Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01457 Aquilegia oxysepala HOM05D005075 ORTHO05D007097 0.0e+00 1424.1 716 100.0
MD13G1113200 Malus domestica HOM05D005075 ORTHO05D007097 6.1e-297 1023.8 712 71.5
Prupe.1G232900 Prunus persica HOM05D005075 ORTHO05D007097 2.3e-296 1021.9 712 71.9
Nn4g22400 Nelumbo nucifera HOM05D005075 ORTHO05D007097 1.2e-292 1009.6 717 71.0
Haze_12371 Corylus avellana HOM05D005075 ORTHO05D007097 4.3e-290 1001.1 680 71.8
GSVIVG01010340001 Vitis vinifera HOM05D005075 ORTHO05D007097 1.6e-289 999.2 671 73.0
TWI18G0401 Tripterygium wilfordii HOM05D005075 ORTHO05D007097 2.8e-289 998.4 682 71.8
QL03p054705 Quercus lobata HOM05D005075 ORTHO05D007097 5.2e-288 994.2 668 71.7
FvH4_4g24220 Fragaria vesca HOM05D005075 ORTHO05D007097 6.8e-288 993.8 681 70.9
FAN07G0914 Fragaria x ananassa HOM05D005075 ORTHO05D007097 6.8e-288 993.8 706 69.5
CSS0028948 Camellia sinensis var. sinensis HOM05D005075 ORTHO05D007097 5.8e-287 990.7 682 72.1
MBI08_g36442_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 3.7e-286 988.0 696 72.3
CANSAT01G2132 Cannabis sativa HOM05D005075 ORTHO05D007097 2.4e-285 985.3 679 70.8
COL.COLO4_23627 Corchorus olitorius HOM05D005075 ORTHO05D007097 7.8e-284 980.3 695 69.6
Hma1.2p1_0167F.1_g073740 Hydrangea macrophylla HOM05D005075 ORTHO05D007097 5.6e-282 974.2 709 69.1
RcHm_v2.0_Chr4g0431061 Rosa chinensis HOM05D005075 ORTHO05D007097 1.2e-281 973.0 713 68.7
Lj3A1065G86 Lonicera japonica HOM05D005075 ORTHO05D007097 5.2e-280 967.6 711 68.1
PSO782G5362 Papaver somniferum HOM05D005075 ORTHO05D007097 8.9e-280 966.8 666 72.4
FAN12G0151 Fragaria x ananassa HOM05D005075 ORTHO05D007097 2.0e-279 965.7 744 64.9
Thecc.02G274600 Theobroma cacao HOM05D005075 ORTHO05D007097 3.4e-279 964.9 669 70.6
Ciclev10030830m.g Citrus clementina HOM05D005075 ORTHO05D007097 8.3e-278 960.3 667 70.6
Cc11_g16630 Coffea canephora HOM05D005075 ORTHO05D007097 7.8e-276 953.7 709 64.3
Cpa.g.sc27.216 Carica papaya HOM05D005075 ORTHO05D007097 1.1e-274 949.9 672 69.5
Gorai.005G171200 Gossypium raimondii HOM05D005075 ORTHO05D007097 9.5e-274 946.8 668 69.3
DCAR_024086 Daucus carota HOM05D005075 ORTHO05D007097 8.1e-273 943.7 680 68.1
Gohir.A03G128400 Gossypium hirsutum HOM05D005075 ORTHO05D007097 3.1e-272 941.8 667 69.3
Glyma.11G248400 Glycine max HOM05D005075 ORTHO05D007097 3.4e-271 938.3 675 67.9
Rhsim12G0029800 Rhododendron simsii HOM05D005075 ORTHO05D007097 7.6e-271 937.2 701 66.3
PGSC0003DMG400022618 Solanum tuberosum HOM05D005075 ORTHO05D007097 6.4e-270 934.1 665 68.3
THA.LOC104799053 Tarenaya hassleriana HOM05D005075 ORTHO05D007097 6.4e-270 934.1 714 66.2
Sabra08G0136200 Salix brachista HOM05D005075 ORTHO05D007097 1.9e-269 932.6 704 67.0
CsaV3_5G015350 Cucumis sativus L. HOM05D005075 ORTHO05D007097 2.4e-269 932.2 712 64.7
arahy.Tifrunner.gnm1.ann1.S726NC Arachis hypogaea HOM05D005075 ORTHO05D007097 4.1e-269 931.4 676 67.8
Phvul.001G259800 Phaseolus vulgaris HOM05D005075 ORTHO05D007097 5.4e-269 931.0 665 67.7
Lalb_Chr23g0277981 Lupinus albus HOM05D005075 ORTHO05D007097 2.1e-268 929.1 664 67.5
Solyc05g006810.4 Solanum lycopersicum HOM05D005075 ORTHO05D007097 3.5e-268 928.3 671 67.8
