Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01435 Aquilegia oxysepala HOM05D003681 ORTHO05D004703 0.0e+00 1425.2 746 100.0
TAR374G1530 Trochodendron aralioides HOM05D003681 ORTHO05D004703 0.0e+00 1094.7 747 77.0
TAR622G1195 Trochodendron aralioides HOM05D003681 ORTHO05D004703 5.6e-309 1063.9 749 74.9
GSVIVG01001851001 Vitis vinifera HOM05D003681 ORTHO05D004703 1.1e-304 1049.7 750 74.3
Dinv25694 Davidia involucrata HOM05D003681 ORTHO05D004703 3.5e-303 1044.6 750 74.8
Cpa.g.sc130.41 Carica papaya HOM05D003681 ORTHO05D004703 3.0e-302 1041.6 750 74.3
Dinv33384 Davidia involucrata HOM05D003681 ORTHO05D004703 3.9e-302 1041.2 750 74.9
Nn4g22444 Nelumbo nucifera HOM05D003681 ORTHO05D004703 5.1e-302 1040.8 753 74.8
QL02p072923 Quercus lobata HOM05D003681 ORTHO05D004703 4.3e-301 1037.7 750 73.3
Actinidia18423 Actinidia chinensis HOM05D003681 ORTHO05D004703 3.1e-299 1031.6 749 74.1
Atru.chr6.2486 Acer truncatum HOM05D003681 ORTHO05D004703 1.9e-296 1022.3 750 73.2
PSO017G2495 Papaver somniferum HOM05D003681 ORTHO05D004703 3.2e-296 1021.5 757 73.1
CiPaw.04G033000 Carya illinoinensis HOM05D003681 ORTHO05D004703 7.8e-295 1016.9 750 72.8
Actinidia16950 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.5e-293 1011.9 749 73.2
MD09G1017400 Malus domestica HOM05D003681 ORTHO05D004703 2.1e-292 1008.8 749 72.2
CSS0025950 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 2.4e-291 1005.4 750 72.3
TAR371G0788 Trochodendron aralioides HOM05D003681 ORTHO05D004703 1.9e-288 995.7 747 71.8
Prupe.3G299500 Prunus persica HOM05D003681 ORTHO05D004703 3.2e-288 995.0 749 71.2
Ciclev10014307m.g Citrus clementina HOM05D003681 ORTHO05D004703 4.2e-288 994.6 736 72.0
Thecc.04G027500 Theobroma cacao HOM05D003681 ORTHO05D004703 7.1e-288 993.8 749 71.2
MD17G1018200 Malus domestica HOM05D003681 ORTHO05D004703 2.7e-287 991.9 748 71.7
CiPaw.03G050400 Carya illinoinensis HOM05D003681 ORTHO05D004703 3.5e-287 991.5 750 71.5
Eucgr.I01693 Eucalyptus grandis HOM05D003681 ORTHO05D004703 2.3e-286 988.8 748 71.1
CANSAT64G2654 Cannabis sativa HOM05D003681 ORTHO05D004703 3.0e-286 988.4 755 70.3
Haze_14813 Corylus avellana HOM05D003681 ORTHO05D004703 7.3e-285 983.8 760 70.1
PSO478G5006 Papaver somniferum HOM05D003681 ORTHO05D004703 2.1e-284 982.2 752 72.1
Duzib187G0106 Durio zibethinus HOM05D003681 ORTHO05D004703 6.2e-284 980.7 748 69.9
Cfa007279 Carpinus fangiana HOM05D003681 ORTHO05D004703 1.4e-283 979.5 719 72.5
Gorai.006G038600 Gossypium raimondii HOM05D003681 ORTHO05D004703 3.1e-283 978.4 767 69.8
Gohir.D09G033600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 6.9e-283 977.2 767 69.6
Manes.15G156300 Manihot esculenta HOM05D003681 ORTHO05D004703 6.9e-283 977.2 750 70.7
