Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01489 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 5.9e-121 437.6 223 100.0
TAR622G0135 Trochodendron aralioides HOM05D007857 ORTHO05D009355 1.7e-27 127.1 214 39.3
TAR374G0584 Trochodendron aralioides HOM05D007857 ORTHO05D009355 3.8e-27 125.9 126 51.6
Dinv10979 Davidia involucrata HOM05D007857 ORTHO05D009355 2.1e-25 120.2 211 37.0
Dinv14814 Davidia involucrata HOM05D007857 ORTHO05D009355 7.9e-25 118.2 278 33.5
Haze_12382 Corylus avellana HOM05D007857 ORTHO05D009355 2.5e-23 113.2 230 32.6
Cfa009341 Carpinus fangiana HOM05D007857 ORTHO05D009355 2.8e-22 109.8 147 39.5
Nn4g22377 Nelumbo nucifera HOM05D007857 ORTHO05D009355 3.6e-22 109.4 147 44.9
PSO063G0898 Papaver somniferum HOM05D007857 ORTHO05D009355 9.9e-20 101.3 204 32.8
Rhsim12G0103100 Rhododendron simsii HOM05D007857 ORTHO05D009355 3.8e-19 99.4 115 44.3
Hma1.2p1_1239F.1_g269420 Hydrangea macrophylla HOM05D007857 ORTHO05D009355 4.9e-19 99.0 116 48.3
QL03p054319 Quercus lobata HOM05D007857 ORTHO05D009355 3.2e-18 96.3 116 44.8
TWI75G0924 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.2e-18 95.9 140 38.6
PSO357G0688 Papaver somniferum HOM05D007857 ORTHO05D009355 5.5e-18 95.5 207 33.8
RcHm_v2.0_Chr4g0430861 Rosa chinensis HOM05D007857 ORTHO05D009355 5.5e-18 95.5 136 39.7
CSS0005757 Camellia sinensis var. sinensis HOM05D007857 ORTHO05D009355 1.6e-17 94.0 186 33.9
MBI11_g31349_MAGBIO Magnolia biondii HOM05D007857 ORTHO05D009355 2.1e-17 93.6 97 45.4
Ciclev10033758m.g Citrus clementina HOM05D007857 ORTHO05D009355 3.5e-17 92.8 116 42.2
PSO782G1056 Papaver somniferum HOM05D007857 ORTHO05D009355 3.5e-17 92.8 106 43.4
Sc04g0010010 Simmondsia chinensis HOM05D007857 ORTHO05D009355 4.6e-17 92.4 116 41.4
Manes.13G017400 Manihot esculenta HOM05D007857 ORTHO05D009355 1.0e-16 91.3 115 43.5
ClCG08G017230 Citrullus lanatus HOM05D007857 ORTHO05D009355 3.0e-16 89.7 111 39.6
CiPaw.06G100500 Carya illinoinensis HOM05D007857 ORTHO05D009355 3.9e-16 89.4 110 45.5
Prupe.1G231500 Prunus persica HOM05D007857 ORTHO05D009355 5.1e-16 89.0 132 39.4
MELO3C010736.2 Cucumis melo HOM05D007857 ORTHO05D009355 6.7e-16 88.6 113 39.8
Thecc.02G276200 Theobroma cacao HOM05D007857 ORTHO05D009355 6.7e-16 88.6 117 43.6
Atru.chr11.2290 Acer truncatum HOM05D007857 ORTHO05D009355 8.7e-16 88.2 108 45.4
Actinidia20693 Actinidia chinensis HOM05D007857 ORTHO05D009355 1.1e-15 87.8 128 40.6
FvH4_4g24090 Fragaria vesca HOM05D007857 ORTHO05D009355 1.5e-15 87.4 137 35.8
Sabra10G0047600 Salix brachista HOM05D007857 ORTHO05D009355 1.5e-15 87.4 121 41.3
