Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01571 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 3.0e-136 488.8 302 100.0
Aqoxy5G02696 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 7.3e-42 175.3 98 93.9
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.3e-19 101.3 173 43.9
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 3.9e-19 99.8 183 39.9
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 1.3e-17 94.7 147 43.5
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 6.3e-17 92.4 202 36.6
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 6.3e-17 92.4 214 34.6
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 8.2e-17 92.0 78 62.8
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 8.2e-17 92.0 180 38.9
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 1.1e-16 91.7 174 39.7
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 3.1e-16 90.1 143 40.6
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 3.1e-16 90.1 190 36.8
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 4.1e-16 89.7 186 36.0
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 1.2e-15 88.2 186 35.5
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 1.5e-15 87.8 68 63.2
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 1.5e-15 87.8 68 63.2
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 2.0e-15 87.4 168 41.7
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 2.0e-15 87.4 72 59.7
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 2.6e-15 87.0 211 38.4
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 2.6e-15 87.0 64 62.5
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.6e-15 87.0 199 38.2
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 3.4e-15 86.7 61 63.9
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 3.4e-15 86.7 183 35.5
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 4.5e-15 86.3 187 35.3
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 4.5e-15 86.3 102 46.1
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 4.5e-15 86.3 68 63.2
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 5.9e-15 85.9 72 61.1
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 5.9e-15 85.9 97 48.5
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 7.6e-15 85.5 64 60.9
PSO384G3220 Papaver somniferum HOM05D007490 ORTHO05D008750 3.8e-14 83.2 152 42.1
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 5.0e-14 82.8 61 63.9
arahy.Tifrunner.gnm1.ann1.QGQ977 Arachis hypogaea HOM05D007490 ORTHO05D008750 5.0e-14 82.8 61 63.9
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 5.0e-14 82.8 179 36.9
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 6.5e-14 82.4 233 33.9
unitig_0.g2659 Utricularia gibba HOM05D007490 ORTHO05D008750 6.5e-14 82.4 63 60.3
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 8.4e-14 82.0 61 63.9
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 8.4e-14 82.0 61 63.9
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 8.4e-14 82.0 191 33.5
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 8.4e-14 82.0 157 41.4
SalBow3G0554 Salvia bowleyana HOM05D007490 ORTHO05D008750 1.4e-13 81.3 137 39.4
Sopen10g030750 Solanum pennellii HOM05D015445 ORTHO05D008750 1.4e-13 81.3 63 63.5
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 1.9e-13 80.9 175 37.7
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.9e-13 80.9 67 61.2
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 2.5e-13 80.5 95 45.3
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 3.2e-13 80.1 218 30.7
Migut.K00089 Erythranthe guttata HOM05D007490 ORTHO05D008750 4.2e-13 79.7 68 58.8
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 4.2e-13 79.7 199 38.7
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 4.2e-13 79.7 170 40.0
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 5.5e-13 79.3 184 35.9
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 5.5e-13 79.3 207 34.3
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 7.2e-13 79.0 64 60.9
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 7.2e-13 79.0 107 46.7
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 1.6e-12 77.8 107 46.7
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 6.1e-12 75.9 61 57.4
SHI15744 Sapria himalayana HOM05D007490 ORTHO05D008750 6.1e-12 75.9 64 59.4
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 6.1e-12 75.9 61 60.7
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 7.9e-12 75.5 64 57.8
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 1.3e-11 74.7 64 56.2
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 1.3e-11 74.7 64 56.2
PSO339G3404 Papaver somniferum HOM05D007490 ORTHO05D008750 1.8e-11 74.3 203 34.5
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 3.0e-11 73.6 192 33.3
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 6.7e-11 72.4 71 50.7
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 6.7e-11 72.4 64 54.7
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 8.7e-11 72.0 192 37.0
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 5.7e-10 69.3 120 41.7
MD14G1067100 Malus domestica HOM05D007490 ORTHO05D008750 9.7e-10 68.6 109 39.4
ECA236G0950 Erigeron canadensis HOM05D007490 ORTHO05D008750 1.6e-09 67.8 65 53.8
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 6.3e-09 65.9 93 43.0
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 6.3e-09 65.9 96 41.7
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 6.3e-09 65.9 96 41.7
SEGI_14290 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.3e-09 65.9 65 52.3
SEGI_34104 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 6.3e-09 65.9 65 52.3
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 1.8e-08 64.3 93 41.9
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 2.4e-08 63.9 67 53.7
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 4.1e-08 63.2 191 30.4
SEGI_37898 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 5.3e-08 62.8 46 60.9
SEGI_24459 Sequoiadendron giganteum HOM05D007490 ORTHO05D008750 3.4e-07 60.1 45 57.8
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 5.9e-07 59.3 181 32.6
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 7.7e-07 58.9 214 28.0
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 5.0e-06 56.2 159 32.1
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 8.5e-06 55.5 41 63.4


User provided reference genes

Program Settings