696 3.2e-14 82.8 166 36.7
Gohir.D02G147600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 1.2e-13 80.9 183 36.1
Os02g0509600 Oryza sativa ssp. japonica HOM05D006962 ORTHO05D008696 2.1e-13 80.1 96 45.8
Nitab4.5_0006369g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 2.7e-13 79.7 168 36.3
SGA_v2.0_scaffold87G27164 Striga asiatica HOM05D006962 ORTHO05D008696 6.1e-13 78.6 102 47.1
Glyma.11G251800 Glycine max HOM05D006962 ORTHO05D008696 8.0e-13 78.2 109 45.9
MELO3C022311.2 Cucumis melo HOM05D006962 ORTHO05D008696 1.0e-12 77.8 178 35.4
Sabra03G0124800 Salix brachista HOM05D006962 ORTHO05D008696 1.0e-12 77.8 186 34.4
HanXRQChr08g0214941 Helianthus annuus HOM05D006962 ORTHO05D008696 1.4e-12 77.4 116 44.0
Hma1.2p1_0657F.1_g197165 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.4e-12 77.4 107 43.9
Hma1.2p1_0967F.1_g242360 Hydrangea macrophylla HOM05D006962 ORTHO05D008696 1.4e-12 77.4 107 43.9
Potri.003G170700 Populus trichocarpa HOM05D006962 ORTHO05D008696 1.4e-12 77.4 155 37.4
C07p17910 Brassica napus HOM05D006962 ORTHO05D008696 1.8e-12 77.0 194 35.6
ECA234G1956 Erigeron canadensis HOM05D006962 ORTHO05D008696 1.8e-12 77.0 58 63.8
Gorai.005G165400 Gossypium raimondii HOM05D006962 ORTHO05D008696 1.8e-12 77.0 183 35.0
CDE05G3434 Ceratophyllum demersum HOM05D006962 ORTHO05D008696 2.3e-12 76.6 157 36.9
BolC7t42297H Brassica oleracea HOM05D006962 ORTHO05D008696 3.0e-12 76.3 194 35.6
ClCG07G015460 Citrullus lanatus HOM05D006962 ORTHO05D008696 3.0e-12 76.3 181 34.8
Migut.E00010 Erythranthe guttata HOM05D006962 ORTHO05D008696 4.0e-12 75.9 171 35.7
Gohir.A03G124600 Gossypium hirsutum HOM05D006962 ORTHO05D008696 4.0e-12 75.9 144 40.3
Nitab4.5_0000996g0010 Nicotiana tabacum HOM05D006962 ORTHO05D008696 5.2e-12 75.5 168 35.1
CsaV3_6G008260 Cucumis sativus L. HOM05D006962 ORTHO05D008696 6.8e-12 75.1 177 35.0
Sopen05g011100 Solanum pennellii HOM05D006962 ORTHO05D008696 6.8e-12 75.1 150 36.0
Cpa.g.sc43.75 Carica papaya HOM05D006962 ORTHO05D008696 1.5e-11 73.9 175 34.3
Zm00001eb180910 Zea mays HOM05D006962 ORTHO05D008696 1.5e-11 73.9 164 35.4
Lalb_Chr23g0278151 Lupinus albus HOM05D006962 ORTHO05D008696 2.0e-11 73.6 150 34.0
Hund25473 Selenicereus undatus HOM05D006962 ORTHO05D008696 2.0e-11 73.6 153 32.0
Lsat_1_v5_gn_4_641 Lactuca sativa HOM05D006962 ORTHO05D008696 2.6e-11 73.2 93 45.2
Rhsim12G0024900 Rhododendron simsii HOM05D006962 ORTHO05D008696 5.7e-11 72.0 163 33.1
arahy.Tifrunner.gnm1.ann1.AWLH2F Arachis hypogaea HOM05D006962 ORTHO05D008696 7.5e-11 71.6 153 37.9
HPP92_023534 Vanilla planifolia HOM05D006962 ORTHO05D008696 7.5e-11 71.6 123 40.7
MELO3C032628.2 Cucumis melo HOM05D006962 ORTHO05D008696 2.2e-10 70.1 113 43.4
PGSC0003DMG400034312 Solanum tuberosum HOM05D006962 ORTHO05D008696 3.7e-10 69.3 182 34.6
AL1G40700 Arabidopsis lyrata HOM05D006962 ORTHO05D008696 4.9e-10 68.9 123 37.4
Zm00001eb241800 Zea mays HOM05D006962 ORTHO05D008696 6.3e-10 68.6 145 38.6
A09p38640 Brassica napus HOM05D006962 ORTHO05D008696 8.3e-10 68.2 150 35.3
BraA09t39370Z Brassica rapa HOM05D006962 ORTHO05D008696 8.3e-10 68.2 150 35.3
C05p26000 Brassica napus HOM05D006962 ORTHO05D008696 1.1e-09 67.8 153 37.9
BolC5t31319H Brassica oleracea HOM05D006962 ORTHO05D008696 2.4e-09 66.6 153 37.3
Gohir.D03G043133 Gossypium hirsutum HOM05D006962 ORTHO05D008696 3.1e-09 66.2 68 50.0
Solyc05g015640.3 Solanum lycopersicum HOM05D006962 ORTHO05D008696 4.1e-09 65.9 181 31.5
Aa31LG7G9900 Aethionema arabicum HOM05D006962 ORTHO05D008696 5.4e-09 65.5 122 36.9
Thhalv10008828m.g Eutrema salsugineum HOM05D006962 ORTHO05D008696 5.4e-09 65.5 151 33.1
BcaNung06812 Brassica carinata HOM05D006962 ORTHO05D008696 7.0e-09 65.1 191 31.4
BcaC05g26545 Brassica carinata HOM05D006962 ORTHO05D008696 1.2e-08 64.3 151 35.1
BcaC05g26736 Brassica carinata HOM05D006962 ORTHO05D008696 1.2e-08 64.3 150 34.7
CAN.G1124.2 Capsicum annuum HOM05D006962 ORTHO05D008696 1.2e-08 64.3 178 30.9
DCAR_007000 Daucus carota HOM05D006962 ORTHO05D008696 2.0e-08 63.5 116 38.8
Sp1g23540 Schrenkiella parvula HOM05D006962 ORTHO05D008696 4.5e-08 62.4 193 31.1
Carub.0001s2583 Capsella rubella HOM05D006962 ORTHO05D008696 1.0e-07 61.2 57 47.4
AagrBONN_evm.TU.Sc2ySwM_228.653 Anthoceros agrestis HOM05D002663 ORTHO05D021316 1.3e-07 60.8 91 39.6
Gorai.003G044100 Gossypium raimondii HOM05D006962 ORTHO05D008696 2.9e-07 59.7 74 45.9
BcaB03g14005 Brassica carinata HOM05D006962 ORTHO05D008696 5.0e-07 58.9 191 29.8
CsaV3_4G003050 Cucumis sativus L. HOM05D006962 ORTHO05D008696 5.0e-07 58.9 182 32.4
CARHR026870 Cardamine hirsuta HOM05D006962 ORTHO05D008696 1.9e-06 57.0 152 34.9
BraA07t28983Z Brassica rapa HOM05D006962 ORTHO05D008696 3.3e-06 56.2 192 28.6
A07p11980 Brassica napus HOM05D006962 ORTHO05D008696 5.6e-06 55.5 192 28.6


User provided reference genes

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