CARHR026760 Cardamine hirsuta HOM05D005075 ORTHO05D007097 1.3e-267 926.4 714 64.8
Carub.0001s2573 Capsella rubella HOM05D005075 ORTHO05D007097 1.7e-267 926.0 714 65.0
BcaC06g35258 Brassica carinata HOM05D005075 ORTHO05D007097 3.0e-267 925.2 714 64.7
VMungo1383G1024 Vigna mungo HOM05D005075 ORTHO05D007097 6.6e-267 924.1 664 67.2
AT1G24340 Arabidopsis thaliana HOM05D005075 ORTHO05D007097 8.6e-267 923.7 714 65.4
A07p12060 Brassica napus HOM05D005075 ORTHO05D007097 1.5e-266 922.9 714 65.0
BraA07t28994Z Brassica rapa HOM05D005075 ORTHO05D007097 1.5e-266 922.9 711 64.8
MELO3C018283.2 Cucumis melo HOM05D005075 ORTHO05D007097 1.5e-266 922.9 676 66.4
Dinv14804 Davidia involucrata HOM05D005075 ORTHO05D007097 1.9e-266 922.5 714 66.0
Thhalv10006951m.g Eutrema salsugineum HOM05D005075 ORTHO05D007097 1.9e-266 922.5 714 64.6
Eucgr.H04663 Eucalyptus grandis HOM05D005075 ORTHO05D007097 3.3e-266 921.8 664 67.0
Lj3g0026022 Lotus japonicus HOM05D005075 ORTHO05D007097 7.3e-266 920.6 665 66.6
Ca_16480_v3 Cicer arietinum L. HOM05D005075 ORTHO05D007097 9.6e-266 920.2 677 66.0
BolC7t42310H Brassica oleracea HOM05D005075 ORTHO05D007097 1.2e-265 919.8 714 64.4
HanXRQChr08g0233581 Helianthus annuus HOM05D005075 ORTHO05D007097 1.2e-265 919.8 708 64.5
C07p18000 Brassica napus HOM05D005075 ORTHO05D007097 2.1e-265 919.1 714 64.3
ClCG06G008480 Citrullus lanatus HOM05D005075 ORTHO05D007097 4.7e-265 917.9 661 67.0
PGR119G0347 Punica granatum HOM05D005075 ORTHO05D007097 4.7e-265 917.9 698 64.8
Migut.K00700 Erythranthe guttata HOM05D005075 ORTHO05D007097 8.1e-265 917.1 705 63.3
Aa31LG7G9750 Aethionema arabicum HOM05D005075 ORTHO05D007097 1.4e-264 916.4 662 67.8
ECA233G3670 Erigeron canadensis HOM05D005075 ORTHO05D007097 1.4e-264 916.4 653 67.7
AL6G39900 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.8e-264 916.0 699 65.2
Nitab4.5_0002129g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 1.2e-263 913.3 665 67.5
Psat5g094520 Pisum sativum HOM05D005075 ORTHO05D007097 1.2e-263 913.3 664 67.2
AL1G40580 Arabidopsis lyrata HOM05D005075 ORTHO05D007097 1.5e-263 912.9 714 64.4
Sp1g23430 Schrenkiella parvula HOM05D005075 ORTHO05D007097 1.7e-262 909.4 716 63.4
Oeu056679.1 Olea europaea HOM05D005075 ORTHO05D007097 3.8e-262 908.3 710 62.7
Carub.0007s3241 Capsella rubella HOM05D005075 ORTHO05D007097 6.4e-262 907.5 714 63.9
vmacro01083 Vaccinium macrocarpon HOM05D005075 ORTHO05D007097 9.3e-261 903.7 722 63.0
arahy.Tifrunner.gnm1.ann1.I0S54J Arachis hypogaea HOM05D005075 ORTHO05D007097 2.1e-260 902.5 676 66.1
Medtr3g085660 Medicago truncatula HOM05D005075 ORTHO05D007097 2.7e-260 902.1 698 64.2
Nitab4.5_0000537g0120 Nicotiana tabacum HOM05D005075 ORTHO05D007097 7.8e-260 900.6 730 62.7
SalBow1G4350 Salvia bowleyana HOM05D005075 ORTHO05D007097 1.3e-259 899.8 706 63.7
SalBow1G5463 Salvia bowleyana HOM05D005075 ORTHO05D007097 2.3e-259 899.0 706 63.7
Sed0000829 Sechium edule HOM05D005075 ORTHO05D007097 2.3e-259 899.0 672 65.6
TPR.G22444 Trifolium pratense HOM05D005075 ORTHO05D007097 3.0e-259 898.7 670 66.1
Potri.008G178400 Populus trichocarpa HOM05D005075 ORTHO05D007097 2.1e-252 875.9 616 70.8
Hund25442 Selenicereus undatus HOM05D005075 ORTHO05D007097 4.3e-250 868.2 648 67.4
