Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01382 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 3.1e-142 508.4 254 100.0
Nn4g22470 Nelumbo nucifera HOM05D004407 ORTHO05D005074 2.7e-53 213.0 200 58.5
MBI11_g29154_MAGBIO Magnolia biondii HOM05D004407 ORTHO05D005074 4.3e-51 205.7 206 53.9
Nn3g16588 Nelumbo nucifera HOM05D004407 ORTHO05D005074 4.7e-50 202.2 193 58.0
TAR622G1038 Trochodendron aralioides HOM05D004407 ORTHO05D005074 8.9e-49 198.0 200 57.0
Prupe.3G298600 Prunus persica HOM05D004407 ORTHO05D005074 6.0e-45 185.3 194 50.5
Haze_14799 Corylus avellana HOM05D002760 ORTHO05D003169 6.6e-44 181.8 200 51.0
QL02p073303 Quercus lobata HOM05D004407 ORTHO05D005074 1.1e-43 181.0 204 50.5
QL02p073308 Quercus lobata HOM05D004407 ORTHO05D005074 1.1e-43 181.0 204 50.5
Ciclev10017684m.g Citrus clementina HOM05D004407 ORTHO05D005074 1.5e-43 180.6 205 47.8
Solyc02g093710.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 7.3e-43 178.3 192 54.2
PSO063G0264 Papaver somniferum HOM05D004407 ORTHO05D005074 1.6e-42 177.2 225 45.3
PSO832G4071 Papaver somniferum HOM05D004407 ORTHO05D005074 1.6e-42 177.2 185 52.4
CiPaw.03G049400 Carya illinoinensis HOM05D004407 ORTHO05D005074 2.1e-42 176.8 204 48.5
Manes.15G155400 Manihot esculenta HOM05D004407 ORTHO05D005074 2.8e-42 176.4 220 44.1
Nitab4.5_0001863g0220 Nicotiana tabacum HOM05D004407 ORTHO05D005074 4.7e-42 175.6 214 48.1
PGR083G0262 Punica granatum HOM05D004407 ORTHO05D005074 6.2e-42 175.3 201 48.3
CSS0009144 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 8.1e-42 174.9 212 46.2
Actinidia05950 Actinidia chinensis HOM05D004407 ORTHO05D005074 2.3e-41 173.3 138 63.0
FvH4_6g52330 Fragaria vesca HOM05D004407 ORTHO05D005074 6.8e-41 171.8 183 52.5
TWI36G1179 Tripterygium wilfordii HOM05D004407 ORTHO05D005074 1.2e-40 171.0 187 51.3
Nitab4.5_0001031g0160 Nicotiana tabacum HOM05D004407 ORTHO05D005074 1.5e-40 170.6 212 48.1
Sopen02g038350 Solanum pennellii HOM05D004407 ORTHO05D005074 1.5e-40 170.6 193 52.8
TAR625G1142 Trochodendron aralioides HOM05D004407 ORTHO05D005074 1.5e-40 170.6 136 66.2
MD17G1019100 Malus domestica HOM05D004407 ORTHO05D005074 2.0e-40 170.2 195 49.7
PSO017G7028 Papaver somniferum HOM05D004407 ORTHO05D005074 2.6e-40 169.9 187 49.7
MD09G1018600 Malus domestica HOM05D004407 ORTHO05D005074 4.4e-40 169.1 196 50.0
Gorai.012G091100 Gossypium raimondii HOM05D004407 ORTHO05D005074 5.8e-40 168.7 199 45.2
PGSC0003DMG400012626 Solanum tuberosum HOM05D004407 ORTHO05D005074 5.8e-40 168.7 193 52.8
CAN.G473.50 Capsicum annuum HOM05D004407 ORTHO05D005074 2.2e-39 166.8 197 48.7
CANSAT64G2558 Cannabis sativa HOM05D004407 ORTHO05D005074 3.7e-39 166.0 210 46.2
Gohir.D04G080420 Gossypium hirsutum HOM05D004407 ORTHO05D005074 1.1e-38 164.5 199 44.2
FAN05G1079 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.4e-38 164.1 184 50.5
Rhsim10G0012400 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.4e-38 164.1 144 58.3
