Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 6.9e-284 979.9 487 100.0
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 1.7e-266 922.2 487 92.6
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.7e-266 922.2 486 92.6
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 1.1e-265 919.5 484 91.9
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 5.5e-265 917.1 487 91.4
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 5.5e-265 917.1 487 91.6
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 9.4e-265 916.4 487 91.4
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 9.4e-265 916.4 487 91.8
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 1.2e-264 916.0 485 91.5
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-264 916.0 486 91.8
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 1.2e-264 916.0 487 89.9
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 2.1e-264 915.2 487 91.0
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 2.1e-264 915.2 487 91.8
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.1e-264 915.2 486 91.8
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.7e-264 914.8 487 90.1
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 3.6e-264 914.4 487 91.2
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.6e-264 914.4 484 91.9
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.7e-264 914.1 487 91.2
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 1.0e-263 912.9 487 92.4
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.4e-263 912.5 487 91.2
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 1.4e-263 912.5 487 90.3
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 1.8e-263 912.1 487 92.2
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 2.3e-263 911.8 487 92.2
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 6.7e-263 910.2 487 92.0
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 6.7e-263 910.2 483 91.5
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 6.7e-263 910.2 487 90.3
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 6.7e-263 910.2 487 91.6
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 8.8e-263 909.8 487 92.0
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 1.1e-262 909.4 487 91.8
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.5e-262 909.1 483 89.6
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 2.0e-262 908.7 487 92.0
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 2.6e-262 908.3 484 92.4
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 2.6e-262 908.3 487 90.6
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 2.6e-262 908.3 487 91.4
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 3.3e-262 907.9 484 92.4
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 3.3e-262 907.9 486 91.4
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 5.7e-262 907.1 484 90.9
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 5.7e-262 907.1 487 91.6
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 9.7e-262 906.4 489 91.6
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 9.7e-262 906.4 487 89.9
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 1.3e-261 906.0 487 90.6
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.3e-261 906.0 486 91.2
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 1.7e-261 905.6 484 91.1
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 2.2e-261 905.2 487 92.0
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 2.2e-261 905.2 486 89.7
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 2.2e-261 905.2 484 90.9
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 2.2e-261 905.2 487 91.4
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.8e-261 904.8 484 90.5
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 2.8e-261 904.8 486 92.0
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 2.8e-261 904.8 487 91.4
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 2.8e-261 904.8 487 91.6
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 3.7e-261 904.4 484 92.1
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 3.7e-261 904.4 484 90.7
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 4.8e-261 904.0 483 90.1
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 4.8e-261 904.0 487 91.8
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 4.8e-261 904.0 484 90.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 6.3e-261 903.7 484 90.1
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 8.2e-261 903.3 484 90.5
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 1.4e-260 902.5 487 91.6
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 1.4e-260 902.5 487 89.9
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.8e-260 902.1 488 90.4
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 89.5
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 1.8e-260 902.1 487 91.0
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 2.4e-260 901.7 486 90.5
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 90.9
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 90.3
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 90.3
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 4.1e-260 901.0 487 89.7
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 5.3e-260 900.6 480 91.0
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 5.3e-260 900.6 487 89.5
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 7.0e-260 900.2 483 90.5
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 7.0e-260 900.2 484 90.3
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 9.1e-260 899.8 492 89.2
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 9.1e-260 899.8 486 90.3
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 1.2e-259 899.4 484 90.9
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 1.6e-259 899.0 486 91.2
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 3.5e-259 897.9 487 89.9
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 3.5e-259 897.9 487 89.5
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 3.5e-259 897.9 480 90.6
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 3.5e-259 897.9 483 91.1
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 5.9e-259 897.1 484 89.9
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 7.7e-259 896.7 487 89.3
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 7.7e-259 896.7 483 90.9
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.0e-258 896.3 487 89.7
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 1.3e-258 896.0 485 91.5
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 1.7e-258 895.6 483 90.1
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.2e-258 895.2 487 88.7
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 2.9e-258 894.8 484 89.5
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 8.5e-258 893.3 481 90.0
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 1.1e-257 892.9 483 89.6