PGR142G3554 Punica granatum HOM05D003681 ORTHO05D004703 2.0e-282 975.7 752 69.9
Manes.17G107300 Manihot esculenta HOM05D003681 ORTHO05D004703 9.9e-282 973.4 751 69.9
CsaV3_3G027310 Cucumis sativus L. HOM05D003681 ORTHO05D004703 6.4e-281 970.7 749 70.6
TWI12G0555 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 1.4e-280 969.5 750 69.3
Phvul.004G057300 Phaseolus vulgaris HOM05D003681 ORTHO05D004703 1.9e-280 969.1 754 70.0
MBI11_g11079_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 3.2e-280 968.4 754 68.4
Gohir.A09G033400 Gossypium hirsutum HOM05D003681 ORTHO05D004703 4.2e-280 968.0 767 69.1
Lj7A605G77 Lonicera japonica HOM05D003681 ORTHO05D004703 9.3e-280 966.8 741 72.2
Potri.001G337700 Populus trichocarpa HOM05D003681 ORTHO05D004703 9.3e-280 966.8 748 70.7
Potri.001G337600 Populus trichocarpa HOM05D003681 ORTHO05D004703 2.7e-279 965.3 749 71.0
ClCG05G013220 Citrullus lanatus HOM05D003681 ORTHO05D004703 3.5e-279 964.9 749 70.2
Gohir.A11G065000 Gossypium hirsutum HOM05D003681 ORTHO05D004703 3.5e-279 964.9 749 69.3
Sed0015235 Sechium edule HOM05D003681 ORTHO05D004703 6.0e-279 964.1 748 70.2
TWI36G0744 Tripterygium wilfordii HOM05D003681 ORTHO05D004703 7.8e-279 963.8 748 69.1
Sc03g0006880 Simmondsia chinensis HOM05D003681 ORTHO05D004703 3.0e-278 961.8 748 70.2
THA.LOC104805345 Tarenaya hassleriana HOM05D003681 ORTHO05D004703 5.1e-278 961.1 750 69.1
CSS0035050 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.5e-277 959.5 749 69.6
Glyma.19G077600 Glycine max HOM05D003681 ORTHO05D004703 1.3e-276 956.4 751 69.9
RcHm_v2.0_Chr2g0174171 Rosa chinensis HOM05D003681 ORTHO05D004703 1.3e-276 956.4 750 70.3
Glyma.05G073400 Glycine max HOM05D003681 ORTHO05D004703 1.6e-276 956.1 751 69.4
Thhalv10027657m.g Eutrema salsugineum HOM05D003681 ORTHO05D004703 8.1e-276 953.7 748 69.0
VMungo0464G1197 Vigna mungo HOM05D003681 ORTHO05D004703 1.8e-275 952.6 749 69.3
Aa31LG9G900 Aethionema arabicum HOM05D003681 ORTHO05D004703 2.4e-275 952.2 751 68.3
AT5G40740 Arabidopsis thaliana HOM05D003681 ORTHO05D004703 4.0e-275 951.4 749 69.4
Sp7g01150 Schrenkiella parvula HOM05D003681 ORTHO05D004703 6.9e-275 950.7 748 68.4
BraA04t17035Z Brassica rapa HOM05D003681 ORTHO05D004703 1.5e-274 949.5 749 68.4
Carub.0007s3474 Capsella rubella HOM05D003681 ORTHO05D004703 2.6e-274 948.7 749 68.6
COL.COLO4_29274 Corchorus olitorius HOM05D003681 ORTHO05D004703 5.8e-274 947.6 740 68.2
AL7G49000 Arabidopsis lyrata HOM05D003681 ORTHO05D004703 9.9e-274 946.8 749 69.2
CARHR213770 Cardamine hirsuta HOM05D003681 ORTHO05D004703 1.7e-273 946.0 750 68.8
arahy.Tifrunner.gnm1.ann1.0QF2GW Arachis hypogaea HOM05D003681 ORTHO05D004703 2.9e-273 945.3 749 68.6