Ca_18058_v3 Cicer arietinum L. HOM05D007857 ORTHO05D009355 2.5e-15 86.7 149 32.2
CsaV3_2G025390 Cucumis sativus L. HOM05D007857 ORTHO05D009355 2.5e-15 86.7 120 38.3
Aqoxy5G03443 Aquilegia oxysepala HOM05D007857 ORTHO05D009355 3.3e-15 86.3 133 35.3
Gohir.D02G151200 Gossypium hirsutum HOM05D007857 ORTHO05D009355 3.3e-15 86.3 118 39.0
Gorai.005G169600 Gossypium raimondii HOM05D007857 ORTHO05D009355 3.3e-15 86.3 118 39.0
Gohir.A03G127600 Gossypium hirsutum HOM05D007857 ORTHO05D009355 4.3e-15 85.9 118 39.0
Potri.008G177300 Populus trichocarpa HOM05D007857 ORTHO05D009355 4.3e-15 85.9 120 38.3
FAN12G2990 Fragaria x ananassa HOM05D007857 ORTHO05D009355 7.4e-15 85.1 137 35.8
CANSAT01G1499 Cannabis sativa HOM05D007857 ORTHO05D009355 1.3e-14 84.3 115 40.0
FAN07G0728 Fragaria x ananassa HOM05D007857 ORTHO05D009355 2.1e-14 83.6 135 34.8
TWI36G0032 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.8e-14 82.4 204 31.9
TWI36G1497 Tripterygium wilfordii HOM05D007857 ORTHO05D009355 4.8e-14 82.4 204 31.9
Lj4g0021592 Lotus japonicus HOM05D007857 ORTHO05D009355 8.1e-14 81.6 116 37.9
Sed0017756 Sechium edule HOM05D007857 ORTHO05D009355 8.1e-14 81.6 110 39.1
SGA_v2.0_scaffold9G04766 Striga asiatica HOM05D007857 ORTHO05D009355 8.1e-14 81.6 109 43.1
Potri.010G057800 Populus trichocarpa HOM05D007857 ORTHO05D009355 1.1e-13 81.3 121 38.8
MD16G1115600 Malus domestica HOM05D007857 ORTHO05D009355 1.8e-13 80.5 107 41.1
Oeu020304.1 Olea europaea HOM05D001334 ORTHO05D001119 3.1e-13 79.7 127 37.8
TPR.G17074 Trifolium pratense HOM05D007857 ORTHO05D009355 3.1e-13 79.7 136 34.6
MD13G1115600 Malus domestica HOM05D007857 ORTHO05D009355 5.3e-13 79.0 111 37.8
Medtr8g080270 Medicago truncatula HOM05D007857 ORTHO05D009355 6.9e-13 78.6 127 34.6
Psat7g078480 Pisum sativum HOM05D007857 ORTHO05D009355 1.2e-12 77.8 227 29.1
arahy.Tifrunner.gnm1.ann1.32T9N9 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-12 77.0 227 27.8
arahy.Tifrunner.gnm1.ann1.ZB6N55 Arachis hypogaea HOM05D007857 ORTHO05D009355 2.0e-12 77.0 227 27.8
VMungo0251G2942 Vigna mungo HOM05D007857 ORTHO05D009355 2.6e-12 76.6 116 35.3
Glyma.03G186400 Glycine max HOM05D007857 ORTHO05D009355 5.8e-12 75.5 117 35.9
Glyma.19G186500 Glycine max HOM05D007857 ORTHO05D009355 5.8e-12 75.5 117 35.9
arahy.Tifrunner.gnm1.ann1.AFM6H1 Arachis hypogaea HOM05D007857 ORTHO05D009355 7.6e-12 75.1 227 27.3
COL.COLO4_20347 Corchorus olitorius HOM05D007857 ORTHO05D009355 7.6e-12 75.1 255 28.2
Lalb_Chr07g0187361 Lupinus albus HOM05D007857 ORTHO05D009355 1.3e-11 74.3 107 37.4
Glyma.05G146200 Glycine max HOM05D007857 ORTHO05D009355 1.7e-11 73.9 116 34.5