Eucgr.J02274 Eucalyptus grandis HOM05D004407 ORTHO05D005074 3.2e-38 162.9 203 47.3
Duzib187G1586 Durio zibethinus HOM05D004407 ORTHO05D005074 9.2e-38 161.4 125 61.6
Aa31LG2G5400 Aethionema arabicum HOM05D004407 ORTHO05D005074 1.6e-37 160.6 194 46.4
Ah.06g182110 Amaranthus hybridus HOM05D004407 ORTHO05D005074 1.6e-37 160.6 127 62.2
PSO407G0367 Papaver somniferum HOM05D004407 ORTHO05D005074 7.8e-37 158.3 142 58.5
Thecc.04G026300 Theobroma cacao HOM05D004407 ORTHO05D005074 1.0e-36 157.9 211 45.5
Oeu054661.1 Olea europaea HOM05D004407 ORTHO05D005074 1.7e-36 157.1 191 49.2
Cpa.g.sc130.51 Carica papaya HOM05D004407 ORTHO05D005074 3.9e-36 156.0 205 44.4
Cc07_g00320 Coffea canephora HOM05D004407 ORTHO05D005074 5.1e-36 155.6 221 43.0
Sabra16G0217100 Salix brachista HOM05D004407 ORTHO05D005074 1.1e-35 154.5 195 45.6
EL10Ac4g07679 Beta vulgaris HOM05D004407 ORTHO05D005074 1.5e-35 154.1 119 63.9
Aqoxy4G01774 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 1.9e-35 153.7 260 38.8
BolC4t26352H Brassica oleracea HOM05D004407 ORTHO05D005074 4.3e-35 152.5 206 42.7
Potri.001G336200 Populus trichocarpa HOM05D004407 ORTHO05D005074 4.3e-35 152.5 195 45.1
THA.LOC104805351 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 5.6e-35 152.1 206 43.7
THA.LOC104825308 Tarenaya hassleriana HOM05D004407 ORTHO05D005074 5.6e-35 152.1 200 44.0
Aqoxy5G03597 Aquilegia oxysepala HOM05D004407 ORTHO05D005074 7.3e-35 151.8 252 39.7
CARHR213820 Cardamine hirsuta HOM05D004407 ORTHO05D005074 7.3e-35 151.8 214 42.1
A04p13730 Brassica napus HOM05D004407 ORTHO05D005074 1.2e-34 151.0 222 41.0
BraA04t17032Z Brassica rapa HOM05D004407 ORTHO05D005074 2.8e-34 149.8 228 39.5
Gohir.A09G032000 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.8e-34 149.8 206 42.2
TAR374G1728 Trochodendron aralioides HOM05D004407 ORTHO05D005074 2.8e-34 149.8 180 50.0
Carub.0007s3479 Capsella rubella HOM05D004407 ORTHO05D005074 4.7e-34 149.1 214 42.1
Sc03g0006940 Simmondsia chinensis HOM05D004407 ORTHO05D005074 4.7e-34 149.1 204 42.2
Thhalv10028148m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 8.1e-34 148.3 215 40.9
Gorai.006G037000 Gossypium raimondii HOM05D004407 ORTHO05D005074 1.4e-33 147.5 124 57.3
Glyma.02G190900 Glycine max HOM05D004407 ORTHO05D005074 1.8e-33 147.1 184 47.8
Rhsim10G0012300 Rhododendron simsii HOM05D004407 ORTHO05D005074 1.8e-33 147.1 180 48.9
Sed0027888 Sechium edule HOM05D004407 ORTHO05D005074 1.8e-33 147.1 190 46.8
C04p47510 Brassica napus HOM05D004407 ORTHO05D005074 2.3e-33 146.7 140 54.3
Sc03g0006970 Simmondsia chinensis HOM05D004407 ORTHO05D005074 2.3e-33 146.7 204 42.2
Thecc.04G026400 Theobroma cacao HOM05D004407 ORTHO05D005074 6.8e-33 145.2 226 39.8
Sp7g01180 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.6e-32 143.3 131 54.2
RcHm_v2.0_Chr2g0173921 Rosa chinensis HOM05D004407 ORTHO05D005074 5.8e-32 142.1 160 49.4
VMungo1383G1696 Vigna mungo HOM05D004407 ORTHO05D005074 5.8e-32 142.1 179 46.4