Peaxi162Scf00804g00120 Petunia axillaris HOM05D005075 ORTHO05D007097 5.6e-250 867.8 690 62.9
EL10Ac6g13442 Beta vulgaris HOM05D005075 ORTHO05D007097 7.3e-250 867.5 693 64.2
Nitab4.5_0001802g0060 Nicotiana tabacum HOM05D005075 ORTHO05D007097 2.1e-249 865.9 701 62.1
Zm00001eb014870 Zea mays HOM05D005075 ORTHO05D007097 5.3e-248 861.3 672 61.9
ATR0824G188 Amborella trichopoda HOM05D005075 ORTHO05D007097 1.7e-246 856.3 719 60.6
SGA_v2.0_scaffold14G07137 Striga asiatica HOM05D005075 ORTHO05D007097 1.2e-244 850.1 681 60.9
PSO063G5600 Papaver somniferum HOM05D005075 ORTHO05D007097 7.9e-244 847.4 616 69.6
AUR62005575 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.9e-238 828.9 709 61.9
Manes.13G016100 Manihot esculenta HOM05D005075 ORTHO05D007097 1.4e-237 826.6 667 63.0
Peaxi162Scf00634g00011 Petunia axillaris HOM05D005075 ORTHO05D007097 1.6e-228 796.6 699 58.9
TAR374G0458 Trochodendron aralioides HOM05D005075 ORTHO05D007097 1.8e-227 793.1 527 74.6
CDE02G1220 Ceratophyllum demersum HOM05D005075 ORTHO05D007097 1.9e-226 789.6 712 57.9
Sc11g0000650 Simmondsia chinensis HOM05D005075 ORTHO05D007097 4.8e-225 785.0 579 67.5
Lsat_1_v5_gn_8_149841 Lactuca sativa HOM05D005075 ORTHO05D007097 1.0e-222 777.3 1003 45.0
Sopen05g002750 Solanum pennellii HOM05D005075 ORTHO05D007097 1.9e-221 773.1 570 66.3
Cfa009316 Carpinus fangiana HOM05D005075 ORTHO05D007097 5.1e-219 765.0 489 76.1
AUR62024155 Chenopodium quinoa HOM05D005075 ORTHO05D007097 2.5e-218 762.7 633 63.0
Duzib251G0605 Durio zibethinus HOM05D005075 ORTHO05D007097 6.5e-214 748.0 694 57.2
Gohir.D02G152200 Gossypium hirsutum HOM05D005075 ORTHO05D007097 3.0e-211 739.2 515 69.9
Ah.03g133860 Amaranthus hybridus HOM05D005075 ORTHO05D007097 1.5e-202 710.3 701 55.5
unitig_747.g21130 Utricularia gibba HOM05D005075 ORTHO05D007097 1.8e-200 703.4 577 61.0
SHI17941 Sapria himalayana HOM05D005075 ORTHO05D007097 4.2e-189 665.6 637 55.3
Glyma.18G008800 Glycine max HOM05D005075 ORTHO05D007097 1.5e-178 630.6 430 70.7
Mapoly0042s0063 Marchantia polymorpha HOM05D005075 ORTHO05D007097 5.4e-176 622.1 660 49.2
SMO356G0356 Selaginella moellendorffii HOM05D005075 ORTHO05D007097 1.6e-175 620.5 670 49.1
SEGI_08672 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 6.6e-150 535.4 406 63.3
CiPaw.05G114700 Carya illinoinensis HOM05D005075 ORTHO05D007097 1.5e-146 524.2 378 68.8
HPP92_001259 Vanilla planifolia HOM05D005075 ORTHO05D007097 5.8e-146 522.3 369 67.8
Pp3c26_6380 Physcomitrium patens HOM05D005075 ORTHO05D007097 2.4e-139 500.4 501 49.9
CAN.G2246.1 Capsicum annuum HOM05D005075 ORTHO05D007097 1.6e-135 487.6 393 62.8
AagrBONN_evm.TU.Sc2ySwM_228.4178 Anthoceros agrestis HOM05D005075 ORTHO05D007097 7.1e-120 435.6 442 50.7
TPR.G492 Trifolium pratense HOM05D005075 ORTHO05D007097 8.7e-118 428.7 324 64.8
TPR.G9414 Trifolium pratense HOM05D005075 ORTHO05D007097 2.9e-113 413.7 344 59.9
HPP92_001244 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.2e-111 408.3 310 64.2
Os01g0901700 Oryza sativa ssp. japonica HOM05D005075 ORTHO05D007097 2.2e-105 387.5 295 62.4
CiPaw.05G114800 Carya illinoinensis HOM05D005075 ORTHO05D007097 3.1e-99 367.1 277 64.3
MCO06G130 Micromonas commoda HOM05D005075 ORTHO05D007097 5.2e-94 349.7 806 33.7