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 1.5e-257 892.5 493 90.3
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 1.9e-257 892.1 460 94.8
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 1.9e-257 892.1 482 90.2
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 3.2e-257 891.3 485 90.1
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 3.2e-257 891.3 488 90.8
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 5.5e-257 890.6 484 90.3
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 9.4e-257 889.8 482 90.5
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 9.4e-257 889.8 480 90.0
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 1.2e-256 889.4 484 89.0
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 2.1e-256 888.6 486 90.5
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.4e-255 885.9 474 90.5
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 3.0e-255 884.8 460 94.1
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 4.0e-255 884.4 460 94.1
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 1.5e-254 882.5 485 89.7
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 3.7e-253 877.9 437 94.3
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 1.1e-252 876.3 479 89.1
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 9.1e-252 873.2 484 88.8
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.6e-248 862.4 460 91.5
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.5e-246 853.6 430 93.3
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.3e-245 852.8 436 91.7
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 3.7e-245 851.3 498 85.7
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 5.4e-244 847.4 436 91.7
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 9.1e-244 846.7 436 90.8
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 5.9e-243 844.0 480 83.1
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 2.3e-239 832.0 434 89.4
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 1.2e-238 829.7 431 88.9
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.1e-236 821.6 408 94.4
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 4.5e-235 817.8 406 94.6
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 5.9e-235 817.4 407 93.9
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.7e-234 815.8 405 94.6
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 7.3e-233 810.4 407 93.4
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 6.8e-231 803.9 433 86.6
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 3.6e-224 781.6 486 79.2
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 7.5e-222 773.9 384 95.1
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 4.6e-219 764.6 436 81.7
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 7.8e-219 763.8 421 82.9
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.0e-218 763.5 427 82.4
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 1.5e-206 723.0 392 88.5
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 4.4e-206 721.5 481 77.3
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 7.3e-201 704.1 393 87.3
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.5e-190 669.8 366 90.2
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.7e-189 666.4 346 91.6
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 1.7e-186 656.4 395 75.9
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.1e-179 632.9 486 69.8
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 1.9e-177 626.3 315 93.3
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 7.9e-171 604.4 487 67.6
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-169 600.5 486 67.1
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 8.2e-168 594.3 486 67.1
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 9.3e-164 580.9 331 87.9
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.6e-147 525.8 279 88.9
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 5.0e-141 505.4 351 72.4
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 3.5e-126 456.1 275 76.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.5e-113 414.1 203 96.1
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 7.8e-102 375.2 177 98.9
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 6.4e-96 355.5 191 87.4
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 1.2e-94 351.3 172 96.5
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 7.3e-92 342.0 171 94.2
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 9.9e-81 305.1 483 41.6
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 1.6e-75 287.7 146 91.8
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 3.7e-67 260.0 146 84.9
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 8.1e-67 258.8 164 82.9
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 7.6e-65 252.3 127 94.5
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 1.4e-63 248.1 127 88.2
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.0e-56 225.3 147 83.0
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 3.0e-53 213.8 254 44.5
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 1.8e-50 204.5 100 94.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 2.6e-49 200.7 102 93.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.7e-46 190.7 127 78.7
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 9.7e-36 155.6 102 76.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 4.8e-35 153.3 77 93.5
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 4.8e-35 153.3 77 93.5
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 8.5e-32 142.5 108 65.7
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 5.2e-29 133.3 69 92.8
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 5.2e-29 133.3 197 38.1
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.5e-28 131.7 71 87.3
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.8e-27 126.7 65 92.3
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 4.8e-27 126.7 65 92.3
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 6.3e-27 126.3 68 85.3
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.6e-25 120.9 66 84.8
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 5.9e-25 119.8 66 83.3
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.4e-21 108.6 65 80.0
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 6.7e-21 106.3 67 70.1
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 9.7e-20 102.4 47 95.7
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 7.7e-17 92.8 48 89.6
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 6.1e-14 83.2 168 33.9
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 4.0e-13 80.5 71 56.3
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 1.2e-12 79.0 72 56.9
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 2.6e-12 77.8 72 56.9
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 1.6e-09 68.6 61 57.4


User provided reference genes

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