Prupe.3G298500 Prunus persica HOM05D004407 ORTHO05D005074 9.9e-32 141.4 127 55.9
DCAR_015072 Daucus carota HOM05D004407 ORTHO05D005074 2.9e-31 139.8 142 52.1
Phvul.008G156900 Phaseolus vulgaris HOM05D004407 ORTHO05D005074 4.9e-31 139.0 178 47.2
Duzib264G0535 Durio zibethinus HOM05D004407 ORTHO05D005074 1.1e-30 137.9 178 44.9
DCAR_015074 Daucus carota HOM05D004407 ORTHO05D005074 4.1e-30 136.0 125 55.2
Aa31LG9G940 Aethionema arabicum HOM05D004407 ORTHO05D005074 5.4e-30 135.6 203 43.8
CsaV3_5G026800 Cucumis sativus L. HOM05D004407 ORTHO05D005074 1.2e-29 134.4 198 42.4
GSVIVG01003970001 Vitis vinifera HOM05D004407 ORTHO05D005074 1.2e-29 134.4 109 57.8
ClCG09G019590 Citrullus lanatus HOM05D004407 ORTHO05D005074 1.3e-28 131.0 197 39.6
COL.COLO4_29257 Corchorus olitorius HOM05D004407 ORTHO05D005074 1.1e-27 127.9 87 67.8
Ca_03872_v3 Cicer arietinum L. HOM05D004407 ORTHO05D005074 1.5e-27 127.5 180 45.6
SGA_v2.0_scaffold47G17536 Striga asiatica HOM05D004407 ORTHO05D005074 1.5e-27 127.5 180 39.4
Hma1.2p1_0279F.1_g112130 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.5e-27 126.7 117 56.4
Dinv25704 Davidia involucrata HOM05D004407 ORTHO05D005074 3.3e-27 126.3 199 40.2
Medtr1g051195 Medicago truncatula HOM05D004407 ORTHO05D005074 4.3e-27 125.9 184 46.7
CANSAT64G1834 Cannabis sativa HOM05D004407 ORTHO05D005074 7.3e-27 125.2 134 50.7
PGR083G1149 Punica granatum HOM05D004407 ORTHO05D005074 1.2e-26 124.4 137 44.5
MSTRG.24058 Avicennia marina HOM05D004407 ORTHO05D005074 2.1e-26 123.6 143 49.0
AL7G49050 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 2.8e-26 123.2 133 50.4
Sed0005342 Sechium edule HOM05D004407 ORTHO05D005074 2.8e-26 123.2 197 38.1
MELO3C021614.2 Cucumis melo HOM05D004407 ORTHO05D005074 8.1e-26 121.7 197 39.6
Sed0009704 Sechium edule HOM05D004407 ORTHO05D005074 8.1e-26 121.7 189 40.2
AT5G40690 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 1.1e-25 121.3 131 50.4
Psat0s1368g0080 Pisum sativum HOM05D004407 ORTHO05D005074 1.1e-25 121.3 150 48.0
PGSC0003DMG400006921 Solanum tuberosum HOM05D004407 ORTHO05D005074 1.1e-25 121.3 133 49.6
Thhalv10028030m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 1.8e-25 120.6 194 39.2
FAN14G0353 Fragaria x ananassa HOM05D004407 ORTHO05D005074 1.8e-25 120.6 102 60.8
Potri.001G338100 Populus trichocarpa HOM05D004407 ORTHO05D005074 1.8e-25 120.6 133 48.9
Sopen02g017070 Solanum pennellii HOM05D000413 ORTHO05D005074 3.1e-25 119.8 132 47.0
TPR.G1105 Trifolium pratense HOM05D004407 ORTHO05D005074 5.2e-25 119.0 178 44.4
BcaB02g07933 Brassica carinata HOM05D004407 ORTHO05D005074 6.9e-25 118.6 197 39.6
PGR083G0848 Punica granatum HOM05D004407 ORTHO05D005074 6.9e-25 118.6 150 43.3
Migut.K01432 Erythranthe guttata HOM05D004407 ORTHO05D005074 2.6e-24 116.7 221 35.7
Hma1.2p1_1484F.1_g286410 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 7.6e-24 115.2 90 62.2
Lsat_1_v5_gn_2_93521 Lactuca sativa HOM05D004407 ORTHO05D005074 1.3e-23 114.4 136 47.1
