Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01545 Aquilegia oxysepala HOM05D000976 ORTHO05D038508 9.3e-62 240.0 116 100.0
GSVIVG01010471001 Vitis vinifera HOM05D000976 ORTHO05D000847 1.0e-20 103.6 62 72.6
TWI75G1418 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 7.5e-19 97.4 61 73.8
Manes.12G012400 Manihot esculenta HOM05D000976 ORTHO05D000847 1.3e-18 96.7 78 62.8
Potri.008G175301 Populus trichocarpa HOM05D000976 ORTHO05D000847 1.7e-18 96.3 78 62.8
Thecc.02G209900 Theobroma cacao HOM05D000976 ORTHO05D000847 3.7e-18 95.1 61 72.1
Dinv14833 Davidia involucrata HOM05D000976 ORTHO05D000847 4.8e-18 94.7 62 71.0
TAR622G0108 Trochodendron aralioides HOM05D000976 ORTHO05D000847 4.8e-18 94.7 62 69.4
MELO3C011870.2 Cucumis melo HOM05D000976 ORTHO05D000847 6.3e-18 94.4 61 68.9
Duzib251G0423 Durio zibethinus HOM05D000976 ORTHO05D000847 1.1e-17 93.6 78 64.1
CsaV3_5G030320 Cucumis sativus L. HOM05D000976 ORTHO05D000847 1.8e-17 92.8 61 68.9
TWI36G1522 Tripterygium wilfordii HOM05D000976 ORTHO05D000847 2.4e-17 92.4 62 67.7
Potri.010G060700 Populus trichocarpa HOM05D000976 ORTHO05D000847 3.1e-17 92.0 59 71.2
Duzib248G1209 Durio zibethinus HOM05D000976 ORTHO05D000847 4.1e-17 91.7 61 72.1
CiPaw.05G111000 Carya illinoinensis HOM05D000976 ORTHO05D000847 1.6e-16 89.7 61 70.5
PSO478G3255 Papaver somniferum HOM05D000976 ORTHO05D000847 1.6e-16 89.7 66 66.7
Ciclev10032373m.g Citrus clementina HOM05D000976 ORTHO05D000847 4.5e-16 88.2 74 58.1
Eucgr.B03488 Eucalyptus grandis HOM05D000976 ORTHO05D000847 1.3e-15 86.7 80 56.2
Atru.chr11.2311 Acer truncatum HOM05D000976 ORTHO05D000847 1.7e-15 86.3 54 68.5
Gorai.005G168500 Gossypium raimondii HOM05D000976 ORTHO05D000847 1.7e-15 86.3 61 65.6
EL10Ac6g13490 Beta vulgaris HOM05D000976 ORTHO05D000847 2.2e-15 85.9 45 82.2
Hma1.2p1_0065F.1_g035590 Hydrangea macrophylla HOM05D000976 ORTHO05D000847 2.9e-15 85.5 62 62.9
PSO017G7373 Papaver somniferum HOM05D000976 ORTHO05D000847 2.9e-15 85.5 84 53.6
Hund25461 Selenicereus undatus HOM05D000976 ORTHO05D000847 5.0e-15 84.7 51 70.6
RcHm_v2.0_Chr4g0430431 Rosa chinensis HOM05D000976 ORTHO05D000847 1.1e-14 83.6 86 48.8
CANSAT01G2890 Cannabis sativa HOM05D000976 ORTHO05D000847 1.5e-14 83.2 57 64.9
Cc00_g13500 Coffea canephora HOM05D000976 ORTHO05D000847 2.5e-14 82.4 62 64.5
Nn3g16479 Nelumbo nucifera HOM05D000976 ORTHO05D000847 2.5e-14 82.4 60 61.7
Medtr3g085460 Medicago truncatula HOM05D000976 ORTHO05D000847 3.2e-14 82.0 50 72.0
MD13G1118100 Malus domestica HOM05D000976 ORTHO05D000847 4.2e-14 81.6 70 54.3
ClCG11G013710 Citrullus lanatus HOM05D000976 ORTHO05D000847 5.5e-14 81.3 54 64.8
Sc04g0010090 Simmondsia chinensis HOM05D000976 ORTHO05D000847 7.2e-14 80.9 55 67.3
Glyma.18G007400 Glycine max HOM05D000976 ORTHO05D000847 1.2e-13 80.1 45 75.6
Sed0015559 Sechium edule HOM05D000976 ORTHO05D000847 3.6e-13 78.6 67 64.2
VMungo1383G2492 Vigna mungo HOM05D000976 ORTHO05D000847 3.6e-13 78.6 45 73.3
Glyma.11G249800 Glycine max HOM05D000976 ORTHO05D000847 4.7e-13 78.2 54 66.7
PGR102G3209 Punica granatum HOM05D000976 ORTHO05D000847 4.7e-13 78.2 45 73.3
Zm00001eb169680 Zea mays HOM05D000976 ORTHO05D000847 6.1e-13 77.8 49 63.3