SEGI_28928 Sequoiadendron giganteum HOM05D005075 ORTHO05D007097 2.6e-90 337.4 356 50.3
Actinidia08085 Actinidia chinensis HOM05D005075 ORTHO05D007097 1.5e-88 331.6 323 57.0
PGSC0003DMG400021087 Solanum tuberosum HOM05D005075 ORTHO05D007097 1.5e-85 321.6 434 42.4
HPP92_001258 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.5e-80 305.1 282 56.7
Haze_02705 Corylus avellana HOM05D005075 ORTHO05D007097 7.2e-80 302.8 233 65.7
CBR_g21048 Chara braunii HOM05D000019 ORTHO05D000002 6.1e-71 273.1 386 39.6
Cre14.g630895 Chlamydomonas reinhardtii HOM05D005075 ORTHO05D007097 8.8e-70 269.2 662 32.5
Atru.chr11.2265 Acer truncatum HOM05D005075 ORTHO05D007097 4.3e-64 250.4 427 37.0
PRCOL_00001291 Prasinoderma coloniale HOM05D005075 ORTHO05D007097 7.5e-61 239.6 573 31.6
Atru.chr12.1465 Acer truncatum HOM05D005075 ORTHO05D007097 3.1e-46 191.0 355 39.2
Atru.chr11.2253 Acer truncatum HOM05D005075 ORTHO05D007097 4.6e-42 177.2 284 37.7
MBI07_g43659_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.6e-37 161.4 137 60.6
Actinidia30671 Actinidia chinensis HOM05D005075 ORTHO05D007097 4.4e-37 160.6 111 74.8
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 6.4e-36 156.8 133 58.6
MBI05_g16127_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 9.2e-35 152.9 215 43.3
MD16G1112300 Malus domestica HOM05D005075 ORTHO05D007097 1.2e-34 152.5 103 71.8
MBI18_g19470_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D007097 2.3e-33 148.3 223 41.3
MBI18_g03939_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.3e-32 144.4 220 41.8
AagrBONN_evm.TU.Sc2ySwM_228.4177 Anthoceros agrestis HOM05D005075 ORTHO05D007097 5.3e-22 110.5 89 58.4
Actinidia30670 Actinidia chinensis HOM05D005075 ORTHO05D007097 9.0e-22 109.8 123 49.6
Atru.chr11.2251 Acer truncatum HOM05D005075 ORTHO05D007097 1.1e-19 102.8 71 66.2
HPP92_001243 Vanilla planifolia HOM05D005075 ORTHO05D007097 1.3e-17 95.9 89 49.4
Cfa026038 Carpinus fangiana HOM05D005075 ORTHO05D007097 8.1e-15 86.7 112 38.4
COL.COLO4_15613 Corchorus olitorius HOM05D005075 ORTHO05D162910 3.1e-14 84.7 423 23.9
MBI16_g25874_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.3e-12 79.3 75 54.7
MD16G1112100 Malus domestica HOM05D005075 ORTHO05D037935 6.4e-12 77.0 60 66.7
MBI13_g10206_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 8.4e-12 76.6 46 71.7
MBI18_g33166_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 2.4e-11 75.1 53 60.4
MBI18_g47010_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 5.5e-11 73.9 105 42.9
Cfa026189 Carpinus fangiana HOM05D002287 ORTHO05D123242 7.1e-11 73.6 68 51.5
MD16G1112400 Malus domestica HOM05D005075 ORTHO05D007097 7.1e-11 73.6 154 37.0
MBI18_g03943_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 1.6e-10 72.4 50 64.0
MBI18_g06981_MAGBIO Magnolia biondii HOM05D005075 ORTHO05D020846 3.5e-10 71.2 46 67.4
Cfa025560 Carpinus fangiana HOM05D005075 ORTHO05D122628 7.9e-10 70.1 60 55.0
Atru.chr11.2270 Acer truncatum HOM05D005075 ORTHO05D037935 1.9e-08 65.5 53 64.2
Sabra10G0048500 Salix brachista HOM05D005075 ORTHO05D007097 3.3e-08 64.7 44 75.0
Pp3s34_300 Physcomitrium patens HOM05D000549 ORTHO05D006202 5.6e-08 63.9 247 30.0


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