Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01524 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 7.5e-106 387.1 185 100.0
Aqoxy3G01085 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 2.2e-97 359.0 175 98.3
Aqoxy7G03118 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.7e-94 349.4 177 95.5
Manes.06G026700 Manihot esculenta HOM05D000306 ORTHO05D007657 1.8e-83 312.8 177 83.6
TAR383G0632 Trochodendron aralioides HOM05D000306 ORTHO05D007657 1.5e-82 309.7 176 83.0
vmacro13107 Vaccinium macrocarpon HOM05D000306 ORTHO05D007657 9.9e-82 307.0 180 83.3
Oeu042129.1 Olea europaea HOM05D000306 ORTHO05D007657 2.9e-81 305.4 175 82.9
Sc14g0001220 Simmondsia chinensis HOM05D000306 ORTHO05D007657 2.9e-81 305.4 173 85.5
Prupe.1G089400 Prunus persica HOM05D000306 ORTHO05D007657 4.9e-81 304.7 175 82.9
Actinidia17107 Actinidia chinensis HOM05D000306 ORTHO05D007657 6.4e-81 304.3 177 81.9
Cpa.g.sc95.65 Carica papaya HOM05D000306 ORTHO05D007657 6.4e-81 304.3 177 82.5
Thecc.09G168500 Theobroma cacao HOM05D000306 ORTHO05D007657 1.1e-80 303.5 175 82.3
Dinv42746 Davidia involucrata HOM05D000306 ORTHO05D007657 1.9e-80 302.8 177 82.5
Dinv43355 Davidia involucrata HOM05D000306 ORTHO05D007657 1.9e-80 302.8 177 82.5
Rhsim01G0007000 Rhododendron simsii HOM05D000306 ORTHO05D007657 2.4e-80 302.4 183 80.9
Hma1.2p1_3301F.1_g335020 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 4.2e-80 301.6 177 82.5
GSVIVG01029150001 Vitis vinifera HOM05D000306 ORTHO05D007657 4.2e-80 301.6 177 81.4
Nitab4.5_0000244g0290 Nicotiana tabacum HOM05D000306 ORTHO05D007657 5.4e-80 301.2 174 83.3
Nitab4.5_0000937g0030 Nicotiana tabacum HOM05D000306 ORTHO05D007657 5.4e-80 301.2 174 83.3
FvH4_4g09080 Fragaria vesca HOM05D000306 ORTHO05D007657 7.1e-80 300.8 175 82.9
Gohir.A05G005700 Gossypium hirsutum HOM05D000306 ORTHO05D007657 9.3e-80 300.4 173 82.7
Gohir.D05G006400 Gossypium hirsutum HOM05D000306 ORTHO05D007657 9.3e-80 300.4 173 82.7
CiPaw.07G190000 Carya illinoinensis HOM05D000306 ORTHO05D007657 1.2e-79 300.1 177 80.8
Hund00645 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.2e-79 300.1 180 80.0
THA.LOC104803506 Tarenaya hassleriana HOM05D000306 ORTHO05D007657 1.2e-79 300.1 177 80.8
Gorai.009G006500 Gossypium raimondii HOM05D000306 ORTHO05D007657 1.6e-79 299.7 173 82.1
Lj9A688T83 Lonicera japonica HOM05D000306 ORTHO05D007657 2.1e-79 299.3 175 80.0
CSS0004024 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 4.6e-79 298.1 177 81.9
Potri.018G095700 Populus trichocarpa HOM05D000306 ORTHO05D007657 6.0e-79 297.7 174 81.0
PSO063G6265 Papaver somniferum HOM05D000306 ORTHO05D007657 7.8e-79 297.4 177 80.2
Peaxi162Scf00050g00633 Petunia axillaris HOM05D000306 ORTHO05D007657 7.8e-79 297.4 173 80.3
QL02p097271 Quercus lobata HOM05D000306 ORTHO05D007657 1.0e-78 297.0 181 79.0
HanXRQChr03g0068931 Helianthus annuus HOM05D000306 ORTHO05D007657 1.3e-78 296.6 178 79.8
Migut.J01462 Erythranthe guttata HOM05D000306 ORTHO05D007657 1.7e-78 296.2 178 79.2
PGR142G2969 Punica granatum HOM05D000306 ORTHO05D007657 1.7e-78 296.2 175 81.1
PSO782G2546 Papaver somniferum HOM05D000306 ORTHO05D007657 2.3e-78 295.8 177 79.1
FAN22G1929 Fragaria x ananassa HOM05D000306 ORTHO05D007657 3.0e-78 295.4 179 81.0
ECA240G1428 Erigeron canadensis HOM05D000306 ORTHO05D005993 3.9e-78 295.0 177 79.7