CAN.G473.58 Capsicum annuum HOM05D003681 ORTHO05D004703 1.1e-272 943.3 750 69.2
PGSC0003DMG400006971 Solanum tuberosum HOM05D003681 ORTHO05D004703 1.1e-272 943.3 749 69.0
BraA07t29742Z Brassica rapa HOM05D003681 ORTHO05D004703 1.9e-272 942.6 750 68.5
Hma1.2p1_0279F.1_g112260 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 4.2e-272 941.4 794 67.6
BolC6t37131H Brassica oleracea HOM05D003681 ORTHO05D004703 7.1e-272 940.6 750 68.4
A04p13760 Brassica napus HOM05D003681 ORTHO05D004703 9.3e-272 940.3 751 68.2
Gohir.D11G069300 Gossypium hirsutum HOM05D003681 ORTHO05D004703 2.7e-271 938.7 749 68.1
Gorai.007G074100 Gossypium raimondii HOM05D003681 ORTHO05D004703 6.0e-271 937.6 749 68.2
Lj2g0006828 Lotus japonicus HOM05D003681 ORTHO05D004703 7.9e-271 937.2 751 68.4
Gohir.D10G085200 Gossypium hirsutum HOM05D003681 ORTHO05D004703 1.0e-270 936.8 749 67.3
BolC4t26356H Brassica oleracea HOM05D003681 ORTHO05D004703 1.3e-270 936.4 749 67.8
C04p47540 Brassica napus HOM05D003681 ORTHO05D004703 1.8e-270 936.0 749 68.0
FvH4_6g52640 Fragaria vesca HOM05D003681 ORTHO05D004703 6.7e-270 934.1 750 69.3
Gorai.011G093100 Gossypium raimondii HOM05D003681 ORTHO05D004703 8.7e-270 933.7 749 67.3
Sopen02g017120 Solanum pennellii HOM05D003681 ORTHO05D004703 1.5e-269 932.9 751 68.3
A07p20510 Brassica napus HOM05D003681 ORTHO05D004703 3.3e-269 931.8 750 68.0
BcaB02g07929 Brassica carinata HOM05D003681 ORTHO05D004703 9.6e-269 930.2 750 68.0
Sed0021158 Sechium edule HOM05D003681 ORTHO05D004703 1.6e-268 929.5 749 68.5
Sabra16G0218500 Salix brachista HOM05D003681 ORTHO05D004703 2.8e-268 928.7 750 68.5
vmacro05923 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 4.8e-268 927.9 738 69.5
FAN14G5093 Fragaria x ananassa HOM05D003681 ORTHO05D004703 6.2e-268 927.5 768 67.7
PGSC0003DMG400020227 Solanum tuberosum HOM05D003681 ORTHO05D004703 3.1e-267 925.2 748 68.7
C06p19360 Brassica napus HOM05D003681 ORTHO05D004703 2.0e-266 922.5 750 67.5
BcaC08g44481 Brassica carinata HOM05D003681 ORTHO05D004703 2.6e-266 922.2 750 67.5
CAN.G1057.25 Capsicum annuum HOM05D003681 ORTHO05D004703 2.6e-266 922.2 750 68.3
vmacro18313 Vaccinium macrocarpon HOM05D003681 ORTHO05D004703 1.0e-265 920.2 747 66.9
Cc07_g00400 Coffea canephora HOM05D003681 ORTHO05D004703 2.2e-265 919.1 748 67.8
MSTRG.3111 Avicennia marina HOM05D003681 ORTHO05D004703 6.5e-265 917.5 750 68.4
FAN09G4630 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.1e-264 916.8 768 67.1
FAN02G4174 Fragaria x ananassa HOM05D003681 ORTHO05D004703 1.4e-264 916.4 750 68.4
Nitab4.5_0000040g0490 Nicotiana tabacum HOM05D003681 ORTHO05D004703 9.3e-264 913.7 753 67.3
