Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01533 Aquilegia oxysepala HOM05D000032 ORTHO05D077944 5.7e-40 167.2 86 100.0
Potri.007G021800 Populus trichocarpa HOM05D000032 ORTHO05D007443 3.6e-10 68.2 68 57.4
QL06p038783 Quercus lobata HOM05D000032 ORTHO05D007443 3.6e-10 68.2 68 55.9
Sabra07G0018900 Salix brachista HOM05D000032 ORTHO05D007443 3.6e-10 68.2 68 57.4
Nitab4.5_0001225g0240 Nicotiana tabacum HOM05D000032 ORTHO05D007443 4.7e-10 67.8 71 57.7
Nitab4.5_0010329g0010 Nicotiana tabacum HOM05D000032 ORTHO05D007443 8.0e-10 67.0 68 60.3
TAR381G1241 Trochodendron aralioides HOM05D000032 ORTHO05D007443 1.4e-09 66.2 70 58.6
CAN.G79.11 Capsicum annuum HOM05D000032 ORTHO05D007443 2.3e-09 65.5 68 58.8
Gorai.007G226800 Gossypium raimondii HOM05D000032 ORTHO05D007443 2.3e-09 65.5 69 56.5
MBI16_g35719_MAGBIO Magnolia biondii HOM05D000032 ORTHO05D007443 3.0e-09 65.1 69 52.2
Thecc.01G077000 Theobroma cacao HOM05D000032 ORTHO05D007443 6.8e-09 63.9 68 54.4
Gohir.D11G211100 Gossypium hirsutum HOM05D000032 ORTHO05D007443 1.5e-08 62.8 69 55.1
Solyc02g070100.3 Solanum lycopersicum HOM05D000032 ORTHO05D007443 1.5e-08 62.8 61 59.0
PGSC0003DMG400021177 Solanum tuberosum HOM05D000032 ORTHO05D007443 1.5e-08 62.8 64 59.4
Gohir.A11G211800 Gossypium hirsutum HOM05D000032 ORTHO05D007443 2.0e-08 62.4 69 55.1
CSS0045534 Camellia sinensis var. sinensis HOM05D000032 ORTHO05D007443 7.5e-08 60.5 70 51.4
GSVIVG01007277001 Vitis vinifera HOM05D000032 ORTHO05D007443 7.5e-08 60.5 53 58.5
Cfa006775 Carpinus fangiana HOM05D000032 ORTHO05D007443 1.7e-07 59.3 73 52.1
Sopen02g019260 Solanum pennellii HOM05D000032 ORTHO05D007443 3.7e-07 58.2 62 58.1
COL.COLO4_11621 Corchorus olitorius HOM05D000032 ORTHO05D007443 4.9e-07 57.8 50 58.0
CiPaw.08G149900 Carya illinoinensis HOM05D000032 ORTHO05D007443 6.3e-07 57.4 68 52.9
Actinidia36419 Actinidia chinensis HOM05D000032 ORTHO05D007443 8.3e-07 57.0 68 47.1
MSTRG.23651 Avicennia marina HOM05D000032 ORTHO05D007443 8.3e-07 57.0 61 52.5
Cc07_g07410 Coffea canephora HOM05D000032 ORTHO05D007443 8.3e-07 57.0 72 50.0
Haze_03984 Corylus avellana HOM05D000032 ORTHO05D007443 8.3e-07 57.0 71 47.9
Dinv23050 Davidia involucrata HOM05D000032 ORTHO05D007443 8.3e-07 57.0 68 48.5
Eucgr.H02337 Eucalyptus grandis HOM05D000032 ORTHO05D007443 8.3e-07 57.0 72 47.2
CANSAT64G0745 Cannabis sativa HOM05D000032 ORTHO05D007443 1.4e-06 56.2 67 46.3
Cpa.g.sc125.34 Carica papaya HOM05D000032 ORTHO05D007443 1.4e-06 56.2 69 49.3
Duzib147G1507 Durio zibethinus HOM05D000032 ORTHO05D007443 4.1e-06 54.7 67 49.3
Manes.13G108500 Manihot esculenta HOM05D000032 ORTHO05D007443 9.2e-06 53.5 72 47.2
Nn5g30290 Nelumbo nucifera HOM05D000032 ORTHO05D007443 9.2e-06 53.5 68 51.5


User provided reference genes

Program Settings