FAN12G4153 Fragaria x ananassa HOM05D000306 ORTHO05D007657 3.9e-78 295.0 179 81.0
Cfa013520 Carpinus fangiana HOM05D000306 ORTHO05D007657 5.1e-78 294.7 181 78.5
CAN.G584.11 Capsicum annuum HOM05D000306 ORTHO05D007657 1.1e-77 293.5 174 81.6
FAN17G2452 Fragaria x ananassa HOM05D000306 ORTHO05D007657 2.5e-77 292.4 179 80.4
Haze_22120 Corylus avellana HOM05D000306 ORTHO05D007657 3.3e-77 292.0 179 79.3
Eucgr.C00188 Eucalyptus grandis HOM05D000306 ORTHO05D007657 3.3e-77 292.0 177 80.8
Nn2g12665 Nelumbo nucifera HOM05D000306 ORTHO05D007657 3.3e-77 292.0 175 78.3
Atru.chr7.723 Acer truncatum HOM05D000306 ORTHO05D007657 5.6e-77 291.2 177 80.8
AL7G21840 Arabidopsis lyrata HOM05D000306 ORTHO05D007657 9.6e-77 290.4 175 80.6
arahy.Tifrunner.gnm1.ann1.2QW3Q9 Arachis hypogaea HOM05D000306 ORTHO05D007657 9.6e-77 290.4 180 78.9
AT4G30310 Arabidopsis thaliana HOM05D000306 ORTHO05D007657 1.3e-76 290.0 175 80.6
Solyc07g006780.3 Solanum lycopersicum HOM05D000306 ORTHO05D007657 1.6e-76 289.7 174 80.5
Sopen07g002880 Solanum pennellii HOM05D000306 ORTHO05D007657 1.6e-76 289.7 174 80.5
ATR0580G308 Amborella trichopoda HOM05D000306 ORTHO05D007657 2.1e-76 289.3 178 77.5
VMungo1215G2115 Vigna mungo HOM05D000306 ORTHO05D007657 4.8e-76 288.1 175 79.4
Carub.0007s1029 Capsella rubella HOM05D000306 ORTHO05D007657 6.2e-76 287.7 173 79.2
ClCG11G012530 Citrullus lanatus HOM05D000306 ORTHO05D007657 6.2e-76 287.7 177 79.1
CDE04G1293 Ceratophyllum demersum HOM05D000306 ORTHO05D007657 1.4e-75 286.6 175 78.3
MD13G1267100 Malus domestica HOM05D000306 ORTHO05D007657 1.4e-75 286.6 175 80.6
Sed0007717 Sechium edule HOM05D000306 ORTHO05D007657 1.8e-75 286.2 173 79.8
CARHR238220 Cardamine hirsuta HOM05D000306 ORTHO05D007657 2.4e-75 285.8 175 78.9
Thhalv10024769m.g Eutrema salsugineum HOM05D000306 ORTHO05D007657 2.4e-75 285.8 175 79.4
PGSC0003DMG400018753 Solanum tuberosum HOM05D000306 ORTHO05D007657 3.1e-75 285.4 174 79.9
CsaV3_2G008000 Cucumis sativus L. HOM05D000306 ORTHO05D007657 5.3e-75 284.6 175 78.3
EL10Ac8g18267 Beta vulgaris HOM05D000306 ORTHO05D007657 9.0e-75 283.9 176 77.8
Sp7g28180 Schrenkiella parvula HOM05D000306 ORTHO05D007657 9.0e-75 283.9 175 78.9
Cc06_g13490 Coffea canephora HOM05D000306 ORTHO05D007657 9.9e-74 280.4 180 76.7
Sabra18G0081600 Salix brachista HOM05D000306 ORTHO05D007657 1.7e-73 279.6 201 69.7
Zm00001eb069070 Zea mays HOM05D000306 ORTHO05D007657 1.7e-73 279.6 177 75.7
BolC7t46241H Brassica oleracea HOM05D000306 ORTHO05D007657 2.2e-73 279.3 184 75.5
BraA03t15029Z Brassica rapa HOM05D000306 ORTHO05D007657 2.2e-73 279.3 184 75.5
Lsat_1_v5_gn_7_54281 Lactuca sativa HOM05D000306 ORTHO05D007657 2.2e-73 279.3 184 74.5
DCAR_020115 Daucus carota HOM05D000306 ORTHO05D007657 3.8e-73 278.5 175 75.4
C07p57810 Brassica napus HOM05D000306 ORTHO05D007657 6.4e-73 277.7 184 75.0
A03p59750 Brassica napus HOM05D000306 ORTHO05D007657 1.1e-72 276.9 183 75.4
RcHm_v2.0_Chr4g0405011 Rosa chinensis HOM05D000306 ORTHO05D007657 1.9e-72 276.2 179 76.5
Aqoxy1G02891 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 5.4e-72 274.6 148 91.9
SEGI_13713 Sequoiadendron giganteum HOM05D000306 ORTHO05D007657 2.1e-71 272.7 178 72.5
AUR62039995 Chenopodium quinoa HOM05D000306 ORTHO05D007657 2.3e-70 269.2 176 73.9
HPP92_013461 Vanilla planifolia HOM05D000306 ORTHO05D007657 5.6e-69 264.6 180 71.1