Sopen02g038450 Solanum pennellii HOM05D003681 ORTHO05D004703 2.7e-263 912.1 750 68.1
FAN05G4404 Fragaria x ananassa HOM05D003681 ORTHO05D004703 3.5e-263 911.8 795 65.4
Solyc02g093810.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 4.6e-263 911.4 750 68.1
Psat1g082400 Pisum sativum HOM05D003681 ORTHO05D004703 1.8e-262 909.4 749 66.6
Hund06716 Selenicereus undatus HOM05D003681 ORTHO05D004703 1.1e-261 906.7 736 68.5
Lalb_Chr02g0157941 Lupinus albus HOM05D003681 ORTHO05D004703 1.5e-261 906.4 746 66.1
CSS0007013 Camellia sinensis var. sinensis HOM05D003681 ORTHO05D004703 1.9e-261 906.0 705 69.2
Solyc02g067990.3 Solanum lycopersicum HOM05D003681 ORTHO05D004703 1.9e-261 906.0 734 67.7
Medtr6g022730 Medicago truncatula HOM05D003681 ORTHO05D004703 9.6e-261 903.7 750 66.5
EL10Ac4g08610 Beta vulgaris HOM05D003681 ORTHO05D004703 1.6e-260 902.9 735 67.1
Peaxi162Scf00420g00351 Petunia axillaris HOM05D003681 ORTHO05D004703 2.1e-260 902.5 733 67.3
Migut.H00059 Erythranthe guttata HOM05D003681 ORTHO05D004703 4.8e-260 901.4 747 66.7
BcaB06g27549 Brassica carinata HOM05D003681 ORTHO05D004703 1.5e-258 896.3 750 66.1
SGA_v2.0_scaffold18G08242 Striga asiatica HOM05D003681 ORTHO05D004703 3.8e-257 891.7 764 65.7
Rhsim10G0011100 Rhododendron simsii HOM05D003681 ORTHO05D004703 1.1e-256 890.2 742 66.8
AUR62036017 Chenopodium quinoa HOM05D003681 ORTHO05D004703 2.5e-256 889.0 733 67.0
SalBow1G2960 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.2e-255 886.7 733 67.1
SalBow1G7977 Salvia bowleyana HOM05D003681 ORTHO05D004703 1.2e-255 886.7 733 67.1
Sabra16G0218400 Salix brachista HOM05D003681 ORTHO05D004703 3.5e-255 885.2 733 66.8
HanXRQChr07g0199161 Helianthus annuus HOM05D003681 ORTHO05D004703 5.1e-254 881.3 749 66.6
Nitab4.5_0008718g0020 Nicotiana tabacum HOM05D003681 ORTHO05D004703 4.3e-253 878.2 739 66.2
Actinidia36165 Actinidia chinensis HOM05D003681 ORTHO05D004703 9.7e-253 877.1 733 66.2
Oeu050433.3 Olea europaea HOM05D003681 ORTHO05D004703 1.3e-252 876.7 758 64.6
Rhsim08G0046300 Rhododendron simsii HOM05D003681 ORTHO05D004703 7.7e-250 867.5 758 64.6
Sc03g0007020 Simmondsia chinensis HOM05D003681 ORTHO05D004703 7.7e-250 867.5 746 65.4
Nitab4.5_0001863g0130 Nicotiana tabacum HOM05D003681 ORTHO05D004703 3.8e-249 865.1 734 65.3
Oeu058755.3 Olea europaea HOM05D003681 ORTHO05D004703 6.5e-249 864.4 791 62.2
Lalb_Chr21g0317601 Lupinus albus HOM05D003681 ORTHO05D004703 5.5e-248 861.3 747 64.1
ECA238G4183 Erigeron canadensis HOM05D003681 ORTHO05D004703 4.6e-247 858.2 726 66.0
Ca_04403_v3 Cicer arietinum L. HOM05D003681 ORTHO05D004703 1.4e-246 856.7 733 64.7
Peaxi162Scf00080g01724 Petunia axillaris HOM05D003681 ORTHO05D004703 1.7e-244 849.7 734 64.9
