Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Aqoxy3G01342 Aquilegia oxysepala HOM05D001106 ORTHO05D000910 3.4e-132 475.3 297 100.0
Aqoxy3G01341 Aquilegia oxysepala HOM05D001106 ORTHO05D000910 4.4e-116 421.8 334 79.0
TAR622G0145 Trochodendron aralioides HOM05D001106 ORTHO05D000910 9.5e-18 95.1 203 39.9
Duzib147G1069 Durio zibethinus HOM05D001106 ORTHO05D000910 1.6e-17 94.4 197 40.1
Hma1.2p1_0279F.1_g112020 Hydrangea macrophylla HOM05D001106 ORTHO05D000910 2.0e-15 87.4 200 40.5
Actinidia05958 Actinidia chinensis HOM05D001106 ORTHO05D000910 3.4e-15 86.7 202 37.1
QL02p073497 Quercus lobata HOM05D001106 ORTHO05D000910 1.7e-14 84.3 214 36.0
Sopen02g038060 Solanum pennellii HOM05D001106 ORTHO05D000910 1.7e-14 84.3 191 37.2
CAN.G473.39 Capsicum annuum HOM05D001106 ORTHO05D000910 2.2e-14 84.0 177 38.4
Cpa.g.sc862.1 Carica papaya HOM05D001106 ORTHO05D000910 2.2e-14 84.0 173 39.3
MBI08_g04807_MAGBIO Magnolia biondii HOM05D001106 ORTHO05D000910 2.9e-14 83.6 191 34.6
Solyc02g093590.3 Solanum lycopersicum HOM05D001106 ORTHO05D000910 3.7e-14 83.2 170 38.2
Haze_14788 Corylus avellana HOM05D001106 ORTHO05D000910 4.9e-14 82.8 204 35.8
Actinidia36145 Actinidia chinensis HOM05D001106 ORTHO05D000910 6.4e-14 82.4 204 36.3
Ciclev10015864m.g Citrus clementina HOM05D001106 ORTHO05D000910 1.1e-13 81.6 202 32.7
Thecc.04G023900 Theobroma cacao HOM05D001106 ORTHO05D000910 2.4e-13 80.5 216 33.3
CiPaw.03G048100 Carya illinoinensis HOM05D001106 ORTHO05D000910 4.1e-13 79.7 227 36.1
TAR371G1296 Trochodendron aralioides HOM05D001106 ORTHO05D000910 7.0e-13 79.0 193 36.8
MSTRG.24053 Avicennia marina HOM05D001106 ORTHO05D000910 1.6e-12 77.8 176 36.4
Potri.001G339200 Populus trichocarpa HOM05D001106 ORTHO05D000910 1.6e-12 77.8 176 35.8
vmacro05900 Vaccinium macrocarpon HOM05D001106 ORTHO05D000910 1.6e-12 77.8 192 32.8
Rhsim10G0013100 Rhododendron simsii HOM05D001106 ORTHO05D000910 2.0e-12 77.4 206 33.0
SGA_v2.0_scaffold47G17530 Striga asiatica HOM05D001106 ORTHO05D000910 2.0e-12 77.4 181 36.5
BcaB08g36992 Brassica carinata HOM05D001106 ORTHO05D000910 4.6e-12 76.3 189 34.9
Cfa007305 Carpinus fangiana HOM05D001106 ORTHO05D000910 4.6e-12 76.3 203 34.5
PGSC0003DMG400012618 Solanum tuberosum HOM05D001106 ORTHO05D000910 4.6e-12 76.3 171 36.8
PSO478G1753 Papaver somniferum HOM05D001106 ORTHO05D000910 6.0e-12 75.9 201 37.3
Dinv25710 Davidia involucrata HOM05D001106 ORTHO05D000910 7.8e-12 75.5 188 36.2
Migut.K01424 Erythranthe guttata HOM05D001106 ORTHO05D000910 7.8e-12 75.5 201 32.8
Gohir.A09G031400 Gossypium hirsutum HOM05D001106 ORTHO05D000910 7.8e-12 75.5 196 34.2
FAN09G1933 Fragaria x ananassa HOM05D001106 ORTHO05D000910 1.3e-11 74.7 153 36.6
GSVIVG01003983001 Vitis vinifera HOM05D001106 ORTHO05D000910 1.3e-11 74.7 203 35.5
MD09G1019800 Malus domestica HOM05D001106 ORTHO05D000910 1.7e-11 74.3 174 31.6
PSO017G0608 Papaver somniferum HOM05D001106 ORTHO05D000910 1.7e-11 74.3 208 35.1
RhsimUnG0005000 Rhododendron simsii HOM05D001106 ORTHO05D000910 1.7e-11 74.3 211 30.3