AUR62040301 Chenopodium quinoa HOM05D000306 ORTHO05D007657 9.6e-69 263.8 176 72.7
Psat4g012000 Pisum sativum HOM05D000306 ORTHO05D007657 2.1e-68 262.7 173 74.0
SGA_v2.0_scaffold69G23280 Striga asiatica HOM05D000306 ORTHO05D007657 2.1e-68 262.7 163 77.3
TWI34G1080 Tripterygium wilfordii HOM05D000306 ORTHO05D007657 6.2e-68 261.2 175 72.6
Medtr4g128640 Medicago truncatula HOM05D000306 ORTHO05D007657 1.1e-67 260.4 173 72.3
Lj4g0000904 Lotus japonicus HOM05D000306 ORTHO05D007657 3.4e-66 255.4 173 71.7
BcaNung00538 Brassica carinata HOM05D000306 ORTHO05D007657 7.6e-66 254.2 175 74.3
TPR.G5313 Trifolium pratense HOM05D000306 ORTHO05D007657 2.9e-65 252.3 175 70.3
Ca_21206_v3 Cicer arietinum L. HOM05D000306 ORTHO05D007657 4.9e-65 251.5 173 71.1
RcHm_v2.0_Chr4g0403081 Rosa chinensis HOM05D000306 ORTHO05D007657 4.9e-65 251.5 175 71.4
MBI16_g41815_MAGBIO Magnolia biondii HOM05D000306 ORTHO05D007657 1.1e-64 250.4 173 72.8
Glyma.17G065600 Glycine max HOM05D000306 ORTHO05D007657 2.4e-64 249.2 173 69.4
CANSAT11G0744 Cannabis sativa HOM05D000306 ORTHO05D007657 5.5e-64 248.1 177 69.5
Ciclev10007754m.g Citrus clementina HOM05D000306 ORTHO05D007657 5.5e-64 248.1 175 69.1
Os02g0177900 Oryza sativa ssp. japonica HOM05D000306 ORTHO05D007657 5.5e-64 248.1 152 79.6
Phvul.003G148000 Phaseolus vulgaris HOM05D000306 ORTHO05D007657 5.5e-64 248.1 175 68.6
Lalb_Chr07g0180291 Lupinus albus HOM05D000306 ORTHO05D007657 2.1e-63 246.1 173 69.4
Glyma.13G094600 Glycine max HOM05D000306 ORTHO05D007657 6.0e-63 244.6 173 68.2
Aa31LG2G20220 Aethionema arabicum HOM05D000306 ORTHO05D007657 1.0e-62 243.8 177 66.7
ECA240G0310 Erigeron canadensis HOM05D000306 ORTHO05D007657 3.0e-62 242.3 179 67.6
Hma1.2p1_1423F.1_g282590 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 1.3e-60 236.9 134 85.1
Pp3c23_15560 Physcomitrium patens HOM05D000306 ORTHO05D007657 8.1e-60 234.2 179 64.2
AagrBONN_evm.TU.Sc2ySwM_117.626 Anthoceros agrestis HOM05D000306 ORTHO05D007657 1.1e-59 233.8 244 50.8
Mapoly0003s0282 Marchantia polymorpha HOM05D000306 ORTHO05D007657 3.1e-59 232.3 184 60.3
Aqoxy1G03516 Aquilegia oxysepala HOM05D000306 ORTHO05D007657 1.6e-55 219.9 147 80.3
Duzib150G0020 Durio zibethinus HOM05D000306 ORTHO05D007657 2.5e-53 212.6 173 63.0
Nn8g40502 Nelumbo nucifera HOM05D000306 ORTHO05D007657 8.2e-52 207.6 120 80.8
SMO239G0169 Selaginella moellendorffii HOM05D000306 ORTHO05D007657 2.2e-49 199.5 176 59.7
Hma1.2p1_0342F.1_g130620 Hydrangea macrophylla HOM05D000306 ORTHO05D007657 3.7e-44 182.2 118 76.3
Hund00646 Selenicereus undatus HOM05D000306 ORTHO05D007657 1.4e-43 180.3 174 56.3
MELO3C000682.2 Cucumis melo HOM05D000306 ORTHO05D007657 1.5e-34 150.2 105 72.4
Haze_26997 Corylus avellana HOM05D000306 ORTHO05D007657 4.1e-27 125.6 159 42.1
Cfa026537 Carpinus fangiana HOM05D000306 ORTHO05D007657 1.1e-24 117.5 159 39.6
QL02p086401 Quercus lobata HOM05D000306 ORTHO05D007657 2.7e-23 112.8 82 70.7
SHI02941 Sapria himalayana HOM05D000306 ORTHO05D007657 2.6e-21 106.3 80 70.0
QL02p097096 Quercus lobata HOM05D000306 ORTHO05D007657 3.3e-21 105.9 82 67.1
QL02p097130 Quercus lobata HOM05D000306 ORTHO05D007657 7.2e-16 88.2 66 71.2
Nn2g14416 Nelumbo nucifera HOM05D000306 ORTHO05D007657 4.8e-12 75.5 39 82.1
CSS0008880 Camellia sinensis var. sinensis HOM05D000306 ORTHO05D007657 1.1e-11 74.3 41 80.5


User provided reference genes

Program Settings