Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 1.9e-56 222.2 110 100.0
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 4.3e-24 114.8 114 54.4
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 2.1e-23 112.5 107 53.3
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 4.0e-22 108.2 105 53.3
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 6.8e-22 107.5 110 54.5
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 9.9e-21 103.6 116 52.6
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 2.2e-20 102.4 105 54.3
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 4.9e-20 101.3 112 50.9
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 1.2e-18 96.7 106 50.0
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.6e-18 96.3 106 52.8
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 3.5e-18 95.1 106 51.9
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 3.5e-18 95.1 112 51.8
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 4.6e-18 94.7 105 49.5
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 6.0e-18 94.4 108 48.1
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 7.8e-18 94.0 107 44.9
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 1.0e-17 93.6 106 48.1
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 1.0e-17 93.6 105 45.7
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 1.7e-17 92.8 112 46.4
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 3.0e-17 92.0 109 54.1
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 5.1e-17 91.3 124 44.4
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 8.7e-17 90.5 97 50.5
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 1.9e-16 89.4 105 43.8
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 2.5e-16 89.0 110 47.3
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 5.6e-16 87.8 97 52.6
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 5.6e-16 87.8 101 50.5
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 7.3e-16 87.4 96 44.8
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 1.2e-15 86.7 113 52.2
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.6e-15 86.3 96 44.8
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 2.1e-15 85.9 124 41.9
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 2.1e-15 85.9 96 44.8
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 2.8e-15 85.5 110 42.7
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 3.6e-15 85.1 108 44.4
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 2.4e-14 82.4 119 43.7
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 2.4e-14 82.4 114 45.6
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 4.0e-14 81.6 112 42.0
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 9.0e-14 80.5 96 46.9
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.5e-13 79.7 94 50.0
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 2.0e-13 79.3 91 49.5
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 2.6e-13 79.0 134 39.6
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 2.6e-13 79.0 93 50.5
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 3.4e-13 78.6 87 48.3
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 5.8e-13 77.8 88 46.6
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 7.6e-13 77.4 128 41.4
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 2.9e-12 75.5 108 43.5
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 3.8e-12 75.1 99 41.4
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 6.4e-12 74.3 113 38.9
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 6.4e-12 74.3 97 39.2
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 1.1e-11 73.6 102 45.1
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 3.2e-11 72.0 112 42.0
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 5.4e-11 71.2 103 45.6
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 5.1e-09 64.7 96 34.4
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 1.5e-08 63.2 93 41.9
Sabra08G0134300 Salix brachista HOM05D008446 ORTHO05D010616 8.1e-07 57.4 77 46.8


User provided reference genes

Program Settings