Hma1.2p1_1484F.1_g286386 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.7e-23 114.0 91 61.5
Hma1.2p1_0818F.1_g223530 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 2.2e-23 113.6 87 63.2
Peaxi162Scf00420g00249 Petunia axillaris HOM05D004407 ORTHO05D005074 2.9e-23 113.2 203 38.9
BcaB07g31285 Brassica carinata HOM05D004407 ORTHO05D005074 6.4e-23 112.1 142 46.5
Duzib187G1582 Durio zibethinus HOM05D004407 ORTHO05D005074 6.4e-23 112.1 226 34.1
AUR62020325 Chenopodium quinoa HOM05D004407 ORTHO05D005074 1.1e-22 111.3 136 47.1
Hma1.2p1_0818F.1_g223560 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.4e-22 110.9 91 60.4
TPR.G1219 Trifolium pratense HOM05D004407 ORTHO05D005074 2.4e-22 110.2 139 48.9
Hma1.2p1_0818F.1_g223550 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 4.2e-22 109.4 85 62.4
Gohir.A05G342300 Gossypium hirsutum HOM05D004407 ORTHO05D005074 9.3e-22 108.2 197 37.1
Hma1.2p1_0818F.1_g223510 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.3e-22 108.2 85 62.4
Hma1.2p1_1484F.1_g286420 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 9.3e-22 108.2 85 62.4
ECA238G3732 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.2e-21 107.8 198 38.9
Sabra16G0218800 Salix brachista HOM05D000111 ORTHO05D000134 2.1e-21 107.1 133 45.9
ECA238G3518 Erigeron canadensis HOM05D004407 ORTHO05D005074 1.0e-20 104.8 157 42.7
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.3e-20 104.4 84 59.5
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.3e-20 104.4 84 59.5
Hma1.2p1_1484F.1_g286390 Hydrangea macrophylla HOM05D004407 ORTHO05D005074 1.3e-20 104.4 85 60.0
BcaC04g22350 Brassica carinata HOM05D004407 ORTHO05D005074 1.7e-20 104.0 84 58.3
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.7e-20 104.0 84 58.3
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.7e-20 104.0 84 58.3
unitig_747.g21864 Utricularia gibba HOM05D004407 ORTHO05D005074 2.3e-20 103.6 203 39.9
HanXRQChr09g0255761 Helianthus annuus HOM05D004407 ORTHO05D005074 1.5e-19 100.9 132 45.5
Gohir.A11G065600 Gossypium hirsutum HOM05D004407 ORTHO05D005074 2.5e-19 100.1 207 32.9
CARHR025870 Cardamine hirsuta HOM05D004407 ORTHO05D005074 7.3e-19 98.6 138 44.9
C04p02920 Brassica napus HOM05D004407 ORTHO05D005074 4.8e-18 95.9 142 44.4
BolC4t21933H Brassica oleracea HOM05D004407 ORTHO05D005074 4.8e-18 95.9 142 44.4
Gohir.D11G069800 Gossypium hirsutum HOM05D004407 ORTHO05D005074 4.8e-18 95.9 209 32.1
A05p02450 Brassica napus HOM05D004407 ORTHO05D005074 8.1e-18 95.1 128 45.3
BraA05t19239Z Brassica rapa HOM05D004407 ORTHO05D005074 8.1e-18 95.1 128 45.3
Migut.H00046 Erythranthe guttata HOM05D004407 ORTHO05D005074 1.1e-17 94.7 137 46.7
BcaNung02830 Brassica carinata HOM05D004407 ORTHO05D005074 1.8e-17 94.0 137 44.5
PSO782G3492 Papaver somniferum HOM05D004407 ORTHO05D005074 1.8e-17 94.0 242 34.7
HanXRQChr14g0451031 Helianthus annuus HOM05D004407 ORTHO05D005074 2.4e-17 93.6 87 56.3