AUR62035509 Chenopodium quinoa HOM05D003681 ORTHO05D004703 5.0e-241 838.2 726 65.0
SGA_v2.0_scaffold135G34941 Striga asiatica HOM05D003681 ORTHO05D004703 7.4e-237 824.3 782 61.5
Lj1g0019639 Lotus japonicus HOM05D003681 ORTHO05D004703 3.8e-233 812.0 755 61.6
TPR.G36528 Trifolium pratense HOM05D003681 ORTHO05D004703 8.0e-231 804.3 805 58.5
Os02g0329300 Oryza sativa ssp. japonica HOM05D003681 ORTHO05D004703 1.8e-230 803.1 750 60.9
Lsat_1_v5_gn_2_93641 Lactuca sativa HOM05D003681 ORTHO05D004703 8.8e-230 800.8 761 61.5
CDE07G0234 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 5.7e-229 798.1 756 58.3
Gohir.A10G160600 Gossypium hirsutum HOM05D003681 ORTHO05D004703 9.4e-224 780.8 555 74.4
ATR0824G011 Amborella trichopoda HOM05D003681 ORTHO05D004703 1.4e-219 766.9 728 60.4
TAR374G1355 Trochodendron aralioides HOM05D003681 ORTHO05D004703 2.5e-216 756.1 440 87.0
HPP92_006269 Vanilla planifolia HOM05D003681 ORTHO05D004703 1.2e-215 753.8 749 59.0
Zm00001eb235200 Zea mays HOM05D003681 ORTHO05D004703 4.4e-213 745.3 748 58.3
CDE04G2610 Ceratophyllum demersum HOM05D003681 ORTHO05D004703 4.4e-205 718.8 725 55.6
unitig_21.g20482 Utricularia gibba HOM05D003681 ORTHO05D004703 1.2e-189 667.5 773 54.3
unitig_744.g24365 Utricularia gibba HOM05D003681 ORTHO05D004703 3.3e-176 622.9 692 56.6
DCAR_011289 Daucus carota HOM05D003681 ORTHO05D004703 4.6e-170 602.4 591 60.9
QL07p006188 Quercus lobata HOM05D003681 ORTHO05D004703 2.1e-162 577.0 373 79.6
Mapoly0032s0042 Marchantia polymorpha HOM05D003681 ORTHO05D004703 3.9e-137 493.0 744 43.8
SMO367G0854 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 6.5e-132 475.7 682 45.0
QL09p045970 Quercus lobata HOM05D003681 ORTHO05D004703 7.9e-130 468.8 304 78.9
SHI03860 Sapria himalayana HOM05D003681 ORTHO05D004703 8.8e-129 465.3 439 59.5
Pp3c13_14720 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.4e-126 457.2 753 41.0
Pp3c13_14730 Physcomitrium patens HOM05D003681 ORTHO05D004703 2.4e-126 457.2 753 41.0
Pp3c3_25790 Physcomitrium patens HOM05D003681 ORTHO05D004703 3.6e-122 443.4 485 51.8
MELO3C014854.2 Cucumis melo HOM05D003681 ORTHO05D004703 1.0e-121 441.8 449 57.2
Pp3c4_18170 Physcomitrium patens HOM05D003681 ORTHO05D004703 1.0e-121 441.8 756 40.3
SEGI_13919 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 1.6e-106 391.3 350 60.3
Actinidia35791 Actinidia chinensis HOM05D003681 ORTHO05D004703 2.8e-90 337.4 287 67.2
RcHm_v2.0_Chr2g0109021 Rosa chinensis HOM05D002608 ORTHO05D004703 4.0e-89 333.6 283 64.0
MBI06_g35146_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D004703 3.7e-87 327.0 358 56.1
CBR_g66670 Chara braunii HOM05D003681 ORTHO05D004703 1.4e-86 325.1 594 37.4