ClCG09G019520 Citrullus lanatus HOM05D001106 ORTHO05D000910 2.3e-11 73.9 199 33.7
MELO3C021608.2 Cucumis melo HOM05D001106 ORTHO05D000910 2.3e-11 73.9 203 32.5
Gohir.D09G031500 Gossypium hirsutum HOM05D001106 ORTHO05D000910 2.3e-11 73.9 196 34.2
Nitab4.5_0000935g0190 Nicotiana tabacum HOM05D001106 ORTHO05D000910 2.3e-11 73.9 173 34.1
CiPaw.04G031600 Carya illinoinensis HOM05D001106 ORTHO05D000910 3.0e-11 73.6 233 33.0
MD17G1020400 Malus domestica HOM05D001106 ORTHO05D000910 3.0e-11 73.6 203 33.5
FAN05G0553 Fragaria x ananassa HOM05D001106 ORTHO05D000910 8.6e-11 72.0 124 38.7
TWI56G1198 Tripterygium wilfordii HOM05D001106 ORTHO05D000910 8.6e-11 72.0 173 32.4
unitig_748.g8691 Utricularia gibba HOM05D001106 ORTHO05D000910 8.6e-11 72.0 173 34.7
Aa31LG11G15160 Aethionema arabicum HOM05D001106 ORTHO05D000910 1.5e-10 71.2 199 33.7
CANSAT64G1585 Cannabis sativa HOM05D001106 ORTHO05D000910 1.9e-10 70.9 188 34.0
Duzib187G1470 Durio zibethinus HOM05D001106 ORTHO05D000910 1.9e-10 70.9 204 35.3
Manes.15G154300 Manihot esculenta HOM05D001106 ORTHO05D000910 1.9e-10 70.9 199 33.7
Oeu054650.1 Olea europaea HOM05D001106 ORTHO05D000910 1.9e-10 70.9 147 35.4
FAN14G1087 Fragaria x ananassa HOM05D001106 ORTHO05D000910 2.5e-10 70.5 124 37.9
Lj1g0026201 Lotus japonicus HOM05D001106 ORTHO05D000910 2.5e-10 70.5 180 34.4
Cc07_g00200 Coffea canephora HOM05D001106 ORTHO05D000910 3.3e-10 70.1 124 41.1
FvH4_6g52200 Fragaria vesca HOM05D001106 ORTHO05D000910 3.3e-10 70.1 124 37.9
Gorai.006G036400 Gossypium raimondii HOM05D001106 ORTHO05D000910 3.3e-10 70.1 195 33.3
Sed0008506 Sechium edule HOM05D001106 ORTHO05D000910 3.3e-10 70.1 191 34.0
Glyma.16G067000 Glycine max HOM05D001106 ORTHO05D000910 5.6e-10 69.3 161 34.2
Oeu038068.1 Olea europaea HOM05D001106 ORTHO05D000910 7.3e-10 68.9 196 32.7
FAN14G4037 Fragaria x ananassa HOM05D001106 ORTHO05D000910 9.5e-10 68.6 124 37.9
SalBow7G4716 Salvia bowleyana HOM05D001106 ORTHO05D000910 9.5e-10 68.6 191 33.0
Glyma.19G079600 Glycine max HOM05D001106 ORTHO05D000910 1.2e-09 68.2 167 34.1
FAN02G3931 Fragaria x ananassa HOM05D001106 ORTHO05D000910 2.1e-09 67.4 153 34.0
Atru.chr6.2463 Acer truncatum HOM05D001106 ORTHO05D000910 2.8e-09 67.0 112 40.2
BolC3t13261H Brassica oleracea HOM05D001106 ORTHO05D000910 2.8e-09 67.0 174 32.8
CsaV3_5G026860 Cucumis sativus L. HOM05D001106 ORTHO05D000910 2.8e-09 67.0 203 29.1
RcHm_v2.0_Chr2g0173701 Rosa chinensis HOM05D001106 ORTHO05D000910 2.8e-09 67.0 159 34.6
BcaB01g05115 Brassica carinata HOM05D001106 ORTHO05D000910 4.7e-09 66.2 174 32.8
C03p07600 Brassica napus HOM05D001106 ORTHO05D000910 4.7e-09 66.2 174 32.8
Lalb_Chr14g0362941 Lupinus albus HOM05D001106 ORTHO05D000910 6.2e-09 65.9 162 35.8
BcaNung03162 Brassica carinata HOM05D001106 ORTHO05D000910 8.0e-09 65.5 189 33.9
HanXRQChr17g0549411 Helianthus annuus HOM05D001106 ORTHO05D000910 1.1e-08 65.1 192 29.2
Peaxi162Scf00420g00155 Petunia axillaris HOM05D001106 ORTHO05D000910 1.1e-08 65.1 196 33.7