A05p02490 Brassica napus HOM05D004407 ORTHO05D005074 5.3e-17 92.4 139 41.0
BraA05t19242Z Brassica rapa HOM05D004407 ORTHO05D005074 5.3e-17 92.4 139 41.0
C04p02950 Brassica napus HOM05D004407 ORTHO05D005074 9.0e-17 91.7 140 42.9
BolC4t21935H Brassica oleracea HOM05D004407 ORTHO05D005074 9.0e-17 91.7 140 42.9
BcaNung02832 Brassica carinata HOM05D004407 ORTHO05D005074 2.0e-16 90.5 128 43.0
A05p02480 Brassica napus HOM05D004407 ORTHO05D005074 2.0e-16 90.5 140 42.1
BraA05t19241Z Brassica rapa HOM05D004407 ORTHO05D005074 2.0e-16 90.5 140 42.1
A05p02470 Brassica napus HOM05D004407 ORTHO05D005074 2.6e-16 90.1 128 43.0
Gorai.007G074900 Gossypium raimondii HOM05D004407 ORTHO05D005074 2.6e-16 90.1 215 30.2
Thhalv10019315m.g Eutrema salsugineum HOM05D004407 ORTHO05D005074 6.4e-15 85.5 140 39.3
C04p02940 Brassica napus HOM05D004407 ORTHO05D005074 8.4e-15 85.1 142 41.5
BolC4t21934H Brassica oleracea HOM05D004407 ORTHO05D005074 8.4e-15 85.1 142 41.5
BraA05t19240Z Brassica rapa HOM05D004407 ORTHO05D005074 1.1e-14 84.7 128 41.4
Sp4g23980 Schrenkiella parvula HOM05D004407 ORTHO05D005074 2.7e-13 80.1 131 40.5
SEGI_17639 Sequoiadendron giganteum HOM05D050174 ORTHO05D005074 6.0e-13 79.0 198 30.3
Solyc02g067935.1 Solanum lycopersicum HOM05D004407 ORTHO05D005074 6.0e-13 79.0 71 54.9
HPP92_009916 Vanilla planifolia HOM05D004407 ORTHO05D005074 1.8e-12 77.4 91 44.0
BcaNung02831 Brassica carinata HOM05D004407 ORTHO05D005074 3.0e-12 76.6 114 41.2
SGA_v2.0_scaffold154G37145 Striga asiatica HOM05D002760 ORTHO05D003169 8.7e-12 75.1 50 64.0
Lsat_1_v5_gn_4_184741 Lactuca sativa HOM05D004407 ORTHO05D005074 5.6e-11 72.4 138 37.0
Sp2g16550 Schrenkiella parvula HOM05D013829 ORTHO05D015952 5.6e-11 72.4 192 32.3
HPP92_009915 Vanilla planifolia HOM05D004407 ORTHO05D005074 9.6e-11 71.6 84 45.2
ECA232G1846 Erigeron canadensis HOM05D004407 ORTHO05D005074 2.1e-10 70.5 105 42.9
AT2G41730 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.8e-10 70.1 108 42.6
C07p36420 Brassica napus HOM05D013829 ORTHO05D015952 8.1e-10 68.6 191 30.9
AT5G24640 Arabidopsis thaliana HOM05D004407 ORTHO05D005074 2.4e-09 67.0 131 35.9
AL4G40040 Arabidopsis lyrata HOM05D004407 ORTHO05D005074 2.0e-08 63.9 133 37.6
BcaC06g33826 Brassica carinata HOM05D013829 ORTHO05D015952 5.8e-08 62.4 194 31.4
Medtr4g061650 Medicago truncatula HOM05D004407 ORTHO05D005074 1.7e-07 60.8 178 30.9
Carub.0005s0566 Capsella rubella HOM05D013829 ORTHO05D015952 4.9e-07 59.3 192 29.2
A06p41240 Brassica napus HOM05D013829 ORTHO05D015952 8.4e-07 58.5 198 28.8
BraA06t27048Z Brassica rapa HOM05D013829 ORTHO05D015952 8.4e-07 58.5 198 28.8
CARHR148680 Cardamine hirsuta HOM05D013829 ORTHO05D015952 1.4e-06 57.8 143 34.3
Mapoly0297s0001 Marchantia polymorpha HOM05D034947 ORTHO05D036670 2.4e-06 57.0 148 30.4
Pp3c27_1870 Physcomitrium patens HOM05D018410 ORTHO05D021325 7.1e-06 55.5 96 37.5


User provided reference genes

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