Sed0006532 Sechium edule HOM05D007857 ORTHO05D009355 6.5e-11 72.0 159 30.2
SalBow2G3021 Salvia bowleyana HOM05D007857 ORTHO05D009355 1.4e-10 70.9 126 37.3
C06p42700 Brassica napus HOM05D010720 ORTHO05D009355 2.5e-10 70.1 112 35.7
BolC6t39169H Brassica oleracea HOM05D010720 ORTHO05D009355 2.5e-10 70.1 112 35.7
BraA07t31035Z Brassica rapa HOM05D010720 ORTHO05D009355 2.5e-10 70.1 112 34.8
Phvul.002G175100 Phaseolus vulgaris HOM05D007857 ORTHO05D009355 2.5e-10 70.1 117 33.3
BcaB05g24293 Brassica carinata HOM05D010720 ORTHO05D009355 4.2e-10 69.3 224 28.6
BcaNung05070 Brassica carinata HOM05D010720 ORTHO05D009355 4.2e-10 69.3 112 35.7
A07p34090 Brassica napus HOM05D010720 ORTHO05D009355 7.1e-10 68.6 112 34.8
PGR119G0189 Punica granatum HOM05D007857 ORTHO05D009355 9.3e-10 68.2 126 32.5
BcaC03g14845 Brassica carinata HOM05D010720 ORTHO05D009355 1.2e-09 67.8 218 26.1
BolC2t08453H Brassica oleracea HOM05D010720 ORTHO05D009355 1.2e-09 67.8 220 27.3
C02p23110 Brassica napus HOM05D010720 ORTHO05D009355 1.6e-09 67.4 218 26.1
BcaB03g15187 Brassica carinata HOM05D010720 ORTHO05D009355 2.1e-09 67.0 112 33.9
Solyc04g045390.1 Solanum lycopersicum HOM05D007857 ORTHO05D009355 2.1e-09 67.0 116 36.2
DCAR_031188 Daucus carota HOM05D007857 ORTHO05D009355 4.6e-09 65.9 119 31.1
A02p14300 Brassica napus HOM05D010720 ORTHO05D009355 6.0e-09 65.5 218 25.2
BraA02t06491Z Brassica rapa HOM05D010720 ORTHO05D009355 6.0e-09 65.5 218 25.2
Cpa.g.sc43.26 Carica papaya HOM05D007857 ORTHO05D009355 1.0e-08 64.7 146 30.8
THA.LOC104807888 Tarenaya hassleriana HOM05D010720 ORTHO05D009355 3.9e-08 62.8 218 28.0
Aa31sc48G30 Aethionema arabicum HOM05D010720 ORTHO05D009355 5.1e-08 62.4 220 26.4
CARHR060110 Cardamine hirsuta HOM05D010720 ORTHO05D009355 5.1e-08 62.4 115 36.5
Os04g0504700 Oryza sativa ssp. japonica HOM05D007857 ORTHO05D009355 6.7e-08 62.0 104 29.8
Eucgr.H04657 Eucalyptus grandis HOM05D007857 ORTHO05D009355 8.7e-08 61.6 85 31.8
Migut.K00709 Erythranthe guttata HOM05D007857 ORTHO05D009355 1.5e-07 60.8 183 25.7
Sabra08G0135300 Salix brachista HOM05D007857 ORTHO05D009355 1.5e-07 60.8 123 33.3
Lsat_1_v5_gn_8_149921 Lactuca sativa HOM05D007857 ORTHO05D009355 1.9e-07 60.5 173 27.7
Cc11_g16750 Coffea canephora HOM05D007857 ORTHO05D009355 5.7e-07 58.9 65 44.6
ATR0686G174 Amborella trichopoda HOM05D007857 ORTHO05D009355 1.3e-06 57.8 65 40.0
ECA233G3449 Erigeron canadensis HOM05D007857 ORTHO05D009355 1.3e-06 57.8 182 25.8
AL2G26210 Arabidopsis lyrata HOM05D010720 ORTHO05D009355 2.1e-06 57.0 121 33.1


User provided reference genes

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