FvH4_4g23860 Fragaria vesca HOM05D000976 ORTHO05D000847 8.0e-13 77.4 66 57.6
Phvul.001G261100 Phaseolus vulgaris HOM05D000976 ORTHO05D000847 8.0e-13 77.4 61 62.3
QL03p053535 Quercus lobata HOM05D000976 ORTHO05D000847 8.0e-13 77.4 103 46.6
MSTRG.2458 Avicennia marina HOM05D000976 ORTHO05D000847 1.4e-12 76.6 91 47.3
Cpa.g.sc43.46 Carica papaya HOM05D000976 ORTHO05D000847 1.4e-12 76.6 45 68.9
Dinv10965 Davidia involucrata HOM05D000976 ORTHO05D005109 1.8e-12 76.3 45 71.1
AUR62005611 Chenopodium quinoa HOM05D000976 ORTHO05D000847 2.3e-12 75.9 44 79.5
Os11g0483900 Oryza sativa ssp. japonica HOM05D000976 ORTHO05D000847 4.0e-12 75.1 45 66.7
Sabra08G0133700 Salix brachista HOM05D000976 ORTHO05D000847 4.0e-12 75.1 45 71.1
Sabra10G0045400 Salix brachista HOM05D000976 ORTHO05D038508 5.2e-12 74.7 39 82.1
HPP92_023199 Vanilla planifolia HOM05D000976 ORTHO05D000847 8.8e-12 73.9 67 47.8
CSS0006244 Camellia sinensis var. sinensis HOM05D000976 ORTHO05D000847 1.2e-11 73.6 55 60.0
THA.LOC104807881 Tarenaya hassleriana HOM05D000976 ORTHO05D000847 1.2e-11 73.6 53 66.0
FAN07G1201 Fragaria x ananassa HOM05D000976 ORTHO05D000847 1.5e-11 73.2 77 45.5
Ca_16466_v3 Cicer arietinum L. HOM05D000976 ORTHO05D000847 4.4e-11 71.6 44 68.2
Rhsim12G0026400 Rhododendron simsii HOM05D000976 ORTHO05D000847 4.4e-11 71.6 52 65.4
TPR.G28277 Trifolium pratense HOM05D000976 ORTHO05D000847 4.4e-11 71.6 52 65.4
Migut.E00020 Erythranthe guttata HOM05D000976 ORTHO05D000847 5.7e-11 71.2 45 71.1
Psat5g095360 Pisum sativum HOM05D000976 ORTHO05D000847 7.5e-11 70.9 51 60.8
ATR0561G113 Amborella trichopoda HOM05D000976 ORTHO05D000847 9.8e-11 70.5 44 63.6
HPP92_024539 Vanilla planifolia HOM05D000976 ORTHO05D000847 2.2e-10 69.3 65 52.3
vmacro01064 Vaccinium macrocarpon HOM05D000976 ORTHO05D000847 4.8e-10 68.2 52 63.5
ECA233G2244 Erigeron canadensis HOM05D000976 ORTHO05D000847 8.3e-10 67.4 45 64.4
Thhalv10018989m.g Eutrema salsugineum HOM05D000976 ORTHO05D000847 2.4e-09 65.9 63 55.6
CARHR059920 Cardamine hirsuta HOM05D000976 ORTHO05D000847 3.1e-09 65.5 53 56.6
AL2G25960 Arabidopsis lyrata HOM05D000976 ORTHO05D000847 7.0e-09 64.3 66 50.0
AT1G67400 Arabidopsis thaliana HOM05D000976 ORTHO05D000847 7.0e-09 64.3 66 50.0
Carub.0002s1373 Capsella rubella HOM05D000976 ORTHO05D000847 7.0e-09 64.3 66 48.5
DCAR_031199 Daucus carota HOM05D000976 ORTHO05D000847 9.1e-09 63.9 92 41.3
Lj3A1067G58 Lonicera japonica HOM05D000976 ORTHO05D000847 5.9e-08 61.2 59 52.5
Sp5g22330 Schrenkiella parvula HOM05D000976 ORTHO05D000847 5.9e-08 61.2 66 48.5
Aa31sc377G40 Aethionema arabicum HOM05D000976 ORTHO05D000847 2.9e-07 58.9 50 58.0
Oeu041667.1 Olea europaea HOM05D000976 ORTHO05D000847 2.9e-07 58.9 37 64.9
BcaB05g24282 Brassica carinata HOM05D000976 ORTHO05D000847 6.6e-07 57.8 56 55.4
BolC2t08444H Brassica oleracea HOM05D000976 ORTHO05D000847 2.5e-06 55.8 74 48.6
A02p14210 Brassica napus HOM05D000976 ORTHO05D000847 3.3e-06 55.5 83 43.4
BraA02t06483Z Brassica rapa HOM05D000976 ORTHO05D000847 3.3e-06 55.5 83 43.4
BcaC03g14839 Brassica carinata HOM05D000976 ORTHO05D000847 4.2e-06 55.1 74 50.0
C02p23000 Brassica napus HOM05D000976 ORTHO05D000847 4.2e-06 55.1 74 50.0


User provided reference genes

Program Settings