C02p06720 Brassica napus HOM05D001106 ORTHO05D000910 1.4e-08 64.7 191 32.5
BraA02t05216Z Brassica rapa HOM05D001106 ORTHO05D000910 2.3e-08 63.9 176 33.5
Lsat_1_v5_gn_0_5541 Lactuca sativa HOM05D001106 ORTHO05D000910 2.3e-08 63.9 197 32.0
arahy.Tifrunner.gnm1.ann1.857KFG Arachis hypogaea HOM05D001106 ORTHO05D000910 3.1e-08 63.5 159 35.8
A03p06580 Brassica napus HOM05D001106 ORTHO05D000910 4.0e-08 63.2 106 37.7
BraA03t09990Z Brassica rapa HOM05D001106 ORTHO05D000910 4.0e-08 63.2 106 37.7
Nitab4.5_0001031g0320 Nicotiana tabacum HOM05D001106 ORTHO05D000910 4.0e-08 63.2 109 39.4
CARHR198950 Cardamine hirsuta HOM05D001106 ORTHO05D000910 5.2e-08 62.8 190 32.6
Eucgr.I01705 Eucalyptus grandis HOM05D001106 ORTHO05D000910 5.2e-08 62.8 174 31.6
Sp6g29650 Schrenkiella parvula HOM05D001106 ORTHO05D000910 5.2e-08 62.8 120 37.5
Prupe.3G296700 Prunus persica HOM05D001106 ORTHO05D000910 6.8e-08 62.4 174 35.1
Sc07g0004320 Simmondsia chinensis HOM05D001106 ORTHO05D000910 6.8e-08 62.4 165 32.7
TWI12G0090 Tripterygium wilfordii HOM05D001106 ORTHO05D000910 6.8e-08 62.4 164 31.7
BcaC03g13495 Brassica carinata HOM05D001106 ORTHO05D000910 8.9e-08 62.0 176 32.4
A02p02460 Brassica napus HOM05D001106 ORTHO05D000910 8.9e-08 62.0 174 33.9
BolC2t06616H Brassica oleracea HOM05D001106 ORTHO05D000910 8.9e-08 62.0 176 32.4
DCAR_011276 Daucus carota HOM05D001106 ORTHO05D000910 8.9e-08 62.0 268 29.1
AL6G25080 Arabidopsis lyrata HOM05D001106 ORTHO05D000910 1.2e-07 61.6 150 34.7
AT5G14370 Arabidopsis thaliana HOM05D001106 ORTHO05D000910 1.2e-07 61.6 150 35.3
PGR142G0166 Punica granatum HOM05D001106 ORTHO05D000910 1.2e-07 61.6 199 33.7
Hund13018 Selenicereus undatus HOM05D001106 ORTHO05D000910 2.0e-07 60.8 183 33.3
arahy.Tifrunner.gnm1.ann1.FCSG49 Arachis hypogaea HOM05D001106 ORTHO05D000910 2.6e-07 60.5 159 35.2
Ca_13833_v3 Cicer arietinum L. HOM05D001106 ORTHO05D000910 2.6e-07 60.5 155 34.2
BcaC04g19037 Brassica carinata HOM05D001106 ORTHO05D000910 3.4e-07 60.1 153 34.6
C09p62790 Brassica napus HOM05D001106 ORTHO05D000910 3.4e-07 60.1 153 34.6
BolC9t59116H Brassica oleracea HOM05D001106 ORTHO05D000910 3.4e-07 60.1 153 34.6
Carub.0006s1255 Capsella rubella HOM05D001106 ORTHO05D000910 3.4e-07 60.1 150 34.0
Phvul.008G147400 Phaseolus vulgaris HOM05D001106 ORTHO05D000910 3.4e-07 60.1 166 30.7
BraA10t44479Z Brassica rapa HOM05D001106 ORTHO05D000910 5.8e-07 59.3 151 34.4
Hund20692 Selenicereus undatus HOM05D001106 ORTHO05D000910 7.5e-07 58.9 196 32.1
Nn4g22505 Nelumbo nucifera HOM05D001106 ORTHO05D000910 1.3e-06 58.2 110 37.3
BcaB01g06329 Brassica carinata HOM05D001106 ORTHO05D000910 1.7e-06 57.8 161 30.4
TPR.G1087 Trifolium pratense HOM05D001106 ORTHO05D000910 1.7e-06 57.8 160 33.1
A10p24150 Brassica napus HOM05D001106 ORTHO05D000910 3.7e-06 56.6 151 33.8
VMungo1383G1671 Vigna mungo HOM05D001106 ORTHO05D000910 4.9e-06 56.2 166 30.1
Thhalv10014044m.g Eutrema salsugineum HOM05D001106 ORTHO05D000910 6.4e-06 55.8 153 32.7


User provided reference genes

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