SGA_v2.0_scaffold135G34947 Striga asiatica HOM05D003681 ORTHO05D004703 4.1e-86 323.6 259 68.7
Nn3g16565 Nelumbo nucifera HOM05D003681 ORTHO05D004703 1.7e-84 318.2 184 88.6
AagrBONN_evm.TU.Sc2ySwM_228.437 Anthoceros agrestis HOM05D003681 ORTHO05D004703 2.8e-66 257.7 447 41.2
SMO367G0212 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 1.4e-65 255.4 577 37.1
TAR629G3339 Trochodendron aralioides HOM05D003681 ORTHO05D030546 3.3e-59 234.2 643 31.7
RcHm_v2.0_Chr5g0047251 Rosa chinensis HOM05D002608 ORTHO05D021346 5.2e-57 226.9 468 37.8
SMO367G0417 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 6.6e-52 209.9 592 34.5
Lsat_1_v5_gn_3_79520 Lactuca sativa HOM05D003681 ORTHO05D004703 3.7e-42 177.6 249 47.4
RcHm_v2.0_Chr6g0248701 Rosa chinensis HOM05D002608 ORTHO05D013040 2.7e-37 161.4 109 72.5
SMO275G0043 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 3.5e-37 161.0 131 66.4
RcHm_v2.0_Chr5g0045391 Rosa chinensis HOM05D003681 ORTHO05D004703 5.3e-33 147.1 95 71.6
RcHm_v2.0_Chr2g0096321 Rosa chinensis HOM05D003681 ORTHO05D004703 9.0e-33 146.4 95 71.6
DCAR_011288 Daucus carota HOM05D003681 ORTHO05D004703 8.4e-31 139.8 172 49.4
RcHm_v2.0_Chr2g0166591 Rosa chinensis HOM05D003681 ORTHO05D004703 4.2e-30 137.5 76 93.4
Hma1.2p1_0026F.1_g016370 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 4.6e-29 134.0 224 41.5
BcaC05g26953 Brassica carinata HOM05D003681 ORTHO05D024003 2.3e-28 131.7 72 86.1
C05p28020 Brassica napus HOM05D003681 ORTHO05D024003 2.3e-28 131.7 72 86.1
BolC5t31529H Brassica oleracea HOM05D003681 ORTHO05D024003 3.7e-26 124.4 72 84.7
SHI03859 Sapria himalayana HOM05D000105 ORTHO05D000023 5.9e-24 117.1 333 35.1
vmacro18312 Vaccinium macrocarpon HOM05D004367 ORTHO05D004937 4.6e-21 107.5 171 38.6
RcHm_v2.0_Chr6g0248711 Rosa chinensis HOM05D003681 ORTHO05D030546 1.9e-19 102.1 51 92.2
SEGI_23209 Sequoiadendron giganteum HOM05D003681 ORTHO05D004703 7.4e-19 100.1 277 35.0
Lsat_1_v5_gn_2_93681 Lactuca sativa HOM05D006130 ORTHO05D007491 8.2e-18 96.7 50 94.0
MBI02_g11376_MAGBIO Magnolia biondii HOM05D003681 ORTHO05D024003 2.4e-17 95.1 60 71.7
SMO275G0001 Selaginella moellendorffii HOM05D003681 ORTHO05D004703 2.9e-15 88.2 84 60.7
SEGI_03694 Sequoiadendron giganteum HOM05D003681 ORTHO05D024003 3.8e-15 87.8 60 65.0
SMO367G0834 Selaginella moellendorffii HOM05D003681 ORTHO05D030546 7.2e-14 83.6 85 55.3
ECA247G3396 Erigeron canadensis HOM05D003681 ORTHO05D004703 6.1e-13 80.5 65 61.5
Hma1.2p1_0006F.1_g004670 Hydrangea macrophylla HOM05D003681 ORTHO05D004703 7.9e-13 80.1 241 32.0
VMungo1127G0394 Vigna mungo HOM05D003681 ORTHO05D004703 1.2e-08 66.2 88 45.5


User